Taeniopygia guttata (zebra finch): 100229072
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Entry
100229072 CDS
T01082
Symbol
SBNO2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100229072 (SBNO2)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100229072 (SBNO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
100229072
NCBI-ProteinID:
XP_030112556
LinkDB
All DBs
Position
28:complement(3915228..3967541)
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AA seq
1405 aa
AA seq
DB search
MDGGNSFPQHQQPGDAIRGIPGLRSQLVVPDLENPMLAADSWSSCYPVSFPTSSFPSENQ
QYFSPPQDFYMDSISRPHFLDTNYAAVDPTDFLTKNGDFPQDSSYLDELSNNNSLFSSPP
DSLSEIADPKDFLPADSLSHVPTLWDVNTPQQNQIELFPVSAAFPGLNSSSDHVPAVPNT
PLLISYQSQAPAEEEDEGEEEETEELGQTETYAEYIPSKSKIGKHHPDLVVETSTLSSVP
PPDITYSLSLPCSVADKGSLSALQLEAIIYACQQHEVLLPSGQRAGFLIGDGAGVGKGRT
VAGIIFENYLKGRKKALWFSVSNDLKYDAERDLKDIEASHIPVHALNKIKYGDTATSEGV
LFATYSALIGESQAGGQHRTRLKQILEWCRENFEGVIVFDECHKAKNASSTKMGKAVLDL
QNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRAFDEFLHAIEKRGVGAMEIVA
MDMKVSGMYIARQLSFTGVTFRIEEIPLDEQYKAVYDKAAKLWAEALMVFQQAADCIGLE
SRKSLWGQFWSAHQRFFKYLCIAAKVRRLVELAQEELARDKCIVIGLQSTGEARTREVLD
ENDGRLNCFVSAAEGVFLSLIQKHFPSTKRKREKGTGIKRKRRPRGRCPKALRGPCDQGV
VIKISDDSSTESDMGLDSDLTSSPESLLETDDVIFVDHTFGGCPGEDRGGFHMLPSQKEL
HNLRELKVEKMKQDLLTKVKALGKELPLNTLDILIDYFGGPENVAEMTGRKGRVVRRPDG
SVVFESRAEQGLSIDHVNLKEKERFMQGEKLVAIISEASSSGISLQADRRVKNQKRRVHM
TLELPWSADRAIQQFGRTHRSNQVSAPEYVFLISELAGERRFASIVAKRLESLGALTHGD
RRATESRDLSKYNFENKYGAKALDKVLNTILSHTESRVPVPRSYERGEDTFFREMKEGLI
SVGICCSQMKYGTVSVEKDCSITKFLNRILGLEVDKQNMLFQYFSDTFDYLIEKDKKEGK
YDMGILDLAPGVDEIYEESKEVFLTPGHPQDGQVVFYKISVDRGLKWEEAYEKSLKLTGT
FDGFYLSNKVRGNKHTCLLAEQCRGKNFILYKPNIGKQSQLESLDSLQKKYQRVRPEEAK
EHWESSYHFSLKKCNHAIWNKSCKQIQEGKDCFQGMRLRHYYMLCGALLRVWSRIAGIMA
DITSSSYLQIVRLKTKEKKKQVGIKIPESCVHRVREELKQMDEDVKRKQSRLLQAQEQSS
PFSLPLHMLPGPGLPLPSLCHDEILDLTYSPPSSSIPDLVLSAEARAPCFSSEPPLQPQQ
PQHRLSFGFGHAPGLEGSTAPGPSLHEPPAAHLQQPQEGYLQQENINYREVLEDMLRTIT
GPSQENMLAPERQSVIQFSGPFSDF
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggatggggggaacagcttcccgcagcaccagcagccgggcgatgccatccgcggcatc
cccggcctccgctcccagctcgtcgtgccggacctggagaatcccatgctggccgccgac
tcatggagtagctgctacccagtctctttcccaacctcatccttcccaagtgaaaaccag
caatattttagcccccctcaggatttttatatggattccatcagcagaccacatttctta
gatacaaactatgcagctgtggaccccactgacttcttaacaaaaaatggggattttcct
caggattcttcatacctcgatgagctctccaacaacaactccctcttctcgtcccccccg
gattccctgtcggaaatcgcggatcccaaggacttcctgcccgccgacagcctgagccac
gtgccaacactatgggatgtgaacacaccgcagcagaaccagatcgagctgttcccagtc
agcgccgcgttccctggcctgaacagctccagtgaccacgttcctgctgtccccaacacc
ccactcctcatcagctaccagtctcaggctcctgcagaggaggaggatgaaggtgaggag
gaagaaacggaagagttggggcagacggagacatatgcagaatatatcccttcaaagtcc
aagattgggaagcaccatcctgacctggtggtggagacgagcaccctgtccagcgtcccc
ccgcctgacattacctacagcctttccctgccctgctccgtggctgacaaaggctccctg
tctgcactacagctggaagccatcatctacgcctgccagcaacatgaagttttattgccc
agtgggcagcgagctgggtttctgatcggggatggtgctggagtcgggaagggcaggact
gttgcaggcatcatctttgaaaattatcttaaagggaggaaaaaagctctgtggttcagc
gtctccaatgatctcaagtacgatgctgagagggacctgaaggacatcgaggcctcccac
attcctgtgcatgctctgaacaagattaaatacggtgacacagctacctcagaaggagtc
ctctttgccacctactcagcactgatcggtgaaagccaggctgggggacagcacaggacg
