Taeniopygia guttata (zebra finch): 100228986
Help
Entry
100228986 CDS
T01082
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X2
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100228986 (CHD6)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100228986 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HTH_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
100228986
NCBI-ProteinID:
XP_012425606
Ensembl:
ENSTGUG00000003179
LinkDB
All DBs
Position
20:513378..612208
Genome browser
AA seq
2731 aa
AA seq
DB search
MIMKIQEKEKQPPSLKTLSLSPMSSAWECKTQDTFASSEEQDKVPHQVTVTATNTGGQCQ
CPKEEPSGAAQKRTSAQNGMQDSGGTGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKE
PKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKESKDKKSGSEPAPRSRSKKSSKDTP
VEKKKKGKRKNEIPVNSLDLDQDLPSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLD
FKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGL
AFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFN
PDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQI
PPEIKHMVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD
EMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISR
QMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNR
NCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEE
QVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA
NQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHCPEAPDFQLQAMIQAAGKLV
LIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFC
KPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYR
LITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMD
EEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKW
AKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRLN
EKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYK
GDDKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLAT
CNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPD
IDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGI
SDGAQDATERGIMEKEENSGEKLEGLSKQEDIVAAGVGEASEKRDEPAAAQDGSDSDRSC
WPVSSALTARLRRLVTVYQRCNRKELPPRTEMLVPGNHGYWLQDEMFRRASEMDLMNKEM
QKRWTRREQADFYRTVSSFGIIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMC
KNVCGLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHERLKLCQ
PSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTGLPGP
ETLCCLYQSNSKLYSSPVYSQMDQSCETLENEAESHIKLEPVDSTMSQAGGSPLDTHCET
FMSEVRDIISSNYDESSLPDSLVCMMYDEKTCPSEQSSLTRDSPSCTDVGSSVAKLSEGK
LEGDEDPSSCDADAMREVPFLEGLQVVSDQMDNQNEEAEPSPSTPDSNPSQSAPSKLSKG
LEQKGALASPATGLPEHGTMERVLSVGLYSPSLHNYELKVPPEQRFISLLQEKGLKAKSG
PSQSHSEEDEEEEEDDDNSEAAADAEEGLNGSRTRADFDPEAHELGGEEQSSGLPTPEDT
CPEDLNGERESLGLGEPGAEVREDCGLNEESTQQHSPGQAQSQPFSLPAPLPQGGPLGAE
APCVRGEPLGQGAEGQTGCTETLHPEPQGIKQEECENRDDGEKASSNQSQDGPEKYLEEE
NKNSASVLPGEIDDLQDARAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHAILKGKW
PSSSQQFEAQSLLTAPAMASNTGSRSSFTESEAPDPTFNNGVLMSRVQKEGFLSPTFAKD
ERKHRRPYEFEMERDAKQRSLEQLAAAHVHPPIVLNGWREAAVDLSRGSDGSPGNSSPFP
LNTNVPKLGTVNALQSSLGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRRKNV
