Taeniopygia guttata (zebra finch): 100227889
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Entry
100227889 CDS
T01082
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
KO
K06099
cold shock domain protein A
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100227889 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100227889 (YBX3)
03041 Spliceosome [BR:
tgu03041
]
100227889 (YBX3)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
100227889 (YBX3)
Spliceosome [BR:
tgu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100227889 (YBX3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
Bim_N
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
100227889
NCBI-ProteinID:
XP_032602239
LinkDB
All DBs
Position
1A:62380457..62397646
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AA seq
286 aa
AA seq
DB search
MSEAPETSAASPAPAAPPVPAAAAAPPAPAAPDAAPKSPASASAPGAAVAEAAPGAAAAA
TTAAAESAKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSV
GDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYFGRRRGPPRSQGGE
GEIKDGVTEGGQLQQVHRNPTYRPRYRRGPPRPRPAPVTGEAENKENHHEANAMSQQPLR
RGYRRPYNYRRRPRPASAPAQEGKETKATETPAENPAPVTEQSGAE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgccggagaccagcgccgccagccccgcgcccgccgcgccgcccgtcccg
gccgcggccgccgcgccgcccgcgcccgccgccccggacgccgctcccaagagccccgcc
agcgcctccgcgccgggtgcggctgtcgctgaggcggcccccggcgccgccgccgcagcc
acgaccgcggcggccgagtcggcgaagaaagtgctggccaccaaagttcttggcacagtc
aagtggttcaacgtcagaaatggatatggctttatcaacagaaatgataccaaagaagat
gtgtttgttcatcagacggcgataaagaaaaacaatccacggaagtacctgcgcagtgtt
ggcgatggagagaccgtagagtttgatgtggttgagggagagaagggtgcagaagcagct
aatgtcactggtccagatggagtccccgtggaaggcagccgctacgctgcggaccggcgc
cgctatcgacggggctactttggccgacgccggggcccacctcggagtcagggtggtgag
ggagaaatcaaggatggggtcacagaaggaggacaacttcagcaagtgcacaggaatcct
acctaccgtccccgctatcgcagagggccccctcgcccacgccctgccccggtgactgga
gaggctgaaaacaaggagaaccatcatgaagccaatgccatgagccagcagccgctgcgc
cgcggctaccggcgcccctacaactaccggcgccggccgcgcccagccagcgctccggca
caggagggcaaagagacaaaggcaactgaaacacctgctgaaaatcctgctccagtgaca
gagcagagtggcgctgagtaa
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