cgcttaaaacagattttggagtggtgcagggaaaactttgagggagttattgtgtttgat
gaatgccacaaagccaaaaatgccagctctaccaaaatgggcaaagcagtgctggacctg
cagaacaagctgcctcgagcacgggttgtctatgccagtgccacaggtgcctcggagcca
aaaaacatgatttacatgagccgcctgggcatctggggggagggaaccccgttccgagcc
ttcgatgagttcctacacgcgattgagaagaggggagtcggcgcgatggagatcgtggcc
atggacatgaaggtcagtgggatgtacattgctcggcagctcagcttcactggggtgacc
ttcaggattgaggagatccctctggatgagcagtacaaggctgtctacgacaaggcagcc
aagctgtgggcagaggccttgatggtgttccagcaggcagctgactgcatcgggctggag
tctcggaagtcgctgtggggtcagttctggtcggctcaccagcgcttcttcaagtacctc
tgcatcgccgccaaggtgcggcgcctcgtggagctggcccaggaggagctggccagggac
aagtgcattgtcatcggcctgcagtccacgggagaggctcgcaccagggaggtcctggac
gagaacgatgggcgcctcaactgctttgtctctgctgcagaaggcgtctttctatcacta
attcagaagcactttccttcaaccaaaagaaagagagaaaaaggaactggcattaaaaga
aaacggcgtcccaggggccgctgccccaaggctctgcggggcccgtgtgaccaaggggtc
gtcatcaagatcagcgatgacagcagcaccgagtccgacatggggctggacagcgacctc
acctcctccccggagtccctgttagagacagacgatgtcatcttcgtggatcacaccttc
ggaggctgccctggcgaggacaggggtggtttccacatgctgccttcccagaaagagctg
cacaacctgagagagctgaaggtcgaaaagatgaaacaggacctcctaacaaaagtgaaa
gcactgggcaaagagctacctctcaacaccttggatatactgattgattattttgggggc
ccagaaaatgtggccgagatgacgggcaggaagggacgggtggtccgcaggcccgacggc
tccgtcgtcttcgagtcccgcgccgagcaagggctctcaattgaccacgtcaacctgaag
gagaaggagcgtttcatgcagggggaaaagctcgtagccatcatctcagaggcctccagc
tcagggatctccctccaagcagacagacgggtgaagaaccaaaagcgccgggtgcacatg
accctggagctgccctggagcgcagaccgagccatccagcagtttggccgaacgcaccga
tccaaccaggtctctgctcccgagtacgtgttcctcatctcggagctggcaggggagagg
aggtttgcatccattgtggcaaaacgcctggagagcctgggtgccttaactcacggggac
cgacgggccaccgagtcccgagacctcagcaagtacaacttcgagaacaagtacggggcc
aaagccctggacaaggtcctgaacacgatcctcagccacacggagagcagggttcctgtg
cccaggagctacgagagaggcgaggacacctttttccgtgaaatgaaggaagggctcatc
tccgtgggcatctgctgcagccagatgaagtatggcactgtctccgtggagaaggactgc
tccatcaccaaattcctgaaccgtatcctgggcctggaggtggacaagcagaacatgctc
ttccagtatttttctgacacttttgactacctgattgagaaggacaagaaggagggcaaa
tacgacatgggcattcttgatttagccccaggagtggatgagatctacgaggagagcaag
gaggttttcctgaccccggggcacccgcaggatgggcaggttgtgttctacaagatcagc
gttgacagaggcttaaagtgggaggaagcctatgagaagtcactcaaactgacaggaacc
tttgatgggttctacctctccaacaaggtgcgaggcaacaaacacacctgtctgctggca
gagcagtgccgtgggaagaatttcatcctctacaagccaaatattgggaagcaaagccag
cttgagagcctggacagtctgcagaagaaataccaacgggtgcggcccgaggaagccaag
gagcactgggaaagcagctaccacttctccttgaagaagtgtaaccatgccatatggaac
aagagctgcaagcagatccaggaggggaaggattgcttccagggcatgcgcctgaggcac
tattacatgctgtgcggggccctgctgcgggtgtggagcaggatcgccggcatcatggca
gacatcaccagcagcagctacctgcagatcgtgcgcctcaagaccaaggagaagaagaaa
caagtcgggataaagatccccgagagctgcgtccacagggtgcgggaggagctgaagcag
atggacgaggacgtgaagaggaagcagagccggctgctccaggcccaggagcagagctca
cccttctccctgccactgcacatgctgccagggcctgggctgcccctgccctccctgtgc
catgacgagatcctggacttgacctacagccctcccagcagcagcattcctgacttggtg
ttgagcgcagaggccagagcgccctgcttctcctcggagcccccgctgcagccccagcag
ccccagcacagattgtccttcggctttggccacgctcctggcctggagggcagcacagcc
cccggcccctcgctgcatgagccccccgcagcccacctgcagcagccacaggagggttat
ctccagcaagagaacatcaattacagagaggtgctggaggacatgctgaggacgatcacc
gggccctcccaggagaacatgctcgccccggagcgccagagcgtgatccagttcagcggg
cctttctcagacttctga
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