Taeniopygia guttata (zebra finch): 100230125
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Entry
100230125 CDS
T01082
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X20
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04010
MAPK signaling pathway
tgu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100230125 (CACNA1B)
04020 Calcium signaling pathway
100230125 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tgu04040
]
100230125 (CACNA1B)
Ion channels [BR:
tgu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100230125 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100230125
NCBI-ProteinID:
XP_030142635
Ensembl:
ENSTGUG00000002855
LinkDB
All DBs
Position
17:2060777..2372345
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AA seq
2320 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAAIKKSKNDLI
HAEEGEDHFTDICSVGSPFARASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWVVL
CVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCF
DFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSI
ISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQILTGEDWNAVM
YHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEAT
NQKLALQKAKEVAEVSPMSAANISIAAKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYN
ELDPEERVRYATTLHIRPDMKTHLDRPLVVEPRGEGRNNITKLSPVDVQEVVEHPKPTSA
DGAