Taeniopygia guttata (zebra finch): 100229522
Help
Entry
100229522 CDS
T01082
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100229522 (SORCS3)
Membrane trafficking [BR:
tgu04131
]
Endocytosis
Others
Others
100229522 (SORCS3)
Endosome - Lysosome transport
100229522 (SORCS3)
Endosome - Golgi transport
100229522 (SORCS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
100229522
NCBI-ProteinID:
XP_030132227
Ensembl:
ENSTGUG00000010448
LinkDB
All DBs
Position
6:23537021..23803564
Genome browser
AA seq
1228 aa
AA seq
DB search
MEKGTNCFPTCHTIFLAWTWFLLLSWCCTGAEITCRSCSSPSPSWPSSSSRLRQEQRQPP
PPPPRGLRSWPGGRARGSVGAAAAAEPVPVPGAEPVPGAEPVPGAEPGGQAGPRGAALRA
AGAGGGAPGSRGPAAPRTRRSTEGRRALPAGGGRGVPAAEGQRGGRAQPRGPPEDARAAR
PRGAEEPRLSSTTFALTGDAAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRST
DYGTTYEKLNDKVGLKTVLSYLYVSPTNKRKIMLLSDPEIESSILISSDEGATYQKYRLN
FYIQSLLFHPKQEEWILAYSLDQKLYSSMDFGRKWQLMHERVTPNRFYWSVTGLDKEPDL
VHMEARTADGHTHYLTCRIQECSETKRSGPFPRSIDVSSLVVQDEYIFIQVTTGGRATYY
VSYRREPFAQIKLPKYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLA
LENVKSSRGLEGNIVIDLYEVAGIKGIFLANRKVDDQIKTFITYNKGRDWRLLQAPDTDL
RGDPVLCQLPFCSLHLRLQLSENPYTSGSISSKETAPGLLVATGNIGSELSYTDVGVFIS
SDGGNSWRQIFEEEYNVWFLDWGGALVAMKHTSVPIRHMWVSFDEGRSWTKYSFTSTPLF
VDGSLVDPGIETQIMTVFGHFSLRSEWQLVKVDYKSLFSHRCTKDDYQTWHLHNQGEPCV
MGERKIYKKRKPGAQCSLSRDYSQTVVSEPCVCGQGDFECDYGYERHSNNQCIPAFWFSP
SSLSKDCNVGQNYWNSTGYRRIVSNNCTDGLREKYMAKMEKCPGKAPRGLHILTSDGKLV
MEQGHNATFIILMEEGDLQRTNIQLDFGDGIAVSYANFSPVEDGIRHVYKSAGIFQVTAY
AENSLGSDTAVLFLHVVCPVEHVHLSVPFVAIRNKDVNITAVVWPSQAGTLTYFWWFGNS
TKPLITLESSISYMFTVEGMNTVTVQVAGGNTLIQDTKEVAVHEYFQSQLLSFSPNLDYH
NPDIPEWRQDVGKVIKRALAQVTGIPDEQILVAVFPGLPTSAELFILPHKNTTERRKSSE
ADLEQVVEILFNALNQNLVQFELKPGVEVVVYVTQLTLAPLVDSSSGHSSSAMLMLLSVV
FVGLAVFLIYKFKRKIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSEFTDPEELMDK
ELDTRVMGSISTIANSESTKEIPNCTSV
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggggaccaactgctttccgacctgccacaccatttttctcgcctggacatgg
ttcttacttctctcttggtgttgcaccggcgccgaaataacttgcagatcctgctcatct
ccatcgccctcctggccgtcctcctcgtctcgccttaggcaggagcagcgacagccgcca
ccgccgccgccgcgaggattacggagctggccgggcggccgagcgcggggctcggtcggg
gcggcggccgccgcggagccggtgccggtgccgggcgcggagccggtgccgggcgcggag
ccggtgccgggcgcggagccggggggccaagcggggccacggggagcggcgctccgcgcg
gcgggggcgggaggcggcgcgcccgggagccggggcccggcggcgccgcggacccgccgg
agcaccgaggggcgccgggcgctgccggccggcggcggccggggggtgcccgcggccgag
gggcagcgcggcggccgcgctcagccccgcgggcccccggaggacgcgagagcggcgcgg
ccgcgaggggccgaggagccgaggctgagcagcaccaccttcgcgctcaccggggatgcg
gcgcacaaccaagccatggtgcactggtccggacacaacagcagcgtgattctcattctg
acaaagctctacgacttcaacctggggagtgtcacagagagctcactgtggaggtcaaca
gactatggcactacctatgaaaagctaaatgacaaagtcggcctgaagactgtgctgagc
tacctatatgtcagtcccactaacaagaggaagatcatgcttcttagtgatccagagatt
gagagcagtatcctcatcagctctgatgaaggagctacctatcagaagtaccgtttgaat
ttctatatccagagtttgctcttccaccccaagcaggaggagtggatcttggcctacagt
