Taeniopygia guttata (zebra finch): 100229420
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Entry
100229420 CDS
T01082
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100229420
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100229420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
NBCH_WD40
HIRA_B
WDR90_beta-prop_4th
WD40_like
Motif
Other DBs
NCBI-GeneID:
100229420
NCBI-ProteinID:
XP_030141913
Ensembl:
ENSTGUG00000008538
LinkDB
All DBs
Position
15:complement(6043680..6076004)
Genome browser
AA seq
1026 aa
AA seq
DB search
MKLLKPTWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMAPVLKEEDEKNENIP
KMLCQMDNHLACVNCVRWSNNGVYLASGGDDKLIMVWKRAAYIGPSTVFGSSSKLTNVEQ
WRCVSILRSHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLKGHSGLVKGL
TWDPVGKYIASQADDRSLKVWRTMDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSTKSSCPYCCC
AVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLDFSQD
ELGDPLSEEEKSNIHQSTYGKSLAIMTEAQLSTTIIENPEMLKYQQRQQQQGDQKNASIR
ECSGNATAPKVASMVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSTAF
FNSIPISGTLSGSMMSSQSNQQLMSLDSNAANSLNTSKPSVEPTAASIKPTDDAANKDGV
NATSASAAPSASSSSVLTTPSKIEPMKAFDSRFTERSKATSGTAVVSNTNQAVVDRLFFY
RLKDQNLIKDNKPKDILESSSDSEEKIPAVKPLSVPKRKLELEGETVEKKKKGRPRKDSR
LVPVTLTVQSPATLASEKDAACISAPALALKLPTPIPQKSFTLQISSDPSMYLEVENEMT
TVGGSKLSRLKCNREGKEWETVLTSRILTAAGSCEIVTVACEKRTLSVFSACGRRLLPPI
VLNTPISTLHCTGSCIMALTTAATLSVWDVHKQTAIVRDESLQTIFSGSDATVSQILLTQ
HGIPVMSMSDGKAYCFNPSLSTWNLVSDKQDSLAQCADFRSSLPSQEAMLCSGPLAVIQG
RTSNSGRQAARLFSMPHLVQQETTLAYLENQIAAALMLQSSHEYHHWLLIYARYLVNEGF
EYRLRELCKDLLGPVHYSAGSQWESTVMGLRKRELLKELLPVIGQNLRFQRLFTEYQEQL
DILRDK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaagccgacctgggtcaaccacaatggaaagccaatattttcagtggac
attcacccagatgggaccaagtttgcaacaggaggacaaggtcaggattctggtaaagtt
gtgatctggaatatggctcctgtcctgaaagaggaagatgaaaagaatgaaaatatcccc
aagatgctttgtcagatggacaatcacttagcttgtgtgaactgtgtgcgatggtcaaac
aatggagtgtacttggcttcggggggagacgacaagctgattatggtgtggaagcgagct
gcgtacattggacctagcactgtgtttggttctagtagcaaacttactaatgttgaacag
tggaggtgtgtgtcgattctcagaagccattcaggggatgtgatggatgtagcgtggtct
ccgcatgatgcctggctggcatcctgtagtgttgataacactgttgtcatctggaatgct
gtcaaattcccagaaattcttgccactttgaaggggcattctggcttggtgaaagggctg
acctgggatcctgttggaaaatacattgcctctcaggctgatgatcgaagtttaaaggtg
tggcggaccatggactggcagctggaaaccagcatcacaaaaccctttgatgagtgtgga
gggacaactcatgtgttgcgccttagctggtcgcctgatggtcactatcttgtttctgct
catgctatgaataattctggacccactgctcagatcattgagagggatggatggaaaacc
aacatggattttgtagggcaccggaaggcagttacagtagtgaaattcaatccaaaaatc
ttcaaaaagaaacaaaagaatgggagctccaccaagtcaagttgtccctactgctgttgt
gctgtcggtagcaaagatcgatctctttctgtctggctcacgtgtctgaagcgaccttta
gttgtcatacatgagctgtttgacaagtcaatcatggacatctcctggacccttaatgga
cttggtatcctggtgtgttccatggatggatcagtggcatttttggacttttcccaggat
gaacttggggatccactcagcgaggaggaaaagagcaacattcaccagtccacctatggc
aaaagcctggctatcatgactgaagctcagttgtccaccaccattattgagaatccagag
atgctgaagtaccagcagagacagcagcagcagggggatcagaagaatgcctcaattcgg
gaatgctctggcaatgccacagctcccaaagtggcaagcatggttaatggggagagtctg
gaggacatcagaaagaatctcttaaaaaaacaagttgaaacaagaacagcagatggtagg
agaaggatcacacctctctgcatagctcaactggacactggggatttttctacagcattt
ttcaatagcatcccaatatctggaactctgtctggctcaatgatgtcttctcaaagtaac
cagcagctcatgtcactagattctaatgcagcaaattcccttaatacttcaaagccttct
gtagagccaacagcagccagtataaaaccaacagatgatgcagccaataaagatggtgta
aatgctacctctgcctcagctgctccttctgcatcatcttcctctgtgttgacaactcca
tccaagattgagcctatgaaagcatttgattctcgattcacagaacgatccaaagccacc
tcagggactgctgttgtatcaaacacaaatcaggctgttgtggacagactttttttttac
agactgaaggatcagaatttaattaaagacaataagcccaaggatattctggagagcagc
agtgacagtgaagagaagattccagctgttaaaccactcagcgtacccaaacggaaactg
gaacttgagggagaaacagtagaaaagaagaaaaaaggaaggcctcggaaagactccaga
cttgtaccagtaactttaactgttcagtccccagctacactggcctctgagaaggatgct
gcttgcatctctgcaccagcattagcacttaaactgccaaccccaatcccacagaaatcg
tttactttgcaaataagttcagatccatcaatgtaccttgaagtggagaatgaaatgacc
acagtggggggctcaaagctgagcaggttaaagtgtaatcgagagggaaaggaatgggag
acagtcctcaccagtcgaatcctcactgcagcaggaagctgtgagattgtaactgtggcc
tgtgagaaacgaacattgtcagtattttcagcttgtggtcgtcgcctccttcctcctata
gtattgaatacacccatttccaccctgcattgcacaggttcctgcatcatggctctcacc
actgctgctacgctctctgtttgggatgttcacaagcagacagccattgttagagatgag
tctttgcaaacaatattttcaggaagtgatgcaacggtctctcagatcttgctgacccag
catggaattcctgtcatgagcatgtctgatgggaaggcatactgctttaatccttctctt
tctacatggaatcttgtttctgacaaacaggactctctagcacaatgtgcagacttcagg
agtagtttgccttctcaagaagccatgctgtgttctgggcccttggccgtgatacaggga
cgcacatcaaattcaggaaggcaagctgcaagattgttctccatgcctcatttagtgcaa
caagaaacaacacttgcatacctggagaaccagatagcagcagcacttatgttacaatcc
agtcacgaatatcaccactggctccttatctatgcacggtacctagttaatgaagggttt
gaatatcgtttgcgagaattatgcaaggatttactgggtccagtccattactcagctgga
agtcagtgggaatcaacagttatgggtttacgaaagagagaactattgaaagagcttctt
cctgttattggacagaacctccgcttccagaggcttttcacagagtatcaagagcagctg
gacatcttgagagacaagtag
DBGET
integrated database retrieval system