Taeniopygia guttata (zebra finch): 100228506
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Entry
100228506 CDS
T01082
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
100228506 (AFF3)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100228506 (AFF3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
100228506
NCBI-ProteinID:
XP_030134346
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All DBs
Position
1:complement(83845848..84172251)
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AA seq
1254 aa
AA seq
DB search
MDSFDLALLQEWDLDSLCVYEPDRNVLRRKEWERRNQEAQQDNGAFNMSYSLFSEPYKTN
KGDELSNRIQNTLGNYDEMKDLLTDRSNQSHLVGVPKPGVPQTPLPKTDEHHIADSRPPP
PPPISSTTSSTPASLAAQQSKSTTMGWQKSGHNASSDGQQRASKHGHRSLESHKGDFKLA
SQKSNLEKLKHYALSPTSSSSSSSTSSSSSTTSSSSSSSSSNTAQQSSLRATLGDNTNRV
QQPAKLSCSSEGGTKVQERPAKHGGGHCVQNFPPSLASKPSLGQQKPTAYVRPMDGQDQA
PDESPKLKLPAETTKSYRGVPSSKPDSARTKSKITKFSIPKQEEDSGTGDNSCIEEILRE
MTHSWPPPLSAIHTPGKAEQSKFPFPNKESQQGSTGHSNTRKSDVEPKTPEKSATHTSML
EDDLKLSSDEEENDQQAAQRSALRVLSDSLVVPQSNARAPGLSSKGSSSSSSSESETSSE
SDSESESSSSESDGSKPSHYSSPEPEPPSSNKWQLDKWLNKVTPHKAPILAHHDGPALEA
HPYYGRVKAERQEGQKTPAEGPAEHRSEESRTAANAAAAAAGDGPRPRTASKAPGSKGSR
QKSPLAADGGPPRRAAGKKAPRRAERNSGGDGPPCPSAEELPRSHGFPDSAAGEAPRARP
AGGGCRAGHRREPRSAAAGEKRRARGPSKTAPKSKEFIETESSSSSSSSDSGSESEREEC
PLPKAPAAAGPEPRGAKDAGTGTASKPHGGCSAFGSINARTSSEIAKELEEQFYTLVPFG
RNELLSPLKDSDEVKSLWVNIDLALLSRIPERLPEEPLAMSAGANQAASSPQGSSAEPPA
EKGLPKSRRKRKCENEEECRDNKKTHLERESSSRLAASAQSVTTANHCNINENSLAIPIN
KNEKMLRSPVSPLSDASKHKYSNDDLTSSSRPNGSSLLPSISSSKKHKGEIQSQPHPGDL
NKAIHINSENILLCNKPQFQTEPWPPLSTTPRDCRRTKLIFDDIPRNADYFMQEAKRKKH
KADAMVEKFGKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAVRLKTHS
GPNATPEDKQLAALCYRCLALLYWRMFRLKRDHAVKYSKALIEYFKNSSKAHQNPSPWGA
SGKSTGTPSPMSPSPSPVSSVGSQGSTGAPSPSPIITIPQRIHQMAANHVSITNSILHSY
DYWEMAENLAKENRDFFNDLDALMGPITLHSSMEHLVQYTQQGLHWVRNSAHLS
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagctctccttcaggagtgggacctggactctctatgtgtctat
gagccagatagaaacgtgctgcgaaggaaggaatgggaaaggagaaatcaggaggcccag
caggacaatggcgcatttaacatgagctattccctcttcagtgaaccgtacaagactaac
aagggggatgagctttccaatcgcatccagaatactttgggcaactatgatgaaatgaaa
gacttgttaactgaccggtcaaaccagagccatctcgttggggttccgaaaccgggggtt
cctcagacacctctccccaagactgatgagcatcatatcgcagactcgagaccaccacct
cctcctcctatttccagcactacttcttcaacaccagcatccctagctgcccagcagagc
aaaagtaccacaatgggctggcagaagtctgggcataatgccagttcagatggccagcag
agagcaagcaaacacggacaccggtcgctggagtcacacaagggtgacttcaaactggcg
agccaaaaatccaatttggagaaactaaaacactatgcattgagtcccacctcctcctct
tcctcctcctccacctcctcttcctcctccaccacttcctcctcctcctcctcctcctcc
tccaatactgcccagcaaagttcactgagggccacattaggagacaacaccaatagagtc
cagcagccagcaaagctcagctgtagctcagaaggaggaaccaaagtccaagagaggcca
gcaaagcatggtggggggcactgcgtccaaaacttcccaccttctcttgcttcaaagccc
agtctgggtcagcagaagccaacagcttatgtaaggccaatggatggtcaagaccaggct
cctgatgagtctccaaagctgaagttaccggcagagacgaccaagtcatatcggggagtg
ccttccagcaagcctgattcggctaggaccaagtcaaagatcaccaagttcagcattcct
