Taeniopygia guttata (zebra finch): 100228497
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Entry
100228497 CDS
T01082
Symbol
STAG2
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100228497 (STAG2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100228497 (STAG2)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100228497 (STAG2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
AdoHcyase_NAD
Motif
Other DBs
NCBI-GeneID:
100228497
NCBI-ProteinID:
XP_012428570
UniProt:
H0Z009
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Position
4A:9570187..9642772
Genome browser
AA seq
1262 aa
AA seq
DB search
MIAAPEIPTDFTLLQESETHFSSDTDFEDIEGKSQKQGKGKTCKKGKKGPAEKGKSGNGG
GKPSGPNRMNGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFF
IQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGV
LVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINM
DNTQRQYEAERNKIIGKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAI
AEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNKELN
SKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAH
RPVAVAAGEFLYKKLFSRRDAEDDGILKRRGRQSPNANLVKTLVFFFLESELHEHAAYLV
DSMWDCATDLLKDWECMNSLLLEEPLNGEEPLTDRQESALIEIMLCTIRQAAECHPPVGR
GTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYT
TGRLEKHLDALLRQIRDIVEKHTDIDVLEACSKTYHALCNEEFTIFNRVDIARSQLIDEL
ADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSRWDLFGCNYKLLKTGIE
NGDMPEQIVIHALQCTHYVILWQLAKVTESSSTKEDLLRLKKQMRVFCQICQHYLTNVNT
AVKEQAFTILCDVLMIFSHQIMTGGRDILEPLVYTPDSSLQSELLSFILDHVFIDQDDDN
NSADGQQDDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIK
ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSPTFSGIKELARRFALTFGL
DQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVY
LEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVISGISSRGSTVRNKKTKPATGK
RKVPEAEESSSSDSMWLNREQSMHTPVMMQTPQLTSTIMREPKRLRPDENYMGVYPMQPE
HHQPPLDYNTQVTWMLAQRQQEEAARQQQERAAMNYVKLRSNLQHAIRRGTSLMEDDEEP
IVEDVMMSSEGRIEDLNEGMDFDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVS
MF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagctccagaaataccaactgattttactctccttcaggagtctgaaacacac
ttctcttctgatacagactttgaggatattgaaggaaaaagccaaaaacaaggcaaaggc
aaaacttgtaaaaaaggaaaaaaaggaccagcagagaagggaaaaagtggaaacggagga
gggaaacccagtggtccgaatcggatgaatggacatcaccaacagaatggtgtggaaaac
atgatgctctttgaagtagtgaaaatgggcaagagtgctatgcagtcagtagtggatgac
tggatagagtcatacaaacatgaccgagatatagcacttcttgatctcattaacttcttt
attcagtgttcaggctgcaaaggagttgttacagcagagatgttccgacatatgcagaat
tctgaaataatccgaaaaatgactgaagaatttgatgaggatagtggagattatccacta
actatggctggcccccaatggaaaaagttcaaatccagtttttgtgagttcattggagta
ctcgtccgacaatgtcaatatagcatcatatatgatgaatatatgatggatactgtcatt
tccctgcttacggggctgtcagactcacaagtcagagcctttcggcacactagcacactg
gcagccatgaaactgatgactgctttagtgaatgtggcattaaatctaagtattaacatg
gacaacacacagcggcagtatgaagcagaacgaaataaaataattgggaaaagagctaat
gataggctggaactcttactacagaagaggaaggagcttcaagaaaatcaggatgaaata
gaaaacatgatgaatgcaatatttaaaggtgtttttgtgcatagataccgagatgcaatt
