Taeniopygia guttata (zebra finch): 100228572
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Entry
100228572 CDS
T01082
Symbol
UBB
Name
(RefSeq) polyubiquitin-B isoform X2
KO
K04551
ubiquitin B
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04120
Ubiquitin mediated proteolysis
tgu04137
Mitophagy - animal
tgu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100228572 (UBB)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100228572 (UBB)
04137 Mitophagy - animal
100228572 (UBB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100228572 (UBB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgu04147
]
100228572 (UBB)
Ubiquitin system [BR:
tgu04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
100228572 (UBB)
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of breast milk
100228572 (UBB)
Exosomal proteins of other body fluids (saliva and urine)
100228572 (UBB)
Exosomal proteins of colorectal cancer cells
100228572 (UBB)
Exosomal proteins of bladder cancer cells
100228572 (UBB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
100228572
NCBI-ProteinID:
XP_012433432
UniProt:
B5G2P5
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All DBs
Position
15:complement(12115879..12117299)
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AA seq
229 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtcaagaccctgactggcaagaccatcacccttgaggttgagcccagt
gacaccatcgaaaatgtcaaggccaagatccaggacaaggaaggcatccctcctgaccag
cagaggttgatctttgctggcaagcagctggaagacggccgcaccctgtctgactacaac
atccagaaagaatctactctgcatctcgtgctgcgcctcagaggtgggatgcagatcttt
gtcaagaccctgactggcaagaccatcactctggaagtcgagcccagtgacaccattgag
aacgtgaaggccaagatccaggacaaggaaggcatccctccagaccagcagaggctgatt
ttcgctggcaagcagctggaagacggccgcaccctgtctgactacaacatccagaaagaa
tctactctgcatctcgtgctgcgcctgcggggtgggatgcagatctttgtcaagaccctg
acaggcaagaccatcacccttgaggttgagcccagtgacaccattgagaatgtcaaggcc
aagatccaggacaaggaaggcatccctcctgaccagcagaggttgatctttgctggcaag
cagctggaagatgggcgcaccctctctgactacaacatccagaaggaatctactctgcac
cttgtcctgcgcctccggggtggtaactaa
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