aagcaagaagaagacagtggaacaggagataacagctgcattgaagaaatattgcgggag
atgacgcattcatggcctccgccactgtcagctattcacacaccaggaaaggcagaacaa
agcaagtttcccttcccaaacaaggagtcacaacagggatctacaggacacagcaataca
aggaaaagtgatgtagagccaaagaccccagagaaaagcgcaacccatacatcaatgcta
gaagatgacctcaagttaagcagtgatgaagaggagaatgaccagcaggcagcacagaga
tctgctctccgcgttctatctgacagcctggtggtgccgcagtccaatgcccgagccccg
ggactctccagcaaggggtcgagcagcagcagctccagtgaatccgagaccagctcagag
tctgactcagagagcgaaagcagctctagcgagagtgacggcagcaagccctcgcattac
tccagcccagagcctgagccgccctcgtccaacaagtggcagctggacaagtggctgaac
aaagttacccctcacaaagcacccatcctagcccaccacgatggcccggcgctggaagcc
catccctactacggccgggtgaaggcagagcggcaggaaggacagaagaccccggctgag
ggcccggccgagcaccgcagtgaggagagccgcaccgccgccaacgccgccgccgctgcc
gccggggacgggccgcggcccaggaccgccagcaaagcgccgggcagcaagggcagccgg
cagaagtcacccctcgctgccgacggcgggccgccgaggcgggcagcagggaagaaggca
ccgcggcgcgccgagaggaactcgggcggagacgggccgccctgccccagcgcagaggag
ctgccccggagccacggcttccctgacagcgctgccggcgaggcgcccagggcccggccc
gccggcggcggctgcagagcggggcaccgccgggagccccgctcagccgcagctggtgag
aagcgtcgggcccgagggccgagcaaaacggcgcccaaatccaaggagttcatcgagacc
gagtcttcgtcctcatcatcctcctccgactcaggctctgagtcggagcgggaggagtgc
ccgctgcccaaggcgccagcggcagccgggcctgagccgcggggtgccaaggacgcgggg
accggcaccgccagcaaaccccacggcggctgcagtgcctttggctctattaatgccagg
actagtagtgaaatagcaaaggagctggaggaacagttttacaccctggttcctttcggt
aggaatgagctcctgtctcctctgaaagacagtgatgaggtaaagtcgctgtgggtcaac
attgacttggctcttttgtccaggattccagagcgtttgcccgaagaaccgctggccatg
agcgccggagcaaaccaggcggccagctccccgcagggtagtagtgctgaaccccccgca
gagaagggtttaccgaaatctagaaggaaacgcaagtgtgagaatgaggaagagtgcaga
gacaacaagaagactcacttagagcgggagagttcttcacgtttagctgcctctgcccaa
agcgtcacaacagcaaatcactgcaatataaatgaaaatagcttggcaataccaataaat
aaaaatgagaaaatgcttcggtcacccgtctctcccctctctgatgcatcaaaacacaaa
tattccaacgatgatttaacttcctccagcagacctaatggcagcagtctattaccttca
atctcctccagcaaaaaacataagggtgaaatccagtcacagccacatcctggggacctc
aataaagcaattcacatcaattcagaaaatattcttctctgcaataagccacagttccaa
acagagccttggccacctctatccaccacacccagggactgcagaagaacaaagcttatc
tttgatgatataccacgcaatgcagattactttatgcaggaagctaaacggaagaagcat
aaagcagatgcaatggtggagaagtttggaaaggcactgaattatgcagaagcagcacta
tcatttattgagtgtggaaatgcaatggaacaaggcccaatggaatctaaatccccttat
accatgtattcagaaacagttgaactcatcaggtatgcagtgagactaaaaacccactca
ggccccaacgccacgccagaagacaaacagctggcagcattatgttaccgctgcctggcc
cttctgtactggaggatgttccgactcaagagagaccacgcggtcaagtattcaaaagcg
cttattgagtatttcaagaattcatcaaaagctcaccagaatccgtctccttggggtgcc
agtggaaagagcacaggaactccatcaccaatgtcccctagcccttctccagtcagttct
gtaggatcccaggggagcacgggggccccttccccatctcctatcatcaccatcccacag
cgcattcatcagatggccgccaaccacgtcagcatcaccaacagcatcctgcacagctat
gactactgggagatggctgaaaacctggccaaggaaaacagagatttttttaacgacttg
gatgcattgatgggacctattaccttgcacagcagtatggagcatttagttcagtacact
caacaaggacttcactgggtgcggaatagtgctcacttgtcataa
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