gctgaaataagagccatctgcattgaggagattggaatatggatgaaaatgtacagtgac
gccttcctcaatgacagctacttaaaatatgtggggtggactatgcatgacaagcaagga
gaagtaagactcaaatgcctaactgctttgcaagggctttactataataaggagcttaat
tccaaattggaactcttcaccagtcggttcaaggatagaattgtgtctatgactcttgac
aaagaatatgatgttgcagtccaagcaataaaattactcactcttgttttacagagtagt
gaagaagttctgacagcagaagactgtgaaaatgtctaccacctggtttattcagctcat
cggccagtagcagttgccgcaggggaatttctttataaaaagcttttcagccgcagagat
gctgaagatgatggaatactgaaaaggaggggaagacaaagtccaaatgctaatcttgtg
aagacattagtgtttttcttcttggaaagtgaattgcatgaacatgctgcttatcttgtg
gacagcatgtgggactgtgcaacagacctcttgaaggactgggaatgtatgaacagtctt
ctgctggaggagcctctcaatggagaagaacctttaacagacagacaggaaagcgcactg
attgaaatcatgctttgtacaattcggcaggcggctgaatgtcatcctcctgtgggaaga
ggaacggggaaaagggtgctgacagcaaaggaaaagaagacccaattggatgacaggaca
aaaattactgagctttttgcagtggcacttcctcagttgctagcaaagtattctgtagat
gcagaaaaagtcaccaacttactgcagttgccacagtactttgatttggaaatttataca
acagggcgattagaaaagcatttggatgccttactgcgacaaattcgggatattgtggag
aagcacacagatatagatgttttggaagcctgttcaaaaacctaccatgctctctgtaat
gaagaattcacaatctttaacagggttgacattgcaagaagtcagttaatagatgaattg
gcagacaagtttaatcgacttcttgaggatttcctgcaagagggggaggaacctgatgaa
gatgatgcatatcaagtcttgtcaacactgaagagaatcactgcttttcacaatgctcat
gacctatcaagatgggacttgtttggctgcaactacaagctattgaaaactggcattgaa
aatggagacatgccagaacagattgttattcatgcactgcagtgtactcattatgtaatc
ctttggcagctagcaaaagttactgaaagcagttccacaaaggaggatcttctacgtctg
aagaagcagatgagagtgttctgtcaaatctgtcaacactacctgaccaatgtaaatact
gctgttaaggaacaggctttcacaattctgtgtgatgtgttgatgatcttcagccatcag
attatgacaggaggacgtgacatcttggagccacttgtttacactcctgattcttccttg
caatctgaactactcagttttattttagatcatgtcttcattgatcaggatgatgataat
aatagtgcggatggacagcaggatgatgaagccagcaaaattgaagcattacacaaaaga
agaaacctccttgcagctttctgtaagctcattgtatatactgtggtggaaatgaacaca
gccgccgacattttcaagcaatatatgaagtattacaatgactatggtgatattattaaa
gaaacgatgagtaaaacaaggcagatagataaaatccagtgtgctaaaacacttattctt
agtttgcagcagctcttcaacgaaatgattcaagaaaatggttataattttgacagatca
tcaccaacattcagtggtataaaggagcttgctcgacgttttgctttaacatttggattg
gatcagttgaaaacaagagaagctattgctatgttacacaaggatggcatagaatttgct
tttaaggagcctaatccacaaggtgagagccacccaccattaaatttggcatttctcgat
attctcagtgagttctcctcgaaacttctcagacaagacaaaagaacagtgtatgtttac
ttggagaagttcatgacctttcagatgtctctacgaagagaagatgtgtggcttcctctc
atgtcctaccgaaactctttattagccggtggggatgacgataccatgtcagtgattagt
ggaatcagtagtcgaggatctacagtaagaaataagaagacaaagccagcaacaggcaag
cggaaagtacctgaagctgaagaaagcagcagtagtgacagtatgtggctgaacagggag
cagtcaatgcacacaccagtcatgatgcagacacctcagctcacttccacgataatgagg
gagcccaagagattgcgacccgacgagaactacatgggtgtctatcctatgcagcccgag
caccaccaaccgccgctcgactacaacacgcaagtaacgtggatgttggctcaaaggcaa
caggaagaagccgcgcgacaacaacaggagagggcagcgatgaactacgtcaagctgaga
agcaacttgcaacacgccattcgacgtggcacaagtctaatggaagatgatgaagagcca
attgttgaagatgtgatgatgtcatcagaagggcggattgaagatcttaatgaaggcatg
gattttgacaccatggacatagacctaccaccatcaaagaacaggagggaacgaacggaa
ctaaaaccagatttctttgaccccgcttcaatcatggatgaatcggttcttggggtgtca
atgttttaa
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