Taeniopygia guttata (zebra finch): 100228172
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Entry
100228172 CDS
T01082
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04142
Lysosome
tgu04144
Endocytosis
tgu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100228172 (CLTC)
04142 Lysosome
100228172 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100228172 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100228172 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgu04147
]
100228172 (CLTC)
Membrane trafficking [BR:
tgu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
100228172 (CLTC)
Exosome [BR:
tgu04147
]
Exosomal proteins
Proteins found in most exosomes
100228172 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
100228172
NCBI-ProteinID:
XP_030144017
Ensembl:
ENSTGUG00000007540
LinkDB
All DBs
Position
19:complement(2447161..2477048)
Genome browser
AA seq
1686 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQSDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKDMYQEAKLTDQLPLII
VCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVV
RGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRE
NPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELW
ASVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNS
VFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFD
VNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSS
YMEVVQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNA
HIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEV
CFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGM
FTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAII
TMMNHPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAV
TFFTKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLA
QRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQW
FLQENKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEK
VDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQP
GFGYSM
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccatccgcttccaggagcatctccagctccaaaatctgggcatc
aacccagcaaacattgggttcagcactctgacaatggagtctgacaaatttatctgcatc
agagagaaagtaggagaacaggctcaagtggtgatcatcgacatgaatgaccccagcaac
ccaatccggagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattgaaagctgggaaaacgctgcaaatctttaacatcgagatgaagagcaagatgaag
gctcacaccatgacagatgatgtcaccttctggaagtggatctctctgaacactgttgcc
ctcgtgacggataatgcagtttaccactggagcatggagggggagtcccagcccgtgaag
atgtttgatcgccactccagccttgccggctgccagatcatcaactacagaactgatgcc
aagcagaaatggctcttgctgactggaatatctgcacagcaaaatcgtgtagtgggagca
atgcagctgtactctgtggacagaaaagtgtcccagcccatcgagggacatgcagccagc
tttgcacagttcaagatggaagggaatgctgaagaatccactcttttctgttttgcagta
agagggcaagctgggggtaagctgcatatcattgaggttggcacaccacccactgggaat
cagccctttccaaagaaagctgtggatgtcttctttcctcctgaagcacaaagtgacttt
cctgttgctatgcagatcagtgacaagcatgatgtggtgttcctcataacaaagtatggc
tacatccacttgtatgatctggaaactggcacctgtatctacatgaacaggatcagtgga
gagaccatttttgttactgcacagcacgaagcaacagctggaattattggagtcaacaga
aagggacaagtgctttcagtgtgcgtggaagaggagaacatcattccctacatcacaaac
gtgctgcagaatcctgacctggctttacggatggctgtccgcaacaacctggcaggggcc
gaggagctctttgccaggaaattcaatgcactctttgcacagggcaactattcagaggca
gcgaaagtggcagctaatgccccaaagggaatcctgcgtactccagacaccatacgccgg
ttccagagtgttccagctcagccagggcagacttcccctctcctgcagtattttggcatt
ctgctggaccaagggcagctgaacaagtatgagtcactggagctctgcagaccagtgctc
cagcagggccgcaagcagctcttggaaaaatggttaaaagaagataagctggagtgctca
gaggagctgggagaccttgtgaaatctgtggatcctacactagcacttagtgtctatctg
agagccaacgttccaaataaggtcatccagtgttttgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggttggatatactccagactggatttttttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgttcaagatgaa
gagcctcttgcagatataacacagattgtggatgtctttatggaatataatttaatccag
caatgtacagccttcctgctggatgcactgaagaataatcgtccctcagaaggtcccctg
caaacacgtttacttgagatgaacctcatgcacgcgccccaggttgcagatgccatcctg
ggaaaccaaatgtttactcactatgacagggctcacatagctcagctgtgtgagaaggct
ggtttgctgcagagagcactggagcacttcacagacctgtacgacatcaagcgtgcggta
gttcacactcacctcctcaaccctgagtggttagtgaattattttgggtccttatcagta
gaagactctctggagtgtctgcgtgcgatgctgtccgcaaacatccgtcagaacctgcag
atctgtgtccaggtagcttccaaataccacgagcagctgtcaacacagtcactcattgag
ctcttcgagtccttcaagagctttgaaggtttgttttatttcctgggttccattgtaaac
ttcagccaggatccagatgtgcacttcaagtacattcaagctgcatgcaagacaggacaa
attaaagaagtggaaagaatctgcagggaaagtaactgctatgatccagaacgtgttaaa
aacttcctcaaggacatgtaccaggaagctaaactcactgaccagctgcctctcatcatt
gtgtgcgaccgctttgactttgtccatgacttggtgctgtatttgtatagaaataatctc
caaaaatatattgagatttatgtacagaaggtgaatccaagccgtctgccagttgttatt
gggggactgcttgatgtggattgctctgaagatgtgatcaagaacctcatccttgtagtg
agaggtcaattttcaactgatgaactcgttgcagaggttgagaaaagaaacaggctgaag
ctgcttctgccctggctggaagcaagaattcacgagggctgtgaggagcctgctactcac
aatgcactggccaagatatacattgacagcaacaacaacccagagagattcctgcgtgag
aatccctactatgacagtcgtgttgttggcaagtactgtgagaagagggaccctcacctg
gcctgcgtggcttacgagcgtggacagtgtgatctggagctgattaatgtgtgcaatgag
aactccctcttcaagagtctctcccgctacttagttcgtcgtaaggaccccgagctctgg
gccagtgtgctgctggaaagcaacccctacagaagacccctgattgaccaggttgtccag
actgcactgtcagagacccaggaccccgaggaagtctctgtcactgtgaaggccttcatg
actgcagatcttcccaatgagctcattgaactgctggagaaaatcgtgctggataattca
gtgttcagtgagcacaggaatctgcagaaccttctcatccttacagctatcaaggctgac
cgcacccgtgtcatggagtacatcaatcgcctggataactatgatgcccctgacatagcc
aatattgctatcagcaatgagctttttgaggaggcatttgctatcttcaggaagtttgat
gtcaatacatcagctgtacaggtgttgatagagcacattgggaacctggaccgtgcgtac
gagttcgccgagcgctgcaatgaacctgcagtgtggagccagctggccaaagcacagctc
cagaaggggatggtaaaggaggcaattgactcctacattaaggcagatgatccttcctca
tacatggaagttgttcaagctgctaatgccagtggaaactgggaagagctggtgaagtat
ctgcagatggcacgcaagaaggcccgggagtcgtatgtggaaacagaattaatctttgct
cttgctaaaacaaaccgcctggcagagctagaggagttcatcaatggccccaacaatgca
catatccagcaggttggtgatcgctgctatgatgagaagatgtatgaagcagccaagctc
ttgtacaacaacgtgtccaacttcggccgtttggcctcaaccttggtgcacctcggcgag
taccaggcagccgtggatggtgctcggaaagccaacagcactcgcacgtggaaagaggtc
tgctttgcttgtgtggatggaaaagaattccgcctggctcagatgtgtgggctccatatt
gtagtgcatgcagatgagctggaagagctaatcaactattaccaggatcgtgggtacttt
gaagagctgatcactatgttggaagcagcgcttgggctggagcgagcacacatggggatg
ttcacagagctggcaattctctactccaagttcaagccacagaagatgagggagcacttg
gagctgttctggtccagagtcaacattcccaaggttttgagagctgcagaacaagcccat
ctctgggctgaactggtgttcctgtatgataagtatgaagaatatgataatgccataatc
acaatgatgaatcacccaacagatgcttggaaagaagggcagttcaaagatatcatcact
aaggtggccaatgtggagctgtactacaaggcagttcaattctatttggaatttaagcct
ctgctgctcaatgatctgctgatggtgttgtcccctcggcttgaccacactcgtgctgtc
accttcttcacaaaggttaaacagctgcccctggttaagccttacctgcgctctgttcaa
aatcacaacaacaaatcagtcaatgagtccctcaacaacctcttcattattgaagaagat
taccaggctcttaggacttctatagatgcttatgacaactttgacaacatttctcttgcc
caacgtttggagaaacacgagctaatagagttccgaaggatcgccgcctatctcttcaaa
ggcaacaaccgctggaaacagagcgtggagctctgtaagaaggacaggctctacaaggat
gccatgcagtacgcttccgaatccaaagatactgagctggcagaagagctgctgcagtgg
ttcttgcaggagaacaagagggaatgctttggtgcttgtctcttcacctgctacgatctc
ctaaggccggatgttgtcttggaaacagcgtggaggcacaacattatggactttgccatg
ccatactttattcaggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaag
gtggataaactggatgcatcagagtctttgagaaaggaagaggagcaagctacagaaaca
caacctattgtttatggccagccccagctgatgctgacagcgggacccagcgtggcagtt
cctccgcaggcacctttcggctacggctacacggcccctccgtacgggcagccgcagccc
ggcttcggctacagcatgtga
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integrated database retrieval system
