Taeniopygia guttata (zebra finch): 100229394
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Entry
100229394 CDS
T01082
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X9
KO
K10779
transcriptional regulator ATRX
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100229394 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100229394 (ATRX)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100229394 (ATRX)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
100229394 (ATRX)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100229394 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
100229394
NCBI-ProteinID:
XP_012428564
Ensembl:
ENSTGUG00000005896
LinkDB
All DBs
Position
4A:complement(16915389..16982329)
Genome browser
AA seq
2383 aa
AA seq
DB search
MENNRDEGSSSSERNKSLGSSRSKRKPTVVTKYVGSDDEQIVDETVNEDISNENSENDVD
MQSLPKGTVVVQPEPVLNEDRDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACG
QQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFC
HNAFCKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNK
KKMRVENEKSKIYDHTVKFSPKRNNANCNGEEKKIDNSYSGSLTYSYKALMVPKDLLKKT
KKLIETTTNLNSSFVSFLKNAAENVEISPAVQLCQLKAFKSVLSDMKKAHLSLEEGLNLE
IQALNVKIKDKNTKEKKTEVRSEKNEVKKDEGKEHAALQEDDATQTQKKVVSEQPDNEPM
DQSVPSAEQTDNKAAPGEEKKAGNNEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESA
MEIQMPSDEQDSGNTAADHEAPNSNTKANAPVKDTKGGTKLKSSAKGTKELIVKLTPVSL
SESMVKGEDQDNSLEKESKDIDASKDVDACKDADTSQPRAADSDSGKQNHNVGSEPSMED
DAVPVEDSDLRRSPRVKTTPLRRPTDISPLTPNSEEDSNDTSNEKQRRKPSKQPRTKNDK
RNTSDSAADGPSPNKLSKSKKPYDLGHSSDSDEVPAVLKEAGMMSRSSSDSESNSEAPAK
NQKTADFQKSQQVKDENGKRKRKSSSSGSDLDAKRGKSPKNAAATKKKRQNYSDSSNYDS
ELEKEIQMLSKIDAAKKSKKKFSRKDDSYDSSEEEQRKKVSSKRKVNLKKKRDKSSEDDD
AEKSSPEKEINHSSKDKKMGKRSAAKDKISRDSKEKSAKGKRDESSDAEKSSLEKEESPE
VKKKKDLKKKKAQDDSSSESTEKSAKKDHKLESLKDRLENKKGSESKAKKSEKLKKKGFK
KDQDDSSSDLDKSSLEKGSSNSSENDKIRKEPVFTEKRKLRERVATRVHIDLSSDTEKSP
QKEESSDEDVMRHKKRTETKEKKKISHKKKISKKEQNDSSSSDEESYEDTKKKVKRGSVK
ESKKSNLKKKVAKKKVVVTSSSPSDKEENDDQNSTGDGSSDEQKIRPVTESLMLSADTGF
CQSSGEEGDALSRTMPMEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDTSSDEQPEEEK
KKPAKQTENTGDDGEKEKEDKKSEKEEANSESDSEEEETSKKPRYRHRLLRQKLTVSDGE
SGEEKKVVKPKDKKEGGKRRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRSAKK
AEAEENQRSYKQKKKRRRIKVQEDSSSENENKSNSENEDNDDSKSPGKGRKKIRKIIKDD
KLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKE
PLVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSF
LHTVLLCDKLDFRTGLVVCPLNTALNWLNEFEKWQEGLEDEEKLEVYELATVKRPQERSY
MLQHWQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNE
ASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNG
QCADSTPVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLY
QYYLDHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSM
DDFIASDSDETSMSLSSDDYAKKKKSKGKKVTKECSSSGSGSDNDVEVIKVWNSRSRGGG
EGNVEDLTNNPASTKSEEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEIL
RMAEELGDKVLVFSQSLISLDLIEDFLELANREKSERDQPPIYKGEGKWFRNIDYYRLDG
STTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSI
FRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELY
TFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEEEELTE
EERKAAWAEYEAEKKGMTMRFNMPAGTNTMPTNFSSQTYIPYNLGALSAMSNQQLEDLIN
QGREKVVEATNSVAAARIQPLEDIISAIWKENLTLTESQVQALALNRQASQELDVKRREA
IYNDVLGKQQMLIGCVQRILMNRRLQHQYNQQQQQQMSYQQAAMGHLMMPKPPNLIMNPS
SYPAIDVRGMYQSVSGGMQPPPLQRAPPPMRGKNAGPSQGKSM
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaacagggacgaggggagtagctcttcagaaagaaacaaatccttaggatca
tcccgttccaaaaggaaacctacagttgtaacaaaatatgttgggtcagatgatgaacaa
atagtagatgaaactgtaaatgaagatatttcaaatgagaactcagagaatgatgtagat
atgcaaagcttgcctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagac
agagatgattttaaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaa
gctcccaaaaagcgtggagaagaaggactccatggaattgtgagctgtacagcctgtggg
cagcaggtgaaccattttcaaaaggattcaatctatagacaccctacactaaaagtgctt
atttgtaagacttgctacaaatattacatgagtgatgacatcagtcgtgattcagatggg
atggatgaacagtgtaggtggtgtgctgaaggtggaaatttgatttgctgtgacttttgc
cataatgccttctgtaaaaagtgcattttgcgcaacctgggccgaaaggagctctcaact
atcctggatgaaaataaccagtggcactgctatatttgccacccagagcctttgttggac
ttggtcactgcgtgtgacagtgtctttgaaaatttagaacagttacttcaacaaaacaaa
aaaaagatgagagttgaaaatgaaaaaagtaaaatatatgaccacacagtaaagttttct
ccaaagagaaataatgcaaattgtaacggggaagaaaaaaaaatagataattcatattca
ggttcactaacatattcttataaagcactaatggtaccaaaagacttgcttaagaaaaca
aaaaaactgattgaaactacaacaaatctgaattctagctttgtaagctttctgaaaaat
gctgcagaaaatgtagaaataagcccagctgtgcaactgtgccagctgaaagcttttaaa
tctgtgctgagtgacatgaaaaaagctcatctgtcactagaagaaggcctgaacctggag
attcaagcattgaatgttaaaatcaaagataaaaataccaaagagaaaaaaaccgaggtt
aggtcagaaaaaaatgaggtgaaaaaagatgaaggaaaggaacatgcggcattacaagag
gatgacgccacacagacacagaaaaaagtcgtgtcggagcagcctgacaatgagcccatg
gatcaaagcgttccctcagcggaacagacggataacaaggcagctcctggggaagagaaa
aaggctggcaacaatgaagaaccccagtatgagcccaacagtacggaggctttagacatg
gatattgtgtccatcccctcatccgttcctgaagatatttttgagactctggaatctgct
atggagattcagatgccatcagatgagcaggacagtggaaacacagcagcagatcatgag
gctccaaattcaaatacaaaagcgaacgctcctgtgaaagataccaaaggtggtaccaag
ttaaaatcgtcggctaaaggaacaaaagaactgattgtaaaattgactccagtttccctt
tcagaatccatggttaaaggtgaagatcaagacaacagcctagaaaaggagagtaaagac
attgatgcatctaaagacgttgatgcatgtaaagatgctgatacatctcaacctcgggca
gcagattctgattctggaaaacaaaaccacaatgttggtagcgagccctccatggaggac
gacgctgtgcccgtggaagactcagatctccggaggtcaccacgtgtcaagaccaccccg
ctgaggcgtcctacagacatcagccccctgacacccaactcagaagaggacagcaatgac
