Taeniopygia guttata (zebra finch): 100229862
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Entry
100229862 CDS
T01082
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04010
MAPK signaling pathway
tgu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100229862 (CACNA1H)
04020 Calcium signaling pathway
100229862 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tgu04040
]
100229862 (CACNA1H)
Ion channels [BR:
tgu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100229862 (CACNA1H)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
100229862
NCBI-ProteinID:
XP_030140504
LinkDB
All DBs
Position
14:complement(6300327..6458535)
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AA seq
2406 aa
AA seq
DB search
MSAGESREPPRPAEVRVPITALPVPRRPAEQPPEDAGSGSGSGSGSGSGSGSGSGSGSSS
GSPGREPPAELGSEEEEQVPYPALAPTAFFCLKQTTRPRSWCLRLVCNPWFEHVSMLVIL
LNCVTLGMFQPCEDVECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCYLGDTW
NRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLG
NVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDRNFAMTYNLTFLHPYYRPDEAEENPFIC
SSHRENGMQRCSNIPSRKESKVECTLSMESYSPSLASPEPSRNSCINWNQYYNICMAGDI
NPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMIN
LCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVK
RRTIRLYNNWQSKRRKKVNPNSGGGSGGQSQRGRRRITSIHHLIHHHHHHHHHYHISNGS
PRGPRANPEICELELQVMKPGRQLTLPPPASPRPPGPAGAVHSIYHADCHVEGPPGTCRA
TSSPVGSKGAGLGGHGSMNYPTILPSPGGKGGPAALAKGKRNGSSPVAAGNSPGNLGLDS
YGKLQQLVGEHALRRTPSRLSGLSAAGALPSAGGPGLSCDLQDCPFCASLLDDPEFALSD
SDSNGDSDSNGVYEFTQDLRHGDHRDQLQQQRGRRRRKKKKAKERNKVVKLWKAFGTKLK
RIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAF
GIFGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVV
LMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTV
FQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRS
DTDDDKTSANFEDEFEKLKDLRATEMKMYSLAVTPNGHLEGRGAMPPPIIMRTAATPMPT
PKCSPHLDSLHGLGDSRRGSNASLDPAGYDQKSLSSLRSSPCANWATSSTWGSRRSSWNS
LGRAPSLKKKNQSGERESLLSGEGKGSTDDDSDDAKSSTLSRPSPPRRAESLERRGSQEL
PELLRVPSVRQLGLGPAALLPAEFRGCNGKTGHGPAEFFLRVDGHKEDALDYEDDVEDSY
CYRIRKALEPYKPQWCKTHEDWSLYLFSPQNRFRVMCQKVIAHKMFDHVVLVFIFLNCIT
IALERPDIDPLSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGV
LVFVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPI
GNIVLICCAFFIIFGILGVQLFKGKFYYCDGPDVKNITTKADCTNAHYKWVRRKYNFDNL
GQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFFVLNMF
VGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKEMYLSEAQRRPYYADYSPARRY
IHSLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEALLKLV
AFGFRRFFKDRWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLL
KMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHA
TFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQF
VLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGSGGSRSAAVAAESRALHGNPEH
AKGKQQALGAAASLRAQDSQNLLTVRKISVSRMHSLPNDSYMFRPVTPATAPLPLHEVEM
ETYPCKAQRGSITSIRSQPVAGSSSLRVPSEALPAAARCPGHEGRHRWKGLAPHGTPRSP
ALSKLLCRQEAVQTDSADRQTPERKDSLPAEPGEPQPPAKQPQSTLTPSPLHSPLPATPP
HSPPSSPHRPLGALARKHTCGQHGVPSRPPSPTSPPGPEGCQGEPSDLADEEVRHINSSA
KDWAGEHSDPGSRSTSPFASPAPSPVPLKNCSTSSLSRKEKDLKKFYSTDSKGFLSKPSW
ADEQRRHSIEICPSGCAFQEPAEDKQRPPGHVQPEADHIHGARRKKKMSPPCISIDPPME
DDGAAAPRSKASENTLLRRRTPSCEFPTYRESLELPESRGEHLSIPNFSFEQLDGGSLSS
LSELLDSGQSTPASVDSRPDAELKKQEHFKTERGKELLGTAAKSPLRKQDLGPVTAATEE
GTDDPV
NT seq
7221 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccggcgagagccgagagccgccgcgcccggccgaggtgcgggtgcccatcacg
gcgctgccggttccgcgccgccccgccgagcagccgcccgaggatgccggcagcggctcc
ggcagcggctccggcagcggctccggcagcggctccggcagcggctccggctccagcagc
ggctcccccggccgagagccgcccgccgagctgggctccgaggaggaggagcaggtgcct
tacccggcgctggcacccaccgccttcttctgcctcaagcaaaccacccgcccgcgcagc
tggtgcctcaggctggtctgtaacccctggttcgagcacgtcagcatgctggtgatcctg
ctcaactgtgtcaccctgggcatgttccagccctgcgaggacgtggagtgccagtcggag
cgctgcaccatcctggaggcatttgatgacttcatttttgccttctttgccgtggaaatg
gtcatcaagatggtggccctgggcatcttcgggcagaagtgttaccttggagacacctgg
aatcgcctggacttcttcatcgtcatggcagggatgatggaatattccctggatggacac
aacgtcagcctctccgccatccgcaccgtgcgcgtcctgcgcccgctgcgcgccatcaac
agggtcccaagcatgaggatcctggtcacactgctgctggacactctgcctatgttaggc
aacgtcctcctcctctgcttcttcgtcttcttcatctttgggattgtcggggtccagctc
tgggcagggctgctgaggaacaggtgcttcctagacaggaattttgccatgacgtacaac
ctgaccttccttcacccctactaccggccggacgaggcggaggagaaccccttcatctgc
tcctcgcaccgggagaacgggatgcagaggtgctccaacattcccagcaggaaggagtcc
aaggtggagtgcaccctgagcatggagtcctacagccccagcctggccagccccgagccc
agcaggaactcctgcatcaactggaaccagtactacaacatctgcatggccggggacatc
aacccccacaacggggccatcaattttgataatattggatatgcctggattgctattttt
caggtgataactctggaaggatgggtggacatcatgtattatgtgatggatgcacactct
ttttacaattttatatattttatattgcttatcatagttggctctttcttcatgatcaac
ctgtgcctggtggtgatcgccacccaattttcggagaccaagcagcgggagaaccagctg
atgcaggagcagcgggcgcgctacctgtccaacgacagcaccatcgccagcttctcggag
ccgggcagctgctacgaggagctgctcaagtacatctgccacatcttcaggaaggtgaag
agaaggaccatccgcctctacaacaactggcagagcaaacgccgcaaaaaagtcaacccc
aacagcggcggcggcagtggcgggcagagccagcgtggcaggaggagaatcacctccatc
caccacctgatccaccaccaccaccaccaccaccaccactaccacatcagcaacgggagc
ccgcgggggcctcgcgccaaccccgagatctgcgagctggagctgcaggtgatgaagcca
ggccggcagctgacgctgccgccgcccgcctcgcccaggccgccgggccccgccggggcc
gtgcacagcatctaccacgccgactgccacgtggagggacctcccggcacctgcagggcc
accagcagcccggtgggcagcaaaggggccgggctgggtggtcacggcagcatgaactac
cccaccatcctgccctcccccggcggcaagggcggcccggcagcgctggccaaagggaag
aggaacgggagctctccggtggccgcggggaacagcccagggaacctgggcctggattcc
