Taeniopygia guttata (zebra finch): 100229956
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Entry
100229956 CDS
T01082
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100229956 (RBM39)
Spliceosome [BR:
tgu03041
]
Common components
Common spliceosomal components
General mRNP proteins
100229956 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
100229956
NCBI-ProteinID:
XP_002192236
Ensembl:
ENSTGUG00000003048
LinkDB
All DBs
Position
20:complement(116597..147396)
Genome browser
AA seq
522 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRERRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccatgaagaacgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagccatgacagaaagaggagcagaagtaaggaacgcaagcggagccgagat
cgggaacggaaaaagagcagaagccgggaaaggaaacggagcagaagcaaagaacgcaga
cgcagccggtctaggagtagagagcgcagattcagaggccgctatagaagtccttattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgccccacagcatcaaatta
agcagacgtcgctccagaagcaaaagtcctttcagaaaagacaaaagccctgttagagaa
cctattgataatcttacccctgaagagagggatgctcgaacagtgttctgcatgcagttg
gctgcaagaatccgaccgagagacctggaagaatttttctctacagtagggaaggttcga
gatgtgcgaatgatttcagatagaaattccagacgttcaaaggggattgcttatgttgaa
tttgttgatgttagttcagtgcccctggcaataggactgactggacagagagtcctgggt
gtacctatcatagtacaggcatcacaggcagagaaaaacagagcagcagcaatggcaaat
aatctgcagaagggcagtgctggtcctatgaggctctatgtgggatcattacacttcaat
ataactgaagatatgcttcgaggaatcttcgagccatttggcaggattgaaagtattcag
ctcatgatggacagtgaaactggacgctcaaaaggatatggattcattacgttctcagac
tctgagtgtgccaaaaaagccctggaacaactcaatggatttgagctggctgggaggcca
atgaaagtaggacatgtaactgagcgtactgatgcttccagtgctagctcatttttggac
agtgatgagttggaacggactggaattgatttggggacaactggtcgccttcagttgatg
gcaagacttgcagaaggtactggtttgcagattcctccagctgcacagcaggctctgcag
atgagtggatctttggcctttggagctgtgacagatttgcaaacaagactgtcccagcag
aatgaagttctggctgcagcggcttctgtacaaccacttgcaacacagtgcttccagctt
tctaacatgtttaatcctcaaactgaagaagaagctggctgggacacagaaattaaagat
gatgtgattgaggaatgtaacaaacatggaggagttatccacatctacgttgacaaaaac
tcagctcagggcaatgtgtatgtcaaatgtccctccatcgctgctgccattgcagctgtc
aatgctttgcatgggaggtggtttgcaggtaaaatgattacagcagcgtatgtacctctt
ccaacataccacagccttttcccagactctatgactgcaacccaactactggttcctgtt
cgacgatga
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