acgagcaatgaaaaacagaggagaaaaccatccaagcaacccaggacaaaaaacgataaa
agaaatacttctgacagcgctgctgatggtcccagtcctaacaaactttccaaatccaaa
aagccatatgacttgggtcacagctcagactctgatgaggtgccagctgtccttaaagaa
gcagggatgatgagtcgcagctcctcagacagtgagagcaacagtgaagcgccagcaaag
aatcagaagactgcagattttcaaaagagtcaacaagtaaaggatgaaaatgggaaacga
aaaaggaagagttccagttccggttcagatttagatgctaaaagaggcaaatcacctaaa
aatgctgctgccactaaaaagaaacgacaaaactactctgattcttcaaactatgattct
gagttggaaaaagagatacaaatgttgagtaaaattgatgctgcaaagaaatcgaagaaa
aaattctcaagaaaagatgatagttatgattcctctgaagaagagcagaggaaaaaagta
agcagtaagagaaaggtaaatctgaagaagaagagagataaatcttctgaagatgatgat
gctgagaagtcttctccagagaaggaaattaatcactcttctaaagataaaaaaatgggt
aagaggtcagctgctaaggacaagataagcagagactcaaaagaaaaatctgcaaaggga
aaacgtgatgagtcatctgatgctgagaagtcttcactggaaaaagaggagagtcctgaa
gttaagaagaagaaggatttgaaaaagaaaaaggcacaggatgattcttcttctgagagt
actgagaaatcagcaaagaaagatcacaagttggagtccttaaaagacagactcgagaac
aaaaaaggatcagaaagcaaagcaaagaaatctgaaaaattgaaaaagaaaggtttcaag
aaagatcaagatgattcctcttctgatcttgataagtcatctctggaaaaaggaagtagc
aattcttctgaaaatgacaaaattagaaaggaacctgtgtttacagaaaagagaaaattg
agagagagagtagctacaagagtacacattgatttatcctctgatactgagaaatctccc
caaaaagaggagagttctgatgaggatgtcatgcggcataaaaaacgcactgaaacaaaa
gaaaagaagaaaataagccacaaaaagaagatttccaagaaagaacagaatgactcatcc
tcttctgatgaggagtcttatgaagacactaagaaaaaggttaaaagaggatcagtaaaa
gaaagtaaaaagagcaacttaaaaaagaaagtggcaaaaaagaaggtggtagtcacttcc
tcttccccgtctgataaggaagaaaatgatgatcagaattccacaggtgatggaagcagt
gacgagcagaagatcaggcctgtgaccgaaagcttgatgctgtctgctgatacaggattt
tgtcagtcatcaggagaggagggagatgctctatcaaggactatgccaatggaggaggaa
gatgatgatgatgacgaccctgagaatagaattgccaagaaaatgcttttagaagaaatc
aaagccaatctttcctctgatgaggatacgtcttcagatgagcagcccgaggaagaaaaa
aagaaacctgcaaagcaaactgaaaacacaggagatgatggagagaaggaaaaggaagac
aagaagtctgaaaaggaagaagctaattctgagtcggattcagaggaggaagaaacatcc
aagaagcccagatacagacacagactgctgaggcagaagctcactgtgagtgatggggag
tctggagaagaaaagaaggtggtgaaaccaaaagacaaaaaagaaggggggaagcgcaga
aatagaaggaaagtgagcagtgatgactccaatgactctgagttccacgagtctgcagtg
agtgaggaggtcagtgagtctgaggatgaccaacggccaaggaccagatctgccaaaaaa
gctgaggcagaggaaaaccagcgcagctacaaacagaaaaagaaacgaaggaggataaag
gttcaagaggattcatcgagtgaaaatgagaataagagtaactctgagaatgaggacaat
gatgactcaaaatctcctggaaaaggcagaaagaagatcaggaaaattattaaagatgat
aagcttagaacagaaacacaaaatgcacttaaagaagaagaagaaagaagaaaacgtata
gcagagagagaacgagaaagagagaaactgagagaggtgatagagattgaagatgcctca
cctctgaaatgtcccatcacaaccaagctggttttagatgaagatgaagaaaccaaagaa
ccattagtgcaggttcacaggagtatagtgaccagactgaaaccacaccaagtagatggt
gttcagttcatgtgggattgctgttgtgaatctgtaaaaaaaaccaagacatctcctggc
tctggctgcattcttgctcactgtatgggcctggggaaaacattacaggtagtaagtttt
ctccacacagtcttgctgtgtgacaagctggattttcggacaggtctggtcgtgtgtcca
