Taeniopygia guttata (zebra finch): 100227811
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Entry
100227811 CDS
T01082
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100227811 (SAMD4A)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100227811 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
100227811
NCBI-ProteinID:
XP_030131107
Ensembl:
ENSTGUG00000013086
LinkDB
All DBs
Position
5:complement(58678024..58777630)
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AA seq
732 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLADCTELHILEG
EANNPGIINQWQQESKDKVISLLLTHLPLLKPGNIEAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSGGFGGQGRGRSDSLDYGQAHYYHQR
QNSDDKLNGWQNSRDSGISVSASSWQDKNLACENGHLPLYSSSSVPTTINTIGTSTSTIL
SGQTHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCIPSDHAPLSPQSSVASS
GSGGSEHLEDQPSARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLEGDILEGGNLRVPLQELHQMILTPIKAYSS
QNSSPEEHSRDVDSHHPSSLLGSDSQGSDCKDSAAAGMQQQHLPGCEGESGGAPLPEGDL
PGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTEIQKKRLLSWKQQVQKLF
RSFPRKSLLELSGYRQQRSRGFGQSNSLPTAGSAGAGLARRNPRQFQIPSRNLPTARLGL
LGPTGLLGTPQRSPAASPAILKQGRQNLWFANPGGSNSMPSRSHSSVQRTRSLPVHTSPQ
TMLMFQQPEFQVPVTEPDINNRLESLCLSMTEHALSGEHSLLLGLFQHVHAASAEPPSTC
PVPPKSWDRLWL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggttggcgtgctggccgggtggttcaagggctggaacgagtgc
gagcagactgttgcgctgctctccctgctcaaacgcgtcagccggacccaggctcgcttc
ctccagctctgcctcgagcattccctggcagactgcaccgagctccacatcctcgaaggg
gaggccaacaaccccggaatcattaaccagtggcaacaggaatccaaggacaaagtgatc
tccttgttgttaacccacctgcctttactgaaacccggcaacatcgaggcgaaagtcgag
tacatgaaactcttgcccaaaatcctggcgcactccatcgagcacaaccagcacatcgag
gagagcaggcagctgctgtcctacgccttgatccaccctgccacctccctggaggacagg
agcgccctggccatgtggctcaaccacctggaggaccgcacctcggggggtttcggcggg
cagggccgcggccgctccgactcgctggactacgggcaggctcactactatcaccaaaga
cagaactccgacgacaaactcaacgggtggcagaactctcgggactccggcatcagcgtc
agcgcttccagctggcaggataaaaatctggcctgtgagaacggccacctgcccctctac
tcctcctcctccgtccccaccaccatcaacaccatcggcactagcacaagcaccattctc
tcaggccagacacaccacagccctttgaaacgctctgtgtcccttaccccacccatgaat
gtgccaaaccaacctctaggacatggatggatgtctcatgaggacttacgagctagagga
ccccagtgcatcccttctgatcatgcccccctgtctccacaaagcagtgtagcctcttcg
ggaagtggtgggagtgaacatttagaagatcagccttctgctcgtaacacattccaggag
gaagggagtgggatgaaagatgtcccagcctggctgaagagcctccggctgcacaagtac
gccgccctcttctcccagatgacgtacgaggagatgatggccctcaccgaatgccagctc
gaggcacaaaatgttaccaaaggtgcaagacacaaaatagtcatcagtatccaaaagcta
aaagaaagacaaaacctgctcaaatctctagaaggggacatcctggaaggcggcaacttg
cgtgtcccgctgcaggagctacaccaaatgatcctcacccccatcaaagcctactcttcc
caaaactcgagcccggaggagcacagccgggacgtggactcgcaccacccctcctccctg
ctgggctcggacagccaaggctcggactgcaaggactccgcggcggccgggatgcagcag
cagcatctgccgggatgcgagggcgagtcgggaggggcccctttgcccgagggggacctg
cccgggcagttcacccgggtgatggggaaagtctgcacacaacttttagtttcccgaccc
gatgaagagaatataagttcctatttacagctcatagacaaatgtctaatccacgaggcg
tttacagagatccagaagaagcggctgctgtcatggaaacagcaggtgcagaaactcttt
cggtccttccctcggaaatccctcctggagctgtcaggctatcggcagcagaggagccga
ggctttggccagtccaactccctcccgacagccggatccgcgggggcagggctggcacgg
aggaacccccggcagttccagatcccctcccgaaacctccccacggcccggctggggctg
ctgggccccacggggctgctgggcaccccccagcgcagccctgccgccagccccgccatc
ctcaagcaaggcagacagaacctgtggtttgccaaccctgggggcagtaacagcatgccc
agccggagccacagctcggtgcagaggacgcgctcgctgccggtccacacgtccccgcag
accatgctgatgtttcagcagccagagttccaggtgccggtgactgaacctgacatcaac
aacaggctggagtccctgtgcctgagcatgacggagcacgcactcagcggtgagcattcc
ctcctcctggggctcttccagcacgtccacgccgcctctgctgagccccccagcacctgc
cccgtgccccccaaaagctgggacaggctgtggctgtga
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