EGMDLIFLKERPLPNRLQDVQEDQPQPPQNSPLPDGPVAATSTPQPVPAAGSQEKAVPNK
SLLDWLRQQSDYTLDVPSFGTNFSDKPKQRRQRCKDPNKLDISSLTGEERVPVVHKGTGR
RLGGATAPALKELPRWLDANLEYAVAADWADIVKLSGYLPENKFNRILSEPVLRDTGPRR
RGRRPRNELLKGPGVVADSSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFPAGF
AAVPSGEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNSPMTTTCTATAPTSLTSTTKGGT
ASTEKANEEKQGSQDGKREPLTEDKPGPSSFSNQTESAITTSSPVAFNPFLIPGMSPGLI
YPSMFLSPGIGMALPGIQQTRHSEAANLETQKRKRKKAKGELANPEPETVSLPEKEAANS
QNCAQQSLSVVAEKEQDGPAEEERQAAHDTD
NT seq
8196 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacaggaaaaagaaaagcagccgccaagcttaaaaacactgagcctc
tccccaatgtcgtctgcctgggagtgcaagacgcaggatacctttgccagcagtgaggag
caggacaaggtgccccaccaggtgacagtgacggccacaaacacaggtggccagtgccag
tgcccaaaggaggagcccagtggggctgcccagaagcggacaagtgcccagaacgggatg
caggacagtgggggaacgggggtgaagaagaaacggaagaaaaaggatctgggagagcag
gaagggggagataaagcagctgtggaggtgaaaccaaagaggaggagagagcctaaagaa
ccaaaagagcctaaaaaggtgaaggagtctaagaagccgaaggagcctaagcagagggag
gtggctaagaagccccggaaacctcgggaacccaaagctccaaaggagtctaaagacaag
aagagtggctctgagccagcccctagatcaagatccaagaagagcagcaaagacacccct
gtggagaagaagaagaaagggaagaggaaaaatgagatcccagtgaacagtttggatttg
gatcaggatctcccgagcccatctgtacagagcccagaggagtctgcagagtcagctgac
agccagaaacgacgctcaggacggcaggtgaagaggaggaagtacaacgaggacctggat
ttcaaggttgtggatgatgacggcgagacaattgccgtgctgggagctgggcgaacctcc
gcgctctcagcctctactctggcatggcaggcagaggagcctcctgaggatgatgccaat
ataattgagaagatccttgcctccaggatggtgcagaaagaggctcatcctggaggccta
gcatttgagacagaggagttctacgtcaagtacaggaacttctcttacctccactgtaaa
tgggcaacgctggaggagctggagaaggaccccaggatctcacagaagataaagcgcttc
cggaacaagcaggctcagatgaaacatatttttactgagcctgatgaggatttgttcaac
cctgactacgtggaggtagatagaattctggaggtggctcacacaaaggaccctgacact
ggggaggaggtgactcactacttggtgaagtggtgctcactgccctatgaggagagcacc
tgggagctggaggaggatgttgacccagggaagattaaagagtttgaagctctccaaatc
cctccagaaatcaagcacatggtaacgtaccctgaggagcgcccagcatccgaatcctgg
cagaagctggagaagtcccgggagtacaagaacagcaaccagctgcgggagtatcagctg
gagggaatgaactggctgctctttaactggtataacaggaagaactgcatcctggctgat
gagatggggttggggaagacaatccagtcaatcactttcctctcagagatattcctgatg
ggcatccatggccccttcctcatcattgcacctctctccaccatcacgaactgggagagg
gagttccgcacctggacagagatgaacgccatcgtgtaccatggcagccagatcagccgg
cagatgatccagcagtatgagatggtgtacagggacacacagggtaaccctctccctggg
atcttcaagttccaggtggttatcaccacctttgagatgatccttgctgactgtccggag
ctgaaaaagatccagtggcgctgtgtggtcattgacgaggcacatcgtctaaagaacagg
aactgcaaactcctggaggggctgaagctcatggccctggagcacaaggtgctgctaaca
ggtacccccctgcagaactcggtagaggagctcttcagcctcctaaattttctggagcca
cagcagttcccctcagagacagcctttctggaagagttcggagacctgaagacagaggag
caggtgaagaagctgcagtccatcctgaagcccatgatgctgcgacggctgaaggatgat
gtagagaagaatctggcacccaagcaggagaccatcattgaggtggagctgaccaatatc
cagaagaaatactaccgggccatcctggagaagaatttctccttcctctccaagggtgcc
aaccagcacaatatgcccaacctcatcaataccatgatggagctgcgcaagtgctgcaat
cacccatacctcatcaatggggcagaggagaagatcctggaagacttccgtaaaacacac
tgcccagaggcaccagacttccagctgcaggcgatgatccaggcagctgggaagctggtg
ctcattgacaagctgcttcctaagctgattgctggtgggcacaaggtgctcatcttctca
