Taeniopygia guttata (zebra finch): 100229381
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Entry
100229381 CDS
T01082
Symbol
FMOD
Name
(RefSeq) fibromodulin
KO
K08121
fibromodulin
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100229381 (FMOD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tgu00535
]
100229381 (FMOD)
Proteoglycans [BR:
tgu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
100229381 (FMOD)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRRNT
LRR_6
LRR_5
LRR_14
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
100229381
NCBI-ProteinID:
XP_030147967
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Position
26:complement(2455208..2466743)
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AA seq
382 aa
AA seq
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MPWATTLILILAGLCGSSLGQYNEEEDLAWLQYYLRQSRVSSYNYVPYYEEESPAYAYSY
PSATDSEPEPEPEPQQAAPWRCPQECDCPPNFSSAMYCDTRNLRYLPFVPSRMKYVYFQN
NLITSVQEGAFDNATELEWLALHNNQIGSEKMGKRVFGKLQRLERLYMNNNNLTRLPGPL
PRSLRELHLSYNHISKVPSNALEGLENLTALYLSHNFIFEMGASLKGLKSLILADLSYNN
LRKVPDGLPASLEQLYLEYNYINAIPDDYFQVSPRLLYVRMSHNSLTNQGLSSNTFNSSS
ILELDLSYNRLQKIPRVNTNLENLYLQGNQINEFSISSFCSVVDVMNYSRLQVLRLDGNA
IKRNAVPPDAPLCLRRATVIEI
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgccttgggccaccaccctcatcctcatcctggccgggctctgcggctcctccctgggc
cagtacaacgaggaggaggacctggcgtggctccagtactacctgcggcagtcccgcgtc
tcctcctacaactacgtgccctactacgaggaggagagccccgcctacgcctactcctac
ccctcggccaccgacagcgagcccgagcccgagcccgagccgcagcaagccgcgccctgg
cggtgtccccaagagtgtgactgtccccccaacttctcctcggccatgtactgcgacacc
cgcaacctgcggtacctgcccttcgtgccgtcgcgcatgaagtacgtttatttccagaac
aatctgatcacctccgtccaggagggcgccttcgacaacgccacggagctggagtggctg
gcgctgcacaacaaccagatcggcagcgaaaagatggggaaaagggtttttgggaagttg
cagcgcctggagaggctctacatgaacaacaacaacctgaccaggctgcccggcccgctg
ccgcgctcgctgcgggagctccacctctcctacaaccacatctccaaggtgccttccaat
gctctggaggggctggagaacctcacggcgctctacctcagccacaacttcatcttcgag
atgggcgcgtccctcaaggggctcaagtcgttgatcctggccgacctgagctacaacaac
ctcaggaaggtccccgacgggctgccggcctccctggagcagctctacctggagtacaac
tacatcaacgccatccccgacgattatttccaggtgtcccccaggctgctctacgtgagg
atgtcccacaacagcctgaccaaccaagggctctccagcaacaccttcaacagcagcagc
atcctggagctggacctctcctacaaccggctgcagaagatcccgcgggtcaacaccaac
ctggagaacctctacctgcaggggaaccagatcaacgagttctccatcagcagtttctgc
tccgtggtggacgtcatgaactactcgcggctccaggtgctgcggctggacggcaacgcg
atcaagcggaacgcggtgcccccggacgcgccgctgtgcctgcgccgggccaccgtcatc
gagatctga
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