Taeniopygia guttata (zebra finch): 100228371
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Entry
100228371 CDS
T01082
Symbol
UNC5C
Name
(RefSeq) netrin receptor UNC5C isoform X1
KO
K07521
netrin receptor unc-5
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100228371 (UNC5C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgu04515
]
100228371 (UNC5C)
Cell adhesion molecules [BR:
tgu04515
]
Immunoglobulin superfamily
DCC/UNC5 family
100228371 (UNC5C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPA
Unc5_NetrinR_N
ZU5
Death
Ig_3
TSP_1
I-set
TSP1_spondin
Ig_2
ig
VEGFR1-3_N_Ig-like
TSP1_ADAMTS
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
100228371
NCBI-ProteinID:
XP_030127560
Ensembl:
ENSTGUG00000003206
LinkDB
All DBs
Position
4:50650648..50901540
Genome browser
AA seq
950 aa
AA seq
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MGKGLEGTAARCGLGLGYLLQTVVLPALAVLGASRPGSAAQDDDFFHELPETFPSDPPEP
LPHFLIEPEEAYIVKNKPVNLYCKASPATQIYFKCNSEWVHQKDHVVDERVDETSGLIVR
EVSIEISRQQVEELFGPEDYWCQCVAWSSAGTTKSRKAYVRIAYLRKTFEQEPLGKEVSL
EQEVLLQCRPPEGIPAAEVEWLKNEEVIDPVEDRNFYITIDHNLIIKQARLSDTANYTCV
AKNIVAKRKSTTATVIVYVNGGWSTWTEWSVCNSRCGRGFQKRTRTCTNPAPLNGGAFCE
GQSVQKIACTTLCPVDGKWTPWSKWSTCGTECTHWRRRECTAPAPKNGGKDCEGLVLQSK
NCTDGLCMQGFIYPISTEQRTQNEYGFSSAPDSDDVALYVGIVIAVIVCLAISVVVALFV
YRKNHRDFESDIIDSSALNGGFQPVNIKAARQDLLAVPPDLTSAAAMYRGPVYALHDVSD
KIPMTNSPILDPLPNLKIKVYNTPGAVTPQDDLSDFSSKLSPQMTQSLLENETLNMKNQS
LARQTDPSCTAFGTFNSLGGHLVIPNSGVSLLIPAGAVPQGRVYEMYLTVHRKENMRPPV
EDSQTLLTPVVSCGPPGALLTRPVILTMHHCAEPNTEDWQIQLKHQAAQGPWEDVVVVGE
ENFTTPCYIQLDPEACHILTETLSTYALVGQSITKAAAKRLKLAIFGPLSCSSLEYSIRV
YCLDDTQDALKEVLQLEQQMGGQLLEEPKTLHFKGSTHNLRLSIHDLAHSLWKSKLLAKY
QEIPFYHIWSGCQRNLHCTFTLERFSLNTQELVCKLCVRQVEGEGQIFQLNCSVSEEPTG
IDYPPMDSAGTITTIVGPSAFSIPHPIRQKLCSSLDAPQTRGHDWRMLAHKLKLDRYLNY
FATKSSPTGVILDLWEAQNFPDGNLSMLAAVLEEMGRHETVVSLAAEGNY
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggggctggaggggacagcagcccgctgcgggctgggactgggatacctgctg
cagaccgtggtgctccccgccctcgccgtcctgggggccagccgccccggctccgcggcg
caagatgatgacttttttcatgagcttccagaaacttttccatctgatcctccagagcca
ttaccccacttcctcattgaacctgaagaggcttacattgtgaagaacaagcctgtgaat
ctttactgcaaagcaagcccagcaacacaaatctattttaagtgcaacagcgagtgggtt
catcagaaggaccacgtggtggatgagagagtagatgaaacttctggtctgattgtccgg
gaggtcagcatcgagatttcccggcagcaagtggaggagctctttgggccggaggattac
tggtgccagtgtgttgcctggagctccgcaggcaccaccaagagccgcaaagcctatgtc
cgcattgcatatctccggaaaacttttgagcaggagcccttagggaaagaagtgtccctg
gagcaagaggtcctgctccagtgccgtccccctgaaggcatcccagcagctgaggtggag
tggctgaagaatgaagaggtgattgaccccgtggaagaccgaaacttttacatcaccatt
gatcacaacctgatcatcaagcaagcccggctttctgacaccgccaattacacctgtgtt
gcaaaaaacattgtggccaaaaggaaaagcactacagcgactgtcatagtctatgtgaac
ggaggctggtccacctggacagagtggtcggtgtgtaacagccgctgcgggagaggcttc
cagaagcgcaccaggacctgcaccaaccctgccccgctcaacggcggcgccttctgcgag
ggccagagcgtccagaaaatagcttgcaccactctgtgcccagtggatggcaagtggaca
ccctggagcaagtggtccacctgtggcacggagtgcacccactggcgccgcagagagtgc
acggccccagctcccaagaacggggggaaggactgtgaggggctggtgctgcagtccaag
aactgcacggatgggctctgcatgcagggtttcatttatcctatttcaactgaacagaga
acccagaatgaatatggattttcctctgctcctgactcagatgacgttgcgctctacgtg
gggatcgtcatcgctgtgattgtgtgcctggccatttctgtggtcgtggccctgtttgtg
taccgcaagaaccaccgggactttgagtcggatattattgactcctcggcactgaacggg
ggatttcagcctgtcaacatcaaggctgcaaggcaagacctcctggcagtgccaccagac
ctcacttctgctgcagccatgtacaggggtcctgtgtacgccttgcatgatgtctctgat
aaaatcccaatgaccaactctccaattctggaccccctccccaacttgaagatcaaggtt
tataacacccctggtgcagtcactccccaggatgacctctctgacttctcctccaagctg
tccccacagatgacgcagtctctgctggaaaatgagaccctgaacatgaagaaccagagc
cttgcccggcaaactgacccatcatgcaccgcctttgggaccttcaattccttaggaggc
cacctagtaattcccaattcaggagtaagtttgctgatcccagcgggagccgttccacaa
gggagagtctatgaaatgtatctgacagttcacaggaaggagaacatgaggccacctgta
gaagacagccaaaccctgctgacacccgtggtgagctgtggcccaccaggagccctgcta
acccggcccgtcattttaaccatgcaccactgcgcagagccaaacacagaggactggcag
atccagctgaagcaccaggctgcccagggaccatgggaggatgtggtggtggtcggagag
gaaaacttcaccaccccgtgctatatccagctggacccagaggcctgccatatcctgaca
gaaaccctcagcacctatgccttggtgggacagtcaatcaccaaggcagcagccaaacgt
ctcaaactggccatctttggacctctgtcctgctcttccttggagtacagcatccgggtc
tactgcctcgatgacacgcaggatgctcttaaggaggtcctccagcttgagcagcagatg
ggtgggcagcttttggaagagcctaaaactttgcatttcaagggaagcacccacaacctt
cgtctgtccattcatgacctcgcccattctctctggaagagcaagctgctggctaaatac
caggagattcccttttaccacatctggagtggctgtcagaggaacctgcactgcaccttc
acactggaaaggttcagtctgaatacccaggagctggtgtgcaaactgtgtgtgcggcag
gtcgaaggagaaggacagatcttccagcttaactgctctgtctcagaggaacctactggc
attgattaccctcccatggactcagcaggcaccatcaccaccatcgtggggcccagcgct
ttcagcatcccccacccgataaggcagaagctgtgcagcagcctggatgctccccagacc
agaggccacgactggcgcatgctggcccacaagctgaaactggacaggtacttaaattat
tttgctacgaaatcaagtcctactggggtgatcctggatctctgggaagcccagaatttc
cctgatggcaacctgagcatgctggcagcagttcttgaagaaatgggaagacacgaaaca
gttgtttctttggcagcagaaggaaattactaa
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