cagatggtgcgctgccttgacatcctggaggactatctcatccagagacggtacacctat
gagcgcattgacgggcgggtgcgcggcaacctgcgccaggctgccatcgaccgcttctgc
aaacccgactcggatcgctttgtctttctcctgtgcacgcgggcaggcgggctgggcatc
aacctgaccgctgctgacacctgtatcatcttcgactccgactggaacccacagaatgat
ctgcaggctcaagctcgctgccaccgtatcgggcaaagcaaggccgtgaaggtctatcgc
ctcatcaccaggaactcctatgagcgggagatgttcgacaaggccagcctgaagctgggc
ctggataaagctgtgctgcaggacatcaaccgcaagggcagcaccaatggggttcagcag
ctctccaagatggaggtggaggacctgctgcggaagggtgcctatggcgcactcatggat
gaggaggatgaggggtcaaagttctgtgaggaagacattgatcagatcctccagcgcagg
acacagaccatcacaatccagtctgaaggaaagggctccacattcgcaaaggccagcttt
gtagcatcaggaaacagaactgacatttccttagatgaccccaacttctggcaaaagtgg
gccaagatagcagagcttgatacagatgccaagaatgaaaaggagagcctggtcattgac
agaccccgggtgcggaagcaaacgaaacattacaactccttcgaagaggacgagctgatg
gagttctctgagctggacagtgactcggatgagcgacccacacgctcgcggcgcttgaac
gagaagacgcggcggtacctgcgggctgagtgcttccgtgtggagaagaatctgctcata
tttggctggggacgctggaaagatatcctgacccatgggcggttcaagtggcacctgaat
gagaaggacatggagatgatttgtcgggccttgctggtgtattgcgtcaagcactacaag
ggggatgacaagatcaagagttttatctgggatctcatcacaccgacaaaggatggccag
aatcaggctctgcagaatcactcaggcttgtcagcaccggtgcccagaggcaggaagggg
aagaagacgaagaaccagatgctgcttcctgagataaagaatgcagactggcttgccacc
tgcaaccccgaggtggtgctccatgatgacagctacaagaagcacctcaaacaacactgc
aataaggttctgctgcgggtgcgaatgctctactacctgaaggctgaagtactgggggag
gctgcggataaagcctttgagggcacccctgccagggagctggatgtgctgctgccagac
attgactatgtggagatcccagtggactggtggaatgccgaagccgataaatccctgctc
atcggtgtcttcaagcacggttacgagcggtacaacgccatgcgggcagacccagcgctg
tgtttcctggagaaggtgggcatgccagatgagaagctgctctctgccgagcagggcatc
agcgatggggcacaggatgctaccgaaaggggcatcatggagaaagaagagaacagtgga
gaaaagctggaggggctgtcaaaacaggaggacatcgtggctgctggggtgggtgaagcc
agtgagaagcgggacgagccagcggcagcccaggatggctctgactcagacagatcctgc
tggcctgtctcctctgctctcacggccagactgcggcgacttgtcactgtctaccagcgc
tgcaaccgcaaggagctgcctccccgcaccgagatgctggtgcccggtaaccatggctac
tggctgcaggatgagatgttccgcagggcctctgagatggacttgatgaacaaagaaatg
cagaaaaggtggaccaggagggagcaggcagacttctaccgcactgtctcctcctttggg
attatctatgaccaagagaaaaaaatctttgactgggcccagttccgagccatctcgcga
ctggagaagaagacggatgagagcctggagaagtacttctacagctttgtggccatgtgc
aagaatgtctgtggtctccctttatggaaagaggatggtcctccagaccctgacatctat
gtggagcccatcacggaggagcgtgctgccaggaccctgtaccgcatcgagctgctgcgg
aaggtgcgcgagcaggtgctcaagtgcccccagctccacgagcgcctcaagctgtgccag
cccagcctctacctgcccgtgtggtgggagtgtggcaaacacgaccgggacctgctgatc
ggcactgccaagcacggcctgaaccgcactgactactacatcatgaatgacccccagctg
tcttttttagacgcatacagaaactatgcccagcataaaagaacagggctcccaggccca
gaaaccctgtgttgcctttaccagtctaactccaaactctacagttcccctgtgtacagc
cagatggaccagtcctgtgaaaccctggagaatgaagccgagagtcacatcaagctagaa
cctgtggacagcaccatgtcccaggctgggggcagcccactggacacacactgtgaaaca
ttcatgtctgaagtccgggacatcatttccagtaactacgacgagagctcgctgccagac
tcactggtgtgcatgatgtacgacgagaagacctgtcccagcgagcagagctccctcacc
agggacagcccaagctgcacagatgtcggaagcagcgtcgccaaactctctgagggcaag
ctggagggggatgaggatccgtccagctgcgatgcagatgccatgagagaggttcccttc
ctagagggtttgcaggtggtctctgaccaaatggacaatcagaatgaggaagctgagcct
