Taeniopygia guttata (zebra finch): 100227699
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Entry
100227699 CDS
T01082
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100227699 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tgu04812
]
100227699 (SPTBN1)
Cytoskeleton proteins [BR:
tgu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100227699 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
100227699 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
SLATT_6
PH_11
Motif
Other DBs
NCBI-GeneID:
100227699
NCBI-ProteinID:
XP_002199683
Ensembl:
ENSTGUG00000007183
UniProt:
A0A674GV67
LinkDB
All DBs
Position
3:83830652..83950554
Genome browser
AA seq
2359 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEK
LESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDANK
AELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQS
QARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILWV
GERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEV
IQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAG
LKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPPT
PEPKVAEDGDSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSKES
SPIPSPTSDRKAKSGVQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWHN
VYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGKR
EKDKEKDKEKRFSLFGKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacggtagcgacagattacgacaacattgaaatccaacagcagtacagtgat
gtcaacaaccgctgggatgtcgatgactgggacaatgagaacagttctgctcggctgttt
gagcgctcccggatcaaggccctggctgatgaacgtgaggcagttcagaagaagaccttc
acaaagtgggtgaattcccacttggctcgtgtgtcctgccgaattacagacctgtacact
gaccttcgagatgggaggatgctcatcaaactcctggaagtgctttcaggagagagactt
cctaaaccaactaaaggaaggatgcgcatccattgcctggagaatgtggataaagccctc
cagttcctgaaagagcaacgagtgcacctagaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggccttatttggaccattatcctgagattccagatccaa
gatattagtgttgaaactgaggacaacaaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaaaacagctgggtaccccaacgtcaatatccacaactttacaaca
agctggagggatgggatggcattcaatgcactgatccataagcacaggcctgatctgatt
gattttgacaaactgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaagctcctggaccctgaggatatcagtgtcgatcac
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagccttggctgttgaaggaaaacgtattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgatagaaaaatacgagtccctggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaatcgcaaattcgccaactctctggttggggtgcagcagcag
ctgcaggcattcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttactatccaaagcaaaatgagagccaacaatcagaaagtg
tacatgccgagggagggaaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacggagatttgatcgcaaagcagctatgagagaaacttggctgagtgaa
aatcaacgtcttgtttctcaggacaattttggctttgacctcccagcagtggaagctgcc
acaaagaagcatgaggccatcgagacggacatcgcggcgtacgaggagcgggttcaggcc
gtggtggcggtggcgaaggagcttgagactgaaaactaccatgatatcaaacgcatcact
gcaagaaaggacaatgttatccgcctgtgggagtatctcctggagctgctccgggcacgg
agacagcggctggagatgaaccttgggctgcagaagattttccaggaaatgctgtacatt
atggactggatggacgagatgaaggtgcttttgctgtcccaagactacggcaaacatttg
ttgggagttgaagacctgctgcagaaacatgctctggtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcctctgctcagaagtttgccactgatggagaaggt
tacaagccctgtgacccgcaggtgatcagggaccgcgtggctcacatggaattctgctac
caggagctctgccagcttgcagctgagcgccgtgcacgccttgaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaggagggctggatcagggagaaggagcagatt
ctgtcatctgatgactatgggaaggatctaaccagtgttgtccgactcttgagtaaacat
aaggcatttgaggatgagatgagtggccgcagtggccacttccagcaggcgataaaagaa
ggtgaagacatgattgcggaagagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggctaacctggagcagttatctgccattaggaagaaacggctg
gaggaagcctctctccttcaccagttccaggctgatgctgatgacattgatgcgtggatg
ttggacatcctcaagattgtctccagtaatgatgttggccatgatgaatattccactcag
tccttggtcaagaagcacaaagatgtggctgaagagatcgcgagctaccggccgaccatc
gactctcttcatgagcaggccaaggctctgccgcaggagcacgccgagtctccagatgtg
caaggcaggttgtccggaatcgaggagagatacaaagaggttgctgagctgacccggctg
cgtaaacaggccctgcaggataccctcgctctctataagatgttcagtgaggcagatgct
tgtgagctttggatcgatgaaaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacaggtttgaaagcttggagccagaaatgaacaac
caggcgtcccgtgtggctgtggtgaaccagattgccaggcagctgatgcacagtggccac
cccggggagaagatcaaagcacagcaagataaactcaacacaaggtggagtcagttcaga
gaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactaccat
cttgaatgtaatgaaaccaaatcctggatcagggaaaagactaaagtgattgaatccaca
