Taeniopygia guttata (zebra finch): 100229418
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Entry
100229418 CDS
T01082
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100229418 (SOX21)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100229418 (SOX21)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
TGF_beta_GS
Motif
Other DBs
NCBI-GeneID:
100229418
NCBI-ProteinID:
XP_002196901
Ensembl:
ENSTGUG00000011206
UniProt:
H0ZLS6
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All DBs
Position
1:complement(73558062..73561754)
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AA seq
281 aa
AA seq
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MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADHEHPHGLKAGGLHAG
AAGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAASSPYSLLDLGSKMA
EISSSSSSSGSGLPYASSLGYPGAGGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYM
IPCNCSAWPGPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggatcacgtcaagaggccgatgaacgccttcatggtgtggtcgcgg
gcgcagcgacgaaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgcctgggcgctgagtggaagctgctgaccgagtcggagaagcggcccttcatcgacgag
gccaagcggctgcgggccatgcacatgaaggagcaccccgactacaagtaccggccgcgg
cggaagcccaagacgctgctcaagaaggacaagtttgccttccccgtgccctacgggctg
ggcggcgtggcggaccacgagcacccgcacgggctgaaggcgggcgggctgcatgccggc
gcggccggcgggctggtgcccgagtcgctcctggccaaccccgagaaggcggcagccgcc
gccgccgctgccgccgctcgcgtcttcttcccccagtcggccgccgccgctgccgccgcc
gccgccgcggccgccgccagcagcccctattccctgctggacctgggctccaaaatggcc
gagatctcatcctcctcctcttcctcgggctccggattgccctatgcctcctcgctgggc
tatcccggcgccggcggggcgggcgccttccatggggccgccgctgctgccgccgccgcc
gcggccgccgccggggggcacacgcactcgcacccgtcgcccggtaacccgggctacatg
atcccctgcaactgcagcgcctggcccggcccggggctgcagccgccgctggcctacatc
ctcctgccgggcatgggcaagccccagctggacccttatcccgcagcctacgccgcggcc
ctatga
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