Taeniopygia guttata (zebra finch): 100229766
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Entry
100229766 CDS
T01082
Name
(RefSeq) LOW QUALITY PROTEIN: SNW domain-containing protein 1-like
KO
K06063
SNW domain-containing protein 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03040
Spliceosome
tgu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100229766
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100229766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100229766
Spliceosome [BR:
tgu03041
]
Complex B
Other components
Prp19-related factors
100229766
Complex C
100229766
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
SIR4_SID
Motif
Other DBs
NCBI-GeneID:
100229766
NCBI-ProteinID:
XP_032606191
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All DBs
Position
10:1874644..1876310
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AA seq
539 aa
AA seq
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MALSSFLPAPTQLSPDQLELEERPRAQRSRQSALASSQREPXPYGDWKGWIPQLMLEDFG
DGGAFPEIHVAQYPLDIGQKKKISNALALQVDAEGEIKYDAIARQGQSKDKVIYTKYTDL
VPKEVMNVGDPELQRPDDKAIREVTKKTRAALEKLVSQKVAAAMPVRAADEPALAQYIRY
TPSQQGAAFNSGARQRVIRVVEMQKDPMELPRFKINKKIPRGPPSPPAPVMHSPSRKMTV
REQQEWKIRPCISNWKNAKGYTVPLEKRLAADGRGLQAVHINENFAKLAEVLYIADRKAR
EAVEMRAQLERKMAQKEKEKHEEKLREMAQKARERRAGIKTQVEKEDGAARERDEIRRDW
RKERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNHRPSNEIQYDQRLFNQSKGMD
SGFAGGDDEIYNVYDQPWRSGKDMAQNIYRPSKNMDNDMYGDDLEAQITISRFAPDKEFS
NSDRNTGGRGRDGPVQFEEDPFGLDKFLEEAKQHGGSKQPSGSSGPKEHEHQSKKRRKD
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggccctcagcagctttttgccagctccaacccagctgtccccagatcagctggaacta
gaagaaagaccaagagctcagagatccaggcagagtgctctggcctcctcacaaagggaa
cctnccccatatggtgactggaagggatggataccacagttgatgctagaggattttgga
gatgggggtgccttcccagaaattcacgtggcccaatatccattggatataggccaaaag
aagaaaatttccaatgctttggctcttcaggtggatgcagaaggagaaataaaatatgat
gcaattgctcgacaaggacagtcaaaggacaaggttatttacacaaagtacacagatctt
gtgccaaaagaagtcatgaatgtgggtgatcctgaactgcaaagaccagatgacaaggca
attagagaggtaacaaagaagacaagagcagccttggagaaattagtctcccaaaaagtt
gcagcagccatgccagttcgagctgctgacgagccagctctggcacagtacattcggtac
acaccatctcagcaaggagctgcattcaactctggagcaaggcagagagttattcgggta
gtggaaatgcagaaggaccctatggagcttccaagattcaaaatcaacaagaagattcca
cgaggaccaccatctcctccagcacctgtaatgcactctccgagtagaaagatgactgtg
agagagcagcaagagtggaaaattcgtccatgcatttcaaactggaagaacgcaaagggt
tacaccgttcccttggagaagcgtctggctgcagatggcagaggattgcaggctgttcat
attaatgaaaactttgccaaacttgctgaggtgctctatattgctgacagaaaggctcgt
gaggcagtagagatgcgtgcccagttggagaggaaaatggctcagaaagaaaaggagaaa
cacgaggaaaagctccgagaaatggctcagaaagccagggagagaagagcagggatcaaa
acacaggttgaaaaagaggatggagcagctagagaaagggatgaaatcagacgtgactgg
cgcaaagaaaggcagcatgacagaaatctttcccgggcagctcctgataaaaggtcaaag
ctgcaaaggaatgagaacagagatatcagtgaagttattgccctgggggtacccaaccac
aggccatccaatgaaatccaatatgaccagaggctgttcaaccagagcaagggtatggac
agtggctttgctggtggagacgatgaaatttataatgtttatgaccagccatggagaagt
ggcaaggatatggcccagaacatctacaggccaagtaaaaatatggataacgacatgtat
ggtgatgatctagaggctcaaataacgatcagcaggtttgctcctgacaaagagttttct
aactcagatcgtaacaccggaggcaggggcagagatggaccagttcaatttgaggaggat
ccatttggtttggacaagtttctggaagaagccaagcaacacggtggttctaaacagcca
tcaggcagcagcggccctaaggaacatgagcatcagagcaaaaagaggaggaaggactga
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