caagacctgggtaacgacctggctggagtgatggccttgcagaggaagctgacgggcatg
gaacgggacctggtggccatcgaagccaagctcagtgacctgcaaaaggaggcagagaag
ctggaatcggagcatcctgaccaggcacaagccatcctttcacggcttgcagagatcaat
gatgtgtgggaagaaatgaagaccacgctgaagaaccgggaagagtccctgggagaggcc
agcaagctgcagcagttcctgagagatctggatgacttccagtcctggctctccagaaca
cagactgcaattgcctccgaagatatgcccaacaccctgacagaggctgagaagctgctc
actcagcacgagaatatcaagaatgaaatcaacaattacgaggaagattatcagaagatg
agggacatgggtgagatggtgacacaagggcaaactgatgctcagtacatgttcttacgc
cagcgcctacaggctttggacactggatggaatgagcttcacaaaatgtgggagaacagg
caaaatctcctttcccagtctcatgcctaccagctgtttctcagagataccaagcaagca
gaagctttccttaataatcaggagtatgttctggcacacacggagatgccaaccaccttg
gaaggagcagaagctgctattaaaaagcaggaggatttcatgaccaccatggatgccaat
gaagaaaagatcaatgcagttgtggagacgggcaggaggctcgttagtgatgggaacatt
aactctgataaaatccaggagaaagtggactctattgatgatagacataggaagaaccgt
gaagcagccagtgaacttttgatgagactgaaagataacagggatctccaaaagtttctt
caggattgccaagagctctccctctggatcaatgagaagatgctcacagcccaggatatg
tcctatgatgaggcgaggaacctgcacagcaaatggctgaagcatcaggcattcatggca
gagcttgcatccaacaaagagtggctggagaagattgaaaaggagggaatgcagctcatt
gcagagaaaccagagactgaggctgtggtgaaggagaagctgacaggtctccaccaaatg
tgggacgagcttgaatccaccacccagaccaaggctcagcgtctcttcgatgcaaacaag
gcagagctttttacccagagctgtgcagacctggataagtggctgaatggtttggagagc
caaatccagtcggatgactacggaaaagatctcaccagtgtcaacatcctgttgaagaag
cagcagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcaaagc
caggcaagggctttgagccaagagggcaagagcacagatgaagttgatggcaaacgcctt
actgtagaaaagaaattcttggagctgctggaacctttgaatgagagaaaggccaacctg
ctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgggtc
ggagagaggatgcccatagctacatctacggatcatggacacaacctccagactgtgcag
ctactaataaagaaaaatcagacccttcagaaagaaatccagggtcaccagcctcgtatc
gatgacatttttgagaggagtcagaacattatcacagagagcagccccaatgctgaagtc
attcagcagagacttgcagacttgaagcagctgtggaaccttctcattgaggagacggag
aagcgccacaagcgcctggaggagtctcacagggctcagcagtattacttcgatgcagcc
gaggctgaggcctggatgagtgagcaagagctctacatgatgtcagaagagaaagccaag
gatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaagctgtagaa
gattatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagataat
cacccagaaagcgagcgcatcagcatgcgccagtccaaggtggacaagctctatgcgggc
ctgaaggacctcgctgaggagaggaggggcaagctggatgagaggcaccggctgttccag
ctgaaccgcgaggtggatgacctggagcagtggattgctgaaagggaggtggtggcaggg
tcccacgagctgggtcaggactatgaacatgtcacgatgctgcaggagcggttccgggaa
ttcgcccgggacactgggaacattgggcaggagcgggtggatactgtcaaccacatggct
gatgaactcatcaactccggccactcggacgctgccacgatcgctgaatggaaggacgga
ctcaatgaggcctgggcagatctcctggagctcattgacacgagaacacaaatccttgca
gcctcttatgaactacacaaattttaccacgatgccaaggagatcttaggacgtatccaa
gacaaacataagaaactgcctgaggagcttggtagagaccaaaacacagtggaaacactg
cagagaatgcacacaacgtttgagcatgatatccaggccctgggcacccaggtacgacag
ctgcaggaggatgcagcgcgcctccaggctgcctacgctggggacaaggccgatgacatc
cagaagagggaaaacgaggtcctagaggcatggaaggcacttctggatgcctgtgagggc
cgtagggtgaggctggtggacacaggagacaaattccgcttcttcagcatggttcgggat
ctcatgctctggatggaagacgttatccggcagatagaagcccaggaaaagccaagggat
gtttcatctgtggaactcctcatgaacaatcaccaggggatcaaagcagaaattgatgcc
cgaaatgacagcttcactacgtgcattgagcttggcaagtctctgctggccaggaaacac
tatgcatctgaggagatcaaggaaaagctcctgcagctgacagaaaaaagaaaagaaatg
attgacaaatgggaagacagatgggagtggctgagactgattttggaggtgcatcagttc
tccagagatgcaagcgtggctgaggcctggctgctgggacaggagccctacctgtccagt
cgtgaaatagggcagagcgttgatgaggtggagaaattaatcaagcggcacgaagcgttt
gagaaatccgcagctacatgggacgagaggtttgcagcactggagagactgaccacactg
gaactgctagaggtgcgtcggcagcaagaggaggaggagcggaagaggcagccgcccact
ccggagcccaaggttgcagaggatggagactcccagcagcaatgggatgggacaaaagga
gaacaagtttcccaaaacggtttgccctcagaccaggaatctccacgggtggcagaaact
gcagaaaccaatgaaatggtcaatggagctgcagaacagaggacgagttccaaagagtcc
agtcccattccttccccgacgtcagaccgcaaagccaagagcggtgttcaggcccagact
gctgctaccctcccagccaaaacacaggagatcccctcagcccagatggagggcttctta
caccgcaagcatgagtgggagacacacagcaagaaagcttccagcaggtcatggcataat
gtgtactgtgtcataaacaaccaagagatgggcttctacaaggactcgaaagctgctgct
tctggcatcccttaccacaacgagatccccgtcagtctgaaggatgcagtctgcgaagta
gcggtcgattacaaaaagaagaagcatgtgttcaagctcagattgaccgatggcaatgaa
tacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggccatcacatca
gcaatctcttcagacaaaatcgaagtgtccccgaccacccagagcactccagcctccagc
cgtgcccagaccctgcctgccagtgtcacaataaccagcgagtccagccctggcaagcgg
gagaaagataaagagaaagacaaagagaaaagattcagcctttttggtaaaaagaagtga
DBGET
integrated database retrieval system
