Taeniopygia guttata (zebra finch): 100228257
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Entry
100228257 CDS
T01082
Symbol
DHX32
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100228257 (DHX32)
Enzymes [BR:
tgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100228257 (DHX32)
Spliceosome [BR:
tgu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100228257 (DHX32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
AAA_19
Motif
Other DBs
NCBI-GeneID:
100228257
NCBI-ProteinID:
XP_030132465
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All DBs
Position
6:complement(31928587..31951617)
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AA seq
750 aa
AA seq
DB search
MEFLTFPPENHCFSELLDGSDGDEEEILVCGEDLELNPFDGLPYSSRYYRLMKEREELPI
WKEKCTFMETLLHNQIVIVSGDAKTGKSSQVPQWCAERCAARRPRGAVVCTQVLHRAAVA
LALRAADQLDVTLGHEVGYTVPFESCCTPETILRYCTDEMLQREMMSTPLLNSYSVIILD
DVHQRTVATDALLGLLKEVLAARAELRLVILTAPHMCSTLQRFCGGVPALRVRGKHRATA
VFSCSTHRDPFLPALRLLLEIHHSRESGDIVVFLASEQEIEKAYQMIRQEQPNLNPDLGE
LIPIPLYPTKQDLTPKLIQNRQKCCKKYRRKVLLTTSSGEPLIWTKNVTFVIDVGLETRK
VYNPRIRADSVLTQPISQSQAEVHKQILGMSPSGKIFCLYPEEFTYKEMKPEIPAKVQES
NLTSLVLFLKRMDIAGFAHCDFISSPAPESLMQALEDLDYLAALDNDGNLSEFGIIMSEF
PLDPQLSKSLLASCEFECVDEMLTIAAMVTAPSCFLHVPPGTEEIARSRWRRFSHPAGDH
FTLINVFNAFKAATASPTHPGKYFSSEKWCRDYFLSCSALSMAEMIRAELVEIMKRIELP
ISEPDFASEANLLSIKKALLSGYFMHVARDVDGSGNYLMLTHKQVAQLHPFSSYHSTRRI
PEWVLFHEFSISEGNSIRVVSEISPHLFAELVPQYYFSNLPSSESKDILQEVINHLAPVS
ATKEEEKTVSDSKENEEFPQTPTEQRCVIQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggagtttttaacctttcctccagagaaccactgcttttcagaattactcgacggcagc
gatggggatgaagaggaaatacttgtctgtggagaagatttagagcttaatccttttgat
ggcttgccttactcctcccgttattatagactgatgaaagagagagaagagcttccaata
tggaaagaaaaatgtactttcatggaaactttgctccataatcaaattgtgattgtgtca
ggagatgctaagactggcaagagctcccaggtgccgcagtggtgcgcggagcgctgcgcg
gcgcggcggccgcgcggggccgtggtgtgcacgcaggttctgcaccgcgccgctgtggcg
ctggccctgcgcgccgccgaccagctggatgtcaccctgggccatgaggtgggctacacc
gtccccttcgagagctgctgcacgcccgagaccatcctgaggtactgcacggatgagatg
ctccagagggaaatgatgtccacgcccctcctgaactcctacagcgtcatcatcttggac
gacgtgcaccagaggacagtggccacagatgccctgcttggccttctgaaggaggtcttg
gcagccagagcagagctgaggctggtgatcctgactgccccccacatgtgcagcaccctg
cagcgcttctgcggcggcgtccccgcgttgcgcgtgcggggcaagcaccgcgccacggcc
gtcttctcctgcagcacccacagggaccccttcctgcctgccctcaggctgctcctggag
atccaccactccagggagagcggggacatcgtcgtcttcctggcatctgagcaagaaatt
gaaaaagcttatcagatgatcagacaggaacaacccaatttaaaccctgaccttggagaa
ctcatccccatccctttgtaccccacaaaacaagacctgactcccaaactaattcaaaac
aggcagaaatgctgcaaaaaatacaggaggaaagtgctactcaccaccagctctggagaa
cctttgatctggactaaaaatgtgacttttgtcatcgatgttggtctggagacaagaaag
gtgtacaatcctagaatcagagcagactctgttctaacccagcctatcagccaaagtcaa
gcagaggtgcataaacaaattctgggcatgtctccatcagggaaaatcttctgcttgtat
cctgaagaatttacatacaaggaaatgaagccagaaattccagctaaagttcaggaatcc
aacctcaccagcttggtcctgttcctgaagaggatggacatagcaggctttgcacactgt
gacttcatcagcagcccagctcctgaaagcctgatgcaggctttggaagatctggattat
ctggcagcgctggataacgatgggaacctctctgaatttgggattattatgtcagaattc
cccctggatcctcagctgtccaagtcactgctggcttcctgtgaatttgagtgtgtggat
gagatgctcaccattgcagccatggtcacagctcccagctgcttcctgcacgtccctcct
ggcacagaggagatcgctcggagccgctggcgccgcttctcccaccctgcaggagatcac
ttcaccctcatcaacgtcttcaacgccttcaaggcagccactgccagccccacacaccca
ggcaagtacttcagcagtgagaaatggtgccgtgattatttcctgagctgctcagctctg
agcatggcagagatgatcagagccgagctggtggagattatgaaacgcatcgaacttccc
atctcagaaccagactttgcatcagaagcaaatctactcagcattaagaaagctctttta
tctggttacttcatgcatgttgctcgtgatgtggatggctcagggaactacttaatgctg
acacacaaacaagtggcccagcttcaccccttctcatcctatcacagcaccaggaggatt
ccagagtgggttttattccacgagttcagcatctctgagggcaattccatccgagttgtc
tccgagatctccccccatctatttgcagagctggtacctcagtattatttcagtaatctt
ccttcaagtgaaagcaaggatattctgcaggaagtgatcaatcacttggcacctgtttca
gccacaaaggaggaagagaaaactgtcagtgacagcaaagaaaatgaggaatttccccaa
actcccaccgagcagagatgtgttattcagtga
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