tacgggaagctgcagcagctggtgggagagcacgctctccgccggacgcccagccggctg
tcggggctgagcgcggccggggctctgcccagcgctggtggccccgggctgagctgtgat
ctgcaggactgtcccttctgcgccagcctcctggacgaccccgagttcgccctcagcgac
tccgacagcaacggcgactccgacagcaacggcgtctacgagttcacgcaggacctgcgc
catggggaccaccgggaccagctgcagcagcagcggggcaggaggaggaggaagaagaag
aaagccaaggagaggaacaaggtggtgaagctctggaaggcgttcggcaccaaactcaag
aggatcgtggagagcaaatacttcaaccgcgggatcatgatcgccatcctcatcaacacc
ctcagcatgggcatcgagtaccacgagcagccagacgagctgaccaacgccttggagatc
agcaacatcgtcttcaccagcatgtttgccctggagatgctcctgaaactcctggccttt
ggcatctttggctacatcaagaacccctacaacatcttcgacgggatcatcgtggtgatc
agtgtctgggagatcatcgggcagtcggacgggggcctgtccgtgctcaggaccttccgg
ctgctccgcgtgctgaagctcgtgcgcttcatgcccgccctgcgccgccagctcgtggtg
ctcatgaagaccatggacaacgtggccaccttctgcatgctgctcatgctcttcatcttc
atcttcagcatccttggcatgcatctttttgggtgcaagttcagcctgaaaactgacacc
ggagacaccgttccagacaggaagaattttgattccttactttgggccattgtgaccgtg
ttccagatcctgacgcaggaggactggaacgtggtgctctacaatgggatggcctccacc
tcctcctgggccgccctctacttcgtggccctgatgacctttggcaactacgtcctcttc
aacctcctggtggccatcctggtggaaggattccaggcagagggagatgccaacaggtca
gacacagatgatgacaagacatctgccaatttcgaggatgagtttgagaagctgaaagac
ctcagagcaacagagatgaagatgtactcgctggctgtcacccccaacgggcacctggag
ggcaggggggccatgcccccgcccatcatcatgcgcacggcggccaccccgatgcccacc
cccaagtgctccccacacctggactccctgcacggcctcggggactcgaggagaggcagc
aacgcctcgctggaccccgcgggctacgaccagaagtccttgtccagcctccgcagctcc
ccctgtgccaactgggccaccagcagcacctggggcagccgccgctccagctggaacagc
ctgggcagggcgcccagcctcaagaagaagaaccagtccggagaacgggaatcgctgctc
tccggagagggcaaaggcagcacggacgacgactcggacgacgccaagtccagcacgctg
agccggccctcgccgccgcgccgggcggaatccctggagcgccgcggctcccaggagctg
cccgagctgctgcgggtgccctcggtgcgccagctcggcctcggccccgccgccctgctg
cccgccgagttccgcggctgcaacggcaagaccggccacggccccgccgagttcttcctc
agggtggacgggcacaaggaggatgcgctggactacgaggatgacgtggaggatagttat
tgctaccggatccgcaaagccctggagccctacaaaccccagtggtgcaagactcacgag
gactggtccctctacttgttctccccacagaacaggttccgagtgatgtgccagaaggtc
attgcccacaaaatgtttgaccacgtggtgctggtcttcatcttcctcaactgcatcacc
atagctctggagagaccagacatcgaccccctgagcacggaaaggatattcctaagtgtc
tctaattacatcttcactgccatctttgtggctgaaatgatggttaaggtggtagctctt
ggctttttctctggggagaacacgtacctgcagagcagctggaacgtcctggatggagtg
ctggtctttgtctccatcattgacatcattgtgtccatggcatcagcaggaggagccaaa
atcctgggagtccttcgtgtgttgaggctcctgcggaccctgcgacctctccgagtcatc
agcagagccccaggtctgaagctggtggtggaaaccttgatctcctccttgaggcctatt
gggaatattgttctcatctgctgtgctttcttcattatctttgggattttaggggtccag
ctttttaaaggcaagttctactactgtgatggccctgatgtcaaaaacatcaccacgaag
gctgactgcaccaacgctcactacaaatgggtccggaggaagtacaatttcgacaatttg
gggcaggccctgatgtccctgtttgtcctctcctccaaggacggctgggtgaacatcatg
tacgacgggctggacgccgtgggcattgaccaacagcccatccagaaccacaacccttgg
atgctgctctacttcatctccttcctgctcatcgtcagcttcttcgtgctcaacatgttc
gtgggggtggtggtggagaacttccacaagtgccggcagcaccaggaggcggaggaggcg
cggcgccgggaggagaagcggctgcgccgcctggagaaaaagcgcaggagtaaggagatg
tacctgtctgaagcccagcgcaggccctactacgccgactactcgccggccaggaggtac
atccacagcctgtgcaccagccactacctcgacctcttcatcaccttcatcatcggcgtc
aacgtcatcaccatgtccatggagcactacaaccagcccaagtccctggatgaagccctc
aagtactgcaactacgtgttcaccatcgtctttgtgttcgaggcactgctcaagttggtg
gcctttggtttccggaggttttttaaggacaggtggaaccagctggacttggccatagtc
ctgctgtccatcgtggggatcaccctggaggagatcgagatgaacgctgccctgcccatc
aaccccaccatcatccgcatcatgcgggtgctccgcatagccagagtgctgaaactgctg
aaaatggccacgggcatgagagctctgctggacacggtggtgcaagccctgccccaggta
gggaaccttggcctactttttatgctcctgttttttatctatgctgccctgggagtggaa
ttgtttggcaagctggattgcagtgaggagaatccctgtgaaggcctgagccgccacgcc
accttcaccaacttcggcatggccttcctcaccctcttcagggtgtccacaggggacaac
tggaacgggatcatgaaggacacactgcgggagtgcacgcgggaggacaagcactgcctc
agctacctgcctgtcatctcccccgtctacttcgtcaccttcgtcctcatcgcccagttc
gtgctggtcaacgtggtggtggcagtgctgatgaagcacctggaggagagcaacaaggag
gccaaggaggacgccgagatggacgctgagatcgagctggagatgtcgcgagggagcggc
gggagcaggagcgcggccgtggccgccgagagccgagcgctgcacgggaacccggagcac
gccaagggcaagcagcaagcactgggcgctgcagcctcgctgagggcccaggactcccag
aacctgctgacagtccggaagatctccgtgtcccgcatgcattccctgcccaacgacagc
tacatgttccggcccgtcacgccagccacggccccgctgcccctgcacgaggtggagatg
gaaacctacccctgcaaagcccaaagaggatccatcacctccatccgctcccagcccgtg
gctggcagctcctcgctgcgggtgccctcggaggcgctgccggcggccgcgcgctgcccc
ggccacgaagggcggcaccgctggaagggtctggccccccacggcaccccccgatctcct
gctctcagcaagctgctctgcagacaggaggccgttcagacggactcggcagacagacag
actccagagcgcaaagacagcctgccagcagaacctggagagccccagccaccagcaaag
cagccccagagcaccctcacccccagccctctccattccccgctcccagccacccctcca
cactctcccccatcctccccacaccggcccctcggcgccctggcacggaagcacacgtgt
ggccagcacggcgttcccagccggccacccagccccaccagcccccccggccccgagggc
tgccagggcgagccctcagacctggctgatgaggaggttcggcacatcaacagctcggcc
aaagactgggcaggggagcactcggaccccggcagccgctccacctcacccttcgcctcc
ccagccccgtcccccgtgcccctcaagaactgcagcacaagcagcctctcccgcaaggag
aaggacttgaagaagttctacagcaccgacagcaagggcttcctcagcaagcccagctgg
gccgacgagcagcggcggcactccatcgagatctgcccctcgggctgcgccttccaggag
cccgccgaggacaagcagcggccccctggccacgtccagccagaggccgaccacattcac
ggagcccggaggaagaagaagatgagcccgccctgcatttctatagatcctcccatggag
gacgacggagcagcggccccacgcagcaaagcctccgagaacaccttgctgcggaggaga
accccgtcctgcgagttcccgacctaccgagaatccctggagctcccggagagccgaggg
gagcacctcagcatccccaacttctccttcgagcagctggacggcggctccttgagcagc
ctctcggagctgctggacagcgggcagtccacgccggcctccgtggactcgcggccggac
gcggagctgaaaaagcaggagcacttcaaaactgagaggggcaaagagctgctgggcact
gctgccaagagccccctgcgcaagcaggacttgggccccgtgactgctgccacagaagaa
ggcacggatgaccccgtatag
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