Taeniopygia guttata (zebra finch): 100229582
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Entry
100229582 CDS
T01082
Symbol
VTI1B
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100229582 (VTI1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100229582 (VTI1B)
Membrane trafficking [BR:
tgu04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
100229582 (VTI1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
WXG100
Snapin_Pallidin
Fusion_gly
DUF4407
DUF3958
RSS_P20
Motif
Other DBs
NCBI-GeneID:
100229582
NCBI-ProteinID:
XP_030130357
Ensembl:
ENSTGUG00000011519
LinkDB
All DBs
Position
5:complement(29471241..29483526)
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AA seq
232 aa
AA seq
DB search
MAGRGAASSEHLERLHEIFRGLHGDLRGVPERLRGSAAEEKKKLVREFDEKQREANETLR
EMEEELKYAPMPFRNQMMSKIRAYRRDLSMFQREMRSTDLGLGRGNQGDTKYGIFATENE
QSTNLQSQRVLLLQGTDSLNRASESIERSHRIAAETDQIGTDIIEELGEQREQLERTKSR
LVNTSENLSKSRKILRSMSRRITTNKLLLSIIIILELAILGGVVYFKFFRKK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcggggccgcgtcctcggagcacctggagcggctgcacgaaatcttccgc
gggctgcacggagacctgcggggcgtccccgagcggctgcggggcagtgcggccgaggag
aagaaaaaactggttcgagaattcgatgagaagcagcgtgaagccaatgagacgctgcgg
gaaatggaggaagaactgaagtacgctcctatgcctttccgcaaccaaatgatgagcaaa
atccgagcctacagaagagatctgtccatgttccagagggagatgagaagcacagatttg
ggattgggccgtggaaaccaaggcgatacgaaatatggaatctttgccacagaaaatgaa
cagagtactaacctgcagtcacagagggtgctgcttctccagggcacagacagtctgaac
cgagccagtgagagcatcgagcgctcgcaccgaatcgcggccgaaaccgatcagattggc
acggatatcatcgaggaactcggggagcagcgggagcagctggaacgcaccaagagcagg
ttggtgaatacaagtgagaacttgagcaagagtcgcaagattctacgctcgatgtctcgg
agaataaccacaaataagttgctgctgtcaattatcatcatcctggaactggccatcttg
ggaggtgtggtctacttcaagttctttcgcaagaaatga
DBGET
integrated database retrieval system
