Taeniopygia guttata (zebra finch): 100229297
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Entry
100229297 CDS
T01082
Symbol
RNPS1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03013
Nucleocytoplasmic transport
tgu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100229297 (RNPS1)
03015 mRNA surveillance pathway
100229297 (RNPS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100229297 (RNPS1)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100229297 (RNPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
100229297
NCBI-ProteinID:
XP_012431980
Ensembl:
ENSTGUG00000003237
LinkDB
All DBs
Position
14:16103615..16112321
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AA seq
289 aa
AA seq
DB search
MSLKQKAPSPTKRKDRSEEKSKDRSKDKAAAKELSEKDRGRDKTRKRRSASSGSSSTRSR
SSSTSSSGSSSSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSR
SKSKPPKRDEKERKRRSPSPRPTKVHVGRLTRNVTKDHIMEIFSTYGKIKMIDMPVDRLN
PHLSKGYAYVEFENPDDAEKALKHMDGGQIDGQEITATAVLAPRPRPPPRRFSPPRRMLP
PPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaaagcagaaggctccctcaccaaccaagcgcaaggacaggtcagaagagaaa
tcgaaggaccggtccaaggataaagcagctgctaaggaattgagtgaaaaggatcgtggt
cgggacaaaacacgcaaaagacgcagtgcctccagtgggagcagcagtaccaggtcccgt
tccagctcaacttccagctcagggtccagttccagcactggttctagcagtggctcaagt
tcctcttctgcctcgagccgctctgggagctccagcacctcacgcagttcaagttcaagc
agctcttctggctctcccagtccttctcgacggagacatgacaataggagacggtcccgc
tccaagtccaaaccacccaagagagatgaaaaggagcggaagaggcggagtccatcaccc
agacccacaaaagtgcatgttggaaggctcactagaaatgtgacaaaggatcacataatg
gaaatcttttccacttatggaaagattaaaatgatcgacatgcccgttgacaggttaaac
ccacacctctccaaaggttatgcttacgtggagtttgaaaacccagatgatgctgagaaa
gccctgaaacacatggatggaggccagattgatggtcaggagatcacggccacagctgtg
ctggcaccacggcctcgaccaccccccagacgcttcagccccccgaggaggatgctgcca
ccaccgccgatgtggcgcaggtccccccctcgcatgaggaggaggtcccgctctcctcgg
cgcagatcccctgttcgccggcggtcccgatccaggtctcccgggcgaaggcgccatcgc
agccgctccagctcaaactcctcaagataa
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