Taeniopygia guttata (zebra finch): 100227883
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Entry
100227883 CDS
T01082
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
100227883 (TAF1B)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100227883 (TAF1B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Di19_C
DUF5816
Motif
Other DBs
NCBI-GeneID:
100227883
NCBI-ProteinID:
XP_002196295
Ensembl:
ENSTGUG00000013037
UniProt:
H0ZS29
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All DBs
Position
3:complement(14185250..14230296)
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AA seq
580 aa
AA seq
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MDEEDTRDFNERCAQCSEVNWGLTDGGRFYCRSCHNVTERTREVVNTDFITNSRVQSISK
GLKKQEKTDGGCEWYICEGFQLVLKKQVEALEALGVCPQMKDEILCNFWRCYLQKSKQAY
CKRPAGETIKSLSGCESSTDVDSDPERPSFLHLLSVSESEGDLQTDCSFASSVSKVSEST
SVYSGSVDGSLYLMKNQKEKLRMTMPMTLSFCYMALLWVREPITLSELLRFVVEGHIPYL
NVFQHFPEKMKLCGLDLKIFCVESWPVYEEVFNKMHELAAFLDLPRFPDITESCFLHPDM
LCMKYLMEANLPDELHNWTRRVVKKIGIGEVDFLTLMPGNKSTRKVKYDVLAAAVIVVVL
KLLFLLDDNYEWILSEFAEERNKNNTEGGPYFEFKKWYEVVKHSLDVEQKKLDEEKAKYL
WRCEKPLFYSIKNKSKVLKRRQMVVNLQNQFGKLSGSVQHAEKPNPSSFQLSWSEENRDG
SCFHGHSLKGILQEKRGLLTAMNPDYWLCTVKLCNEKLCGHLAHYREVEFPQSYHFVLRL
FSFLLRIQPSYIHDEVCMIEHKLFNKKLCKKLKYSSVLRK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggacacgagagattttaatgagcgctgtgctcagtgttcagaagtgaac
tggggtctcactgatggaggcagattttattgtagatcttgccacaacgttactgagaga
actagagaagttgtaaacactgattttattactaattcaagagtccaatcaatctccaaa
ggtttaaaaaagcaggaaaaaactgatggaggctgtgaatggtatatttgtgaaggcttt
cagcttgtactcaagaaacaagtggaagctctagaagcattaggagtatgtccacaaatg
aaggatgaaattctgtgcaatttttggaggtgttaccttcagaagagcaaacaggcatat
tgcaagagaccagctggggaaaccatcaaatcattatcaggatgtgagagcagtactgat
gtggacagtgatccagagagacccagctttctgcacttgctgtctgtctctgaaagtgag
ggggatctgcagaccgactgcagctttgcctcatcagtgagcaaggtctcagaaagcacc
tctgtgtactctggatcagtggatggcagcttgtatttaatgaagaaccaaaaggagaaa
ctgaggatgacgatgccaatgacactttcattttgttacatggcattgctctgggtgaga
gaaccaattacattgtccgagctcttaaggtttgttgttgaaggacatattccatatttg
aatgttttccagcattttccagagaaaatgaagctatgtggacttgatcttaagatcttt
tgtgtagagtcatggcctgtatatgaagaagtattcaacaaaatgcatgagcttgcagca
tttttagacctgcctcgttttccagatattacagaaagctgctttcttcatccagacatg
ctgtgcatgaagtacttgatggaagctaatttacctgatgaattgcataattggactcgt
cgagtggtgaaaaaaattggtattggagaagtggatttcctgactcttatgcctggaaat
aagtcaacaagaaaagtgaaatatgatgttcttgctgcagcagttattgtagttgtgctc
aaattattgtttttattagatgataattatgaatggatactttcagagtttgctgaagaa
agaaataaaaataacacagaagggggcccatattttgagttcaagaagtggtatgaggta
gtaaaacattccttggatgtggagcaaaagaaattggatgaagaaaaagccaagtatcta
tggagatgtgaaaagccattgttttattcaatcaagaataaatctaaagttctaaagaga
agacaaatggttgtgaacttacaaaatcagtttggcaagctgtctggttcggtgcaacat
gctgaaaagccaaatccttcaagttttcagttaagttggtctgaagaaaacagagatggg
agttgttttcatgggcatagcctgaagggaattttgcaagaaaaacgtggtttactgaca
gccatgaaccctgactattggctgtgtacagttaaactatgtaatgagaaattgtgtggt
catctggctcattacagagaagtggagtttccccagagttaccattttgtactgagattg
ttctcttttcttctgaggattcaaccctcttatatccatgatgaggtgtgtatgatagaa
cacaaactttttaataagaaactctgtaaaaaactaaaatacagctcagtgctaaggaag
taa
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