Taeniopygia guttata (zebra finch): 100228212
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Entry
100228212 CDS
T01082
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X4
KO
K12842
U2-associated protein SR140
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100228212 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100228212 (U2SURP)
Spliceosome [BR:
tgu03041
]
Complex A
U2 snRNP components
U2 related factors
100228212 (U2SURP)
Complex B
100228212 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
100228212
NCBI-ProteinID:
XP_012430993
Ensembl:
ENSTGUG00000008687
LinkDB
All DBs
Position
9:11260406..11303253
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AA seq
987 aa
AA seq
DB search
MADKAPGGSQKPAGKVRGPDAVHTTGSADSHPLMESKLKAFSIGKMSAAKRTLSKKEQEE
LKKKEDEKAAAEIYEEFLAAFEGGDGNKVKTFVRGGIVNASKEEHETDEKRGKIYKPSSR
FSDQKNQPSQPSNEKPPSLLMIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHK
TKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINP
QMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMI
MSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPK
NKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLF
ENQTPAHVYYRWKLYSILQGDAPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEA
FVEEPNKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSI
LKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQS
ENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIMEDKETEEVPDDLDGAPIEEEL
DGAPLEDVDGIPIDAAPIDDLDGVPIKSLDDDLDGVPLDTTEDSKKNEPIFKVAPSKWEA
VDESELEAQAVTTSKWELFDQHEESEEEEIQNQEEESEDEEDTQSSKSEEQHMYSNPIKE
EMPESKSSVKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKL
LQREKEKEMERERDRDKKDKEKSETRSKDKKEKEECTPTRKERKRRHSASPSPSRSSGSR
RAKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKGKRSPSGSRTPKRSRRSRSRS
PKKSGKKSRSQSRSPHRSHKKSKKSKH
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggcgcccggcggctcgcagaaacccgccgggaaggtcagagggccagat
gcagtacataccactggatctgctgattcacatcctctaatggaaagtaaacttaaagca
ttcagtattggcaaaatgagtgctgccaaacgtactctgagcaagaaagagcaagaagaa
ttaaaaaagaaggaggatgagaaggctgctgcagaaatttatgaagaattcctcgctgcc
tttgaaggaggtgatggtaataaagtgaaaacatttgtaagaggaggaatcgtaaatgca
tctaaagaggagcatgaaacagatgaaaaacggggtaaaatctataaaccttcatcacga
ttttcagatcaaaaaaatcaaccaagtcagccatctaatgagaaacctccgtccctccta
atgatagaaaccaaaaagcctcctttgaagaaaggagagaaggaaaagaaaaagagtaat
ttggaactttttaaagaagaattaaagcaaatccaagaggagcgtgatgaaaggcacaaa
acaaaaggtagattgagtcgttttgaaccaccccagtctgattcagatggtcagcggcgt
tcaatggatgctccttcaagaagaaacagatcatctggtgtactggatgattatgcacca
gggtcacatgatgttggcgatccaagcacaacaaatttgtatctgggaaacatcaatcct
cagatgaatgaagagatgttatgtcaagaatttggacgctttggaccattagcgagtgtt
aaaattatgtggccaagaactgatgaagaaagagcaagagaaagaaattgtggctttgtt
gcctttatgaacagaagagatgctgaaagagcattgaagaatttaaatggcaagatgatt
atgtcttttgaaatgaagctgggctggggcaaagctgtacctataccaccacatccaatc
tacattccgccttccatgatggagcacaccctgccgccgcccccgtcaggactgcctttc
aatgcccagcctagggagaggttgaagaatcctaatgctccaatgttgccaccaccaaaa
aacaaggaagattttgagaagactctgtcgcaagccatagtcaaagtggttatcccaaca
gaaaggaatttgctcgctttgatacatcgaatgatagagtttgtggttcgggaagggccc
atgttcgaagccatgatcatgaaccgagaaatcaacaacccaatgttcaggtttttattt
gaaaaccagactccagcccatgtgtattatagatggaagctttattcaattcttcagggg
gatgctccaaccaagtggaggacagaagatttccgtatgttcaaaaatggatccttctgg
aggccaccaccattgaatccatacctgcacgggatgtcagaagagcaagaaacggaagcg
tttgtggaggaaccgaacaagaagggtgcacttaaggaagaacagagggacaaactagag
gaaattctacgtgggttaacacctcggaagaacgacattggtgacgcaatggttttctgt
ctaaataatgcggaagctgctgaagaaattgtggactgcattacagagtcattgtccatc
ctcaagactcctcttcctaagaagattgcaagattgtatctagtgtcagatgtattatac
aactcttcagctaaagttgccaatgcttcctactatagaaaattttttgaaacaaaatta
tgtcagatattctctgatctcaatgctacttaccgtacaatacaaggccatttacagtct
gaaaatttcaagcaacgggtgatgacatgcttccgagcatgggaagactgggcaatctat
ccagaaccatttctgatcaaactacagaatattttcttgggacttgtaaatatcatggaa
gataaagaaacagaggaagtaccagatgatcttgatggtgctcccattgaggaagagctc
gatggtgctccactagaagatgtggatggaattcctattgatgctgctcctattgatgat
ctggatggagtaccaattaaatcactggatgatgaccttgatggagttcctttggataca
actgaagactcaaaaaagaatgagcctatatttaaagttgccccttcaaagtgggaagca
gtggatgaatcggaactggaagctcaagctgttactacttctaagtgggagctttttgac
caacatgaagaatctgaggaggaggaaattcaaaatcaagaagaagaaagtgaagatgaa
gaagacacacagagttccaagtcagaagaacaacacatgtattccaatcctattaaagag
gaaatgcctgaatccaagtcatcagtcaaatactcagaaatgagtgaagaaaagcgtgcc
aaactcagagagatagagcttaaggtgatgaagtttcaggatgagttagagtctgggaaa
agacccaagaagccaggccagagttttcaggaacaggttgaacactatagagacaagctg
ctccagagggaaaaagaaaaagagatggaaagagaacgggacagagacaaaaaggacaag
gaaaagtctgagaccaggtccaaagataagaaggaaaaagaggaatgtacaccgacacga
aaagagaggaaaaggcggcacagcgcttcccccagcccgtcccgcagcagcggcagccgc
cgggccaagtcgccctcgcccaaatccgagcgctctgagcgctccgagcgctcccacaag
gagagctcccgctcccgctcctcacacaaagattctcccagagatgtcagtaaaaaaggc
aaaaggtcgccatctggctccaggacacccaaaagatcaagaagatcacgatccagatcc
ccaaaaaagtcagggaaaaaatccaggtctcagtcccgttctcctcacagatctcacaag
aagtcaaagaaaagcaaacactga
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