tcaccttctacccctgacagcaatccctcacagagtgccccatccaaactcagcaaaggc
ttggaacagaaaggagcacttgccagcccagcaacagggctccccgagcatggcaccatg
gaaagggtcctaagtgttgggctctacagtcccagtctccataactatgaactaaaggtt
cctcctgagcagaggttcatcagtctgctgcaggagaaaggactgaaggcaaagtcgggg
ccaagtcagagccacagtgaggaagatgaggaggaagaagaggatgatgataactctgag
gcagcagcagatgccgaggaaggcttgaatggttccaggaccagggctgattttgaccct
gaggctcatgaactggggggtgaggagcagagctctggtctccccacacctgaggacact
tgcccagaagatttgaatggcgagagagagtccctgggtctgggggagcccggggcagag
gtcagggaggactgtggcttgaatgaggagagcacccagcagcattcaccgggccaggct
cagagccagcccttcagcctgcctgcacctctgcctcagggcgggcctctcggggcagag
gctccctgtgtcaggggggagcccttggggcaaggtgctgaggggcagacaggctgcaca
gagaccctgcaccctgagcctcagggcataaagcaagaagagtgtgagaacagagatgat
ggggagaaagccagcagtaaccagagccaagatggtccagagaagtacttggaggaagag
aacaagaattctgcttctgtcctgccaggggagattgatgatcttcaggatgcccgggca
ccaaccattgcccagctgctgcaggagaagacactttattccttctctgagtggcctaag
gaccgtgtgatcatcaaccgcattgacaatatctgccatgccatcctgaagggcaagtgg
ccttcctccagccagcagtttgaggcacagagcctgctaacagccccagccatggccagc
aacaccggcagcaggagcagctttacagagtcagaagcccctgatcccaccttcaataat
ggggtcttaatgtcacgggtacaaaaggaaggtttcctgagccctacctttgcaaaagat
gagcggaagcacaggagaccctatgaattcgagatggagagagatgccaaacagaggagt
ctggagcagcttgcagcagcccatgtccatccacccattgtgctgaacggctggcgcgag
gcagcggtggacttgtccagaggctcggatgggtccccagggaactcctctcctttcccc
ctgaacacaaacgtgcccaaactggggaccgtgaatgccctccagagctccctgggcatg
gacttgtctggcatcctacaggcagggttaatccatcctgtcactggacaaattgtaaat
ggcagcctccgaagagatgatgctgccatgaggaggagacggggcaggaggaaaaatgtt
gaagggatggacctcatcttcttgaaggagaggcctcttccaaacaggctgcaggatgtt
caggaagaccagccacagccccctcagaacagccccctccctgatgggccggttgcagct
acctcaactccacagccagtcccagctgcaggcagccaagagaaggctgtcccgaataag
agtctccttgactggctccggcagcagtctgactacacactcgatgtccccagctttggc
acaaatttttcagacaagcccaagcagaggaggcagcgctgcaaggaccccaacaaactg
gacattagctctctgacgggagaggagcgagtgccggtggtacataagggtaccggacgg
cggttagggggagccacggcaccagcattgaaggagttgccaaggtggcttgatgcaaac
ttggagtatgctgttgcagctgactgggctgacattgttaagctttcaggctacttaccc
gaaaacaaattcaatcgcatcctcagcgagcctgtgctccgggacactgggccgcgacgg
agagggaggaggccccggaatgaactccttaaaggccctggtgttgtagcagattcttct
ggaatgggaccactgttcatgaatggactaattgctgggatggatctagtgggacttcag
aacatgagaaatatgcaagggatccctctgaccgggctggtcgggtttcctgctggcttt
gcagcagtgccctctggtgaggatgtgaagagcaccctgagcatgttgcccatgatgctc
ccgggcatggcgactgtaccccagatgttcggggtgggaggactcctcaactccccgatg
accacaacttgcactgcgactgctccgacttcgttaacaagcacaacgaaaggtggcaca
gccagcaccgaaaaagccaatgaggagaaacagggcagccaggatgggaaaagggaacct
ctcactgaagataagcctggtcctagttcattttctaatcagacagaatctgcaataact
accagtagtcctgtagcttttaacccatttcttatcccagggatgtctcctggactgatc
tatccctccatgttcctttcccctggcatcggcatggcgctgcctggcatccagcaaacc
aggcactcggaggcggcgaacctggagacccagaagcggaagaggaagaaagcgaaaggg
gaattggcaaatccagagccagaaactgtctcactgccggaaaaagaagctgctaacagt
caaaactgtgcgcagcagagcctgtcagtggtggcagagaaggagcaggacggaccagca
gaggaggagcgccaagcagctcatgataccgattag
DBGET
integrated database retrieval system
