Taeniopygia guttata (zebra finch): 100229928
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Entry
100229928 CDS
T01082
Symbol
RNF169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100229928 (RNF169)
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100229928 (RNF169)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
100229928 (RNF169)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
100229928 (RNF169)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
100229928 (RNF169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_4
Prok-RING_4
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100229928
NCBI-ProteinID:
XP_032602474
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All DBs
Position
1:18935737..18956448
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AA seq
654 aa
AA seq
DB search
MAAAGAGGRAVVRGRRRRGRPAAEEEQDAVVLSVAECPVCRQALVEAVTPPCRHSLCLAC
FQRCLQGPGLCCPLCRSRLSTRARRQQAELAATTAAGAAGGERRLPDQDFIFRAPIKLSK
AGELREEYESQLRKLREEKLQEEKTSEDLIHKFILDDMDVGKRKMEEQQKKDESVVLKGN
QDRFPERLSDSENEEPFQGKQTHRSAFVSKTSAYSFAFLSGNLTSKVKRSRSCNDTIQER
SKSRQRSAPAAKTKVLPGGGASTPLLGVLSCAQNNRCRSAPDLTADKRLLLSTVSSLSAL
HRPERSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLSRSLQK
PTTYEASPRTLKKWEQIFQERQIKKTLSKATLTSLASEPGEDIVVPDITNSSSCTKEQPQ
AQEDHLPPDTTGEPRPELDFFPSVSEMKLGRGSEKNRGSQALTTDDGAAELDVRSSVTSL
NTRVAEVPDLKVNAFMDKSCLSLGPKTLSRRLMGISASLPDNSTLAVPIKPPGKKQLKYL
NNSELINVENSTCNSVENIIGEQPPLLRRGRKRRCKTKHLEHNGSVKRLRHVAGEVGLPP
EVRDVEQKLQQEEEDRRLALHLQRIFDSENRTVDRRKIRLDRYLLRSKSTLGAK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggtgccggcggccgggccgtggtgcgggggcggcggcggcggggccgg
cccgcggccgaggaggagcaggacgcggtggtgctgtcggtggccgagtgcccggtgtgc
cggcaggcgctggtggaggcggtgacgccgccctgccgccactcgctctgcctcgcctgc
ttccagcgctgcctgcagggcccgggcctctgctgcccgctgtgccgcagccgcctctcc
acacgggcccggcggcagcaggccgagctcgcagccaccacggccgccggagcagcaggc
ggggagcggcggctgccggaccaagattttatattcagagcacccattaaattaagcaaa
gcaggagaactccgagaagaatatgaaagccagctaaggaagctgagagaagagaaacta
caagaagaaaagacatctgaggatctgattcacaagttcatcctagatgacatggatgta
gggaaaagaaaaatggaggaacagcagaaaaaagatgaatctgtagtgctgaaagggaac
caagaccgttttcctgaacgtctctcggattccgagaatgaagaaccattccagggcaag
caaacacatcggtcagcttttgtttccaagaccagtgcttactcctttgctttcctttca
gggaatttaacctccaaggtgaagaggagtcggagctgcaacgacaccattcaggagaga
tccaagagcaggcagagatcagccccagccgccaaaacaaaggtgctgcccggaggaggc
gcatcaacaccgctgctcggggtgctgtcgtgcgcgcagaacaaccgctgccggtccgcc
ccggacctgacggccgacaagcgcctgctcctcagcaccgtgtcctccctgtcggccctg
cacaggccggagcgctccatcagccccgagagcaacgacagcatctcagaggagctcaac
catttcaagccgatcgtctgctccccatgcaccccgccaaagaggcttcccgacggcaga
gtcctgagcccactcatcatcaaatccacccccagaaacctgagccggagcctgcagaag
ccaaccacctacgaggccagtcctagaacactgaaaaaatgggagcagatatttcaggag
cgtcagatcaaaaagactctctctaaagcaacccttacgtccttggcttcggagcctggg
gaagacattgtggttcctgacatcaccaactcaagcagttgtactaaagagcagccacaa
gcgcaggaggatcaccttccacctgacacaacaggagagcctcgccctgagctggatttc
ttcccgtcagtcagtgaaatgaagctgggaagggggagtgagaagaacaggggttcacag
gccttaaccactgatgacggtgctgctgaactagatgtgagatcaagtgtaacctcccta
aacacacgagtggctgaagtccctgacctaaaagtgaatgcattcatggacaaatcctgt
cttagtctgggcccaaaaacgctgagcaggagactcatgggcatcagcgcatcgctgcct
gacaacagcacgctcgcagtccccatcaagccaccggggaaaaagcagctgaaatacctg
aacaacagtgagctgatcaatgtagagaacagcacctgcaactccgtggagaacatcatc
ggggaacagccaccgctgctgcggcggggccggaagagacgctgcaaaacaaagcacttg
gagcacaacggctctgtcaaaagactgaggcatgtggcaggggaggtgggcctgcctccg
gaggttcgggacgtggagcagaagctccagcaagaggaggaggacaggaggttggccctg
cacctgcagcggattttcgacagtgagaacaggaccgtggataggcggaaaatccgtctg
gatcggtatctcctgcggtccaagagcactctgggtgccaagtag
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integrated database retrieval system
