Taeniopygia guttata (zebra finch): 100228689
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Entry
100228689 CDS
T01082
Symbol
RIN2
Name
(RefSeq) LOW QUALITY PROTEIN: ras and Rab interactor 2
KO
K23687
Ras and Rab interactor 2/3
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100228689 (RIN2)
Membrane trafficking [BR:
tgu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100228689 (RIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
RIN1
VPS9
RA
Lpg0393_VPS9
SH2
RNA_pol_3_Rpc31
BUD22
FERM_f0
SH2_1
PPP4R2
RA_2
VRP3
RelB
PBP1_TM
NOA36
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
100228689
NCBI-ProteinID:
XP_030124491
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All DBs
Position
3:complement(82723236..82911571)
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AA seq
1480 aa
AA seq
DB search
MGAPGTAAERRRPRRRQGQLLRGQRCALCALCSLALLLASCAAGRGGYDALSYSVGNGDN
WSGRQLLQAREKNVTDFPEDGGQLYIRNCTEPALHEFPNDIFTNEDRRHGAVVLHILCAV
YMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTSVIGVFITKGDV
GVGTIVGSAVFNILCIIGMCGLFAGQVVALSSWSLLRDSIYYTLSVVALIVFIYDERVSW
WESLVLVLMYVIYIFIMKYNSTIHHFFERKTKSPANMVNGLASNTEMDDNSNCDATVVLL
KKGNFHRKASVIMVDELLSAYPHQLSFSEAGLRIMITSHFPPKTRLSMASRMLINERQRL
INSRTYTNGESEVAIKIPIKHVVENGTGPSNSAERGVSSTQRDEDVAEARNENENEDNKN
NENDEEEEDDDDDDDDDHEGPYTPFDLPTGKIEMLKWVFTWPLNFVLYFTVPNCNKPHLE
KWFMVTFASSTLWIAAFSYMMVWMVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVA
RQGMGDMAVSNSIGSNVFDILIGLGLPWALQTLAVNYGSYEIKAYSGVFXGKMSSLTMRT
CCVDKRGSFFKLIDTIASEIGELKQEMVQTDLTVEDECADWRSLIVDMDNVSPEKNDVKC
CPRDSGYDSLSNKLSILDKLLHTHPVWLQLGLNDAEAMEILQTQPPGIFLVRKSATLQKK
VISLRLSSDSGSCLKEFAIKESTYTFSLEGSGISFADLFRLIAFYCISRDVLPFTLKLPH
AIAAAKTEGELEEVAQLGLNFWSSLASSKPPDPSLPCRPVPLDSAHKDSRQLCLINGVHS
IQTRTPSELECSQTNGALCFINPLFLKVHSQDVSGSLKRQTLRTPDVNGRARPCSPPPRP
PPPAINSTLMSPQISRTIKQTSMPETVSHKKERGLDLLQNKPTPIPPPRLKKQAVCPEAD
SASRSVATVRPDSACVPEAAAVPHETLPEPAPAAPKKTPAAISESHIPWNRGQQRLSDMS
ISTSSSDSLDFDRSMPLFGYEGDTNSSLEDFEGESDQESMAPPLKPKKKRSSSFVLPKIV
KSQLRKVSGVFSSFMTPEKRMIKKIAEMSRDKRTYFGCLVQDYVSFLQENKECHVSSTDM
LQTIRQFMTQVKNYLSQSSELDPPIESLIPEDQIDVVLEKAMHKCILKPLKGHIEAMLKE
FHTTDGSWKQLKENLQLVRQRNPQELGVFVPTPDFVDLEKIKVKFMTMRKMYSPEKKVML
LLRVCKLIYTVMENNSGRLYGADDFLPVLTYVLAQCDMLELDTEIEYMMELLDPSLLHGE
GGYYLTSAYGALSLIKNFQEEQAAQLLSSEARDTLRQWHKRRTTNRTIPSVDDFQNYLRV
AFQEVTSGCTGKTLLVRPYITTEDVCQLCAEKFKVANPEEYRLFLFVDDTWQQLTEDTYP
QKIKAELHSRPQPQVFHFVYKRVNSDPYGAILQNSNNSAA
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccccaggcacggcggcggagcggcggcggccgcggcggcggcaggggcagctg
ctgcgagggcagcgctgcgcgctgtgcgcgctgtgctcgctggccctgctgctggccagc
tgcgcggccggccgcggcggttacgatgccctgagctactctgtgggaaatggtgacaat
tggagtgggcgacaactcctgcaagcacgtgagaagaacgtgactgactttccagaggat
ggagggcagctctacatcagaaactgcactgaaccagctctccatgaattccccaatgac
atcttcacgaatgaggacaggagacatggagctgttgtcctgcacatcctctgtgctgtg
tacatgttctacgcattggcaattgtctgcgatgacttcttcgtcccttcactggaaaag
atctgtgaacgcttgcatctcagcgaagatgtggctggggcaactttcatggcagcagga
agctctgctcccgagctgttcacatctgtcataggtgtttttatcacaaaaggagacgta
ggcgttggaaccattgtgggctcggctgtattcaacatcctctgtattattgggatgtgt
gggctttttgcaggacaggtggttgcactgtcgtcatggagtctcttgagagattcaatc
tactacaccctctctgttgttgcactcattgtgtttatttatgatgaaagagtttcctgg
tgggagtccttagtcttagtgctgatgtatgtcatctacatctttataatgaagtacaac
tcgactatacatcacttctttgagaggaagacaaaaagccctgcaaatatggttaatggt
ttagcaagtaacacagaaatggatgacaacagcaactgtgatgccacagtggtgttacta
aagaaaggaaatttccaccgtaaagcctctgtgatcatggttgatgagctgctctctgcc
tacccacaccagctttcattttccgaggctgggctccggatcatgataaccagccatttc
cctcccaaaacacgtctctccatggccagccgcatgttaatcaatgagagacagaggctg
atcaacagcaggacttacaccaacggtgagtcagaagtagcaatcaaaatacccatcaag
catgtggtggagaatggaacaggccccagcaattctgctgagcgtggtgtgagcagcaca
cagcgggatgaggacgtggctgaggctaggaatgagaatgagaatgaggataacaagaac
aatgaaaacgatgaggaagaagaagatgatgatgatgatgatgacgatgaccatgaaggg
ccatacacaccttttgacctacctactggcaagatagaaatgttgaagtgggtcttcaca
tggcccttgaattttgtcctgtacttcacagtgcccaattgtaacaaaccccacttggaa
aaatggttcatggtcacctttgcttcttctaccctgtggattgcagctttttcttacatg
atggtgtggatggtgacaatcattgggtacactctgggaattccagacgtaatcatgggc
atcactttcttggcagcaggaaccagcgtgccagactgcatggccagccttattgtggcc
aggcaaggtatgggggatatggccgtgtccaactccatcggaagcaatgtttttgatatt
ttaatcggcctaggccttccatgggctttgcagaccctagcagtgaattatggatcatac
gagatcaaggcatacagtggagtcttctaagggaagatgtcatctttgacaatgagaacc
tgttgtgtggataaaagaggaagtttctttaagctcattgacacaattgcctcagaaatc
ggagaactgaaacaggagatggtacagacagatctcacagtggaagatgaatgtgctgat
tggcgaagtctaatagtggatatggataatgtctctcctgagaaaaatgacgtaaaatgc
tgcccccgggactctggatatgacagcctatccaacaagctaagcatactggacaaactc
ctccatactcaccctgtgtggctgcagcttggtctgaatgatgctgaagccatggaaatt
ttgcagacacagcctcctgggatatttctggttaggaaatctgcaacactgcagaagaaa
gttatctctctgcgtctgtccagtgattctgggtcctgcctgaaagaatttgccataaaa
gaaagtacatacacattttccttggaggggtctggaataagttttgctgatttgttcaga
ctcattgctttctactgtataagcagagatgtccttccattcacactgaagttgcctcat
gcaattgctgcagcaaagacagaaggtgaacttgaagaggttgctcagcttggactgaac
ttttggagctccctggctagcagcaaacccccagatccttcacttccctgtaggcctgtg
cctttggacagtgctcacaaagactcacgccagctctgccttataaatggagtgcattct
atacaaaccagaacgccttcagagttggagtgcagccagaccaacggagcgctgtgtttc
attaatcctctcttcttaaaagtgcacagccaggatgtcagtggaagtctgaaaaggcag
accctgagaactccagacgtgaatggcagagcgaggccttgctcccctccgccccggcca
ccacctcctgctattaatagcaccctcatgagcccacagatttccaggactataaagcag
acgagcatgccagaaacagtcagccataagaaggagaggggcttggatttgctgcagaac
aagcccaccccgattccgcctcctcggctgaagaagcaggctgtgtgccccgaggcagac
agtgcctccaggagtgtggcaacagttcggcctgactctgcgtgtgtgccggaggcagct
gcggttccacatgaaaccctgcccgagccggctccagcagctcccaaaaagacgccggct
gccatctctgagtcacacatcccgtggaatagaggccagcagagactgagcgacatgagc
atttccacctcctcatctgactctctggacttcgatcggagcatgccgctctttggctat
gagggggacaccaacagcagcctggaggattttgagggggaaagtgaccaggagagcatg
gcaccccctttgaagcccaagaaaaaaagaagtagttcgtttgttctccccaagattgtg
aaatctcagctacggaaagtcagtggagttttcagttctttcatgacccccgagaagagg
atgattaagaaaattgcagagatgtcacgggacaaacgcacctattttggatgcttagta
caggactatgtcagttttctccaagaaaacaaggagtgccatgtttcgagcactgatatg
ctgcaaacaattcgtcagttcatgacccaagtcaagaactacttgtcccagagctctgaa
cttgatcccccaatcgaatcactgattcctgaagaccaaatagatgttgtgctggagaag
gccatgcataagtgcattctgaagccgttgaagggtcacattgaagcgatgttgaaagag
tttcataccacagatggttcctggaaacaactgaaggaaaacctgcagctggtgcggcag
aggaatcctcaggaactgggcgtgtttgttccaacaccagactttgtggaccttgaaaag
attaaagtcaagttcatgactatgcggaagatgtattcacctgaaaagaaagtcatgctg
ttgctgagagtttgcaaattgatatacactgttatggagaataactcagggaggctgtat
ggagctgatgacttcttgcctgtgttgacatatgtgctagcccaatgtgatatgctggag
ctggataccgaaatcgaatacatgatggagttgttggatccatccttgctgcatggagaa
ggaggctattacttgacaagcgcttatggagcactttcactgatcaagaacttccaggaa
gaacaagctgcccagctgctcagttcagaggccagagatactctccggcagtggcacaag
aggaggacaacaaacaggacaataccttcagttgatgattttcagaactaccttcgtgtt
gcattccaggaagttaccagcggctgtacaggaaagactttgctagtacggccatatatc
actactgaagatgtatgtcagctttgtgctgagaagtttaaagtggcaaatccagaagaa
tacaggctgtttctttttgttgatgacacctggcaacaactgacagaggatacctaccct
cagaagatcaaggctgaattgcacagccgtccgcagccccaggtctttcactttgtctac
aagcgcgttaacagtgacccatatggggcaattcttcagaacagcaataattcagctgct
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