ctggatcaaaagctgtacagctccatggactttggaagaaaatggcagctcatgcacgag
cgggtcaccccaaacaggttttactggtcagtgactggtttggataaagaacctgacctt
gtgcacatggaagcccggacagctgatggacacacccactatttgacctgtcggatccag
gagtgctccgagaccaagaggagcgggccctttccgcgctccatcgacgtcagctccctg
gttgttcaggatgaatacatcttcatccaggtgacaactgggggaagagcaacttactat
gtgtcatacagacgggagccttttgcacagatcaaattacccaaatactcccttcctaag
gacatgcatattatcagcacagacgagaatcaggtctttgcagctgttcaagagtggaac
cagaatgacacctataacctgtacatctcggacacccgaggggtctacttcaccctggcc
ttggaaaatgtgaaaagcagccgaggacttgaggggaatattgtcattgacctttatgag
gtagcagggatcaaaggcatattcctggctaacaggaaggtggatgaccagatcaagact
ttcattacctacaacaagggcagagactggcgtttgctgcaggcaccagacactgatcta
agaggggatcctgtactttgccagctgcccttttgctcattgcacttgcgcctgcagctc
tcggagaatccttatacttcagggagcatttccagcaaagagacagctcctgggctgctg
gtggccacaggcaatattggctctgaactttcctacacggatgttggtgtgttcatctct
tctgatggtggaaattcctggagacagatctttgaggaggaatacaacgtttggtttctg
gactggggcggggcactagtggccatgaaacacacgtcagtgcccatccggcacatgtgg
gtgagttttgatgagggaagatcctggactaaatacagtttcacatcaacaccacttttt
gtggatggatcccttgtagaccctggcatagagacccagataatgacagtttttgggcac
ttcagtctccgttctgagtggcagctggtcaaggtggactacaagtctctcttcagccac
aggtgtaccaaggacgactaccaaacctggcatctgcacaatcagggggagccttgtgtc
atgggggagaggaagatctataaaaaacgcaagcctggagcccagtgttccctaagtcgg
gactattcccaaactgtggtgtctgaaccatgtgtctgtggccaaggagactttgagtgt
gactatggatatgagaggcacagcaacaaccagtgcatcccagccttctggttcagccca
tcctccctgtccaaggattgcaatgttggtcagaactactggaacagcactgggtaccgc
aggattgtgtccaacaactgcacagatggcttgagagagaagtacatggccaagatggag
aaatgccctggaaaagcacctcggggattgcacatcctcacctccgatgggaagctggtc
atggagcaggggcacaacgccaccttcatcatcctcatggaagagggtgatctccaaagg
acaaacatccagcttgattttggagatggcattgcagtgtcctatgccaatttcagccct
gtggaggatggcatccgacacgtgtataagagtgctggaatcttccaggtgacggcgtat
gcagagaacagcctgggctcagacactgctgtcctgttcctgcatgtggtctgtccagtg
gagcacgtccatctgagtgtcccctttgttgccatcagaaataaggatgtcaacattact
gcagtggtttggcccagccaggcaggcacacttacctacttctggtggtttggcaacagc
accaagcccctcatcaccttggagagcagcatctcgtacatgttcactgtggaggggatg
aacactgtcaccgtgcaggttgctgggggcaacaccctcatccaggacaccaaggaggtc
gcagtgcatgagtatttccaatctcagctcctgtcattttctcccaatttggactaccat
aaccctgacatccctgaatggagacaagatgttggcaaagtcatcaagagagcactagca
caggtgactggtattcctgacgaacagatcctggtagctgtgttccctgggctgcctact
tctgctgaactcttcatactgccccacaaaaacacaacagagaggaggaaaagcagtgag
gctgatctggagcaagtggtagaaatcctttttaatgctctcaaccagaacctggtccag
tttgaactgaagcctggagttgaagtggttgtgtatgttactcagttaacattagcaccc
cttgtggattccagctcgggtcacagcagttcagcaatgctgatgttgttgtcagtggtg
tttgtgggcttggctgtttttttaatctacaaattcaagaggaaaatcccttggattaac
atctatgcccaagttcaacatgacaaggagcaggaaatgattggctctgtcagccaaagt
gaaaatgcccccaaaatcaccctgagtgagttcacagaccctgaggagctgatggacaaa
gagctggacacacgagtgatgggaagcatctcaacaattgccaacagtgaaagcacaaag
gaaatccccaactgcactagtgtttaa
DBGET
integrated database retrieval system