ctcaacactgccttgaactggctgaatgagtttgaaaaatggcaagaaggtttagaagat
gaggagaaactagaggtctatgagctggcaactgtgaaaaggcctcaggagaggagctac
atgctgcagcactggcaggatgagggaggtgtgatgatcattggctacgagatgtatcga
aacctggcacaaggcaggaatgtgaagagtagaaaacttaaagaaatatttaataaagct
ttagttgaccctggtcctgacttcgtggtgtgtgatgaaggacacatattgaaaaatgaa
gcatctgctgtctccaaggcaatgaattctattaaatctaggagaagaataattctgaca
ggaacaccactgcagaataatcttatagaatatcactgcatggttaacttcattaaggag
aatttgcttggctcaattaaggagttccggaaccgattcatcaatcccatccagaatggg
cagtgtgcagactccactcctgtggatgtcagagtgatgaagaaacgtgctcacatcctc
tatgagatgttggctggctgtgttcagaggaaggattacacagcattaaccaagttcctg
ccccccaaatacgagtacgtgctcgaggtgaggatgaccccaatccagtgcaagttgtac
cagtattacctggatcatttgacaggtgtaggtggtggcaatgaagggggaagaggcaaa
gctggagctaaactattccaggatttccagatgttgagcagaatctggactcacccttgg
tgtttgcagctggactatattagcaaagaaaataagggctattttgatgaagacagcatg
gatgacttcatagcttcagattccgatgaaacttccatgagcttaagttctgatgattat
gcaaagaaaaaaaaatccaaggggaagaaggtgacaaaagagtgtagctcaagtggaagt
ggcagtgataacgatgttgaagtcattaaagtctggaattcaagatcacgtggaggtggg
gaaggaaatgtagaagatcttacaaacaacccagcatcaacaaagtcagaggaaggcaaa
gctacatcctcttccaatcctggtagcccagctccagactggtacaaagattttgtcact
gatgcagatgctgaggtgttggaacattctgggaaaatggtgctgctcttcgaaattctt
cgaatggcagaggagctgggagacaaagttctagtgttcagccagtccctaatatctctg
gatttgatagaagatttcctggagctggctaacagggagaaatctgaaagagatcagcct
cctatctacaaaggtgaaggaaaatggttcagaaatattgactattatcgtttggatggc
tcaaccacagctcaatccagaaagaaatgggctgaggagtttaatgatgaaactaatgtg
agaggccgcttgtttataatatccactaaagcaggttccctgggaataaacctggtggct
gctaacagagtcatcatctttgatgcctcctggaacccctcctatgacatccagagcatc
ttcagggtttatcgctttgggcagaacaagcctgtgtttgtctacaggtttttggctcag
ggaaccatggaggacaagatctacgaccggcaggtgacgaagcagtcgctgtccttcagg
gtggtggaccagcagcaggtggagcggcacttcaccatgaatgagctcaccgagctctac
accttcgagccagacctgctggacgaccccaactccgagaagaagaagaagagggacacc
cccatgctgccaaaagacacgatcctggcagaactgctccagatcaacaaggagtacata
gttgggtaccacgaacatgattcactcctggaccataaggaggaagaggagctcactgaa
gaagagagaaaggcagcctgggcagaatatgaggcagaaaagaagggcatgaccatgcgt
ttcaacatgcccgcagggaccaacacaatgcccacaaatttcagctctcagacatatatt
ccttacaatttgggtgctctgtcagcaatgagtaaccaacagctggaggacctcattaat
caaggaagagagaaggtagtggaagcaaccaacagtgtggcagcagcaagaatccagcct
cttgaagacatcatttcagccatatggaaagaaaacttaaccctgacggagagccaggtg
caggccctggccctgaacagacaggcgagccaggagctggatgtgaagcgccgagaagcc
atttacaacgacgtccttgggaaacagcagatgttaatcggttgtgtccagaggatcctg
atgaacaggcggctccagcaccagtacaaccagcagcagcagcagcagatgtcctaccag
caagcagccatgggccacctcatgatgccaaagcctccaaatttaattatgaatccttcc
agctacccagccatagatgtgagaggaatgtatcagtcagtgtctggtgggatgcagcca
ccccccctacaacgagcaccacccccaatgagaggcaaaaatgcagggccttcccaaggg
aaatcaatgtga
DBGET
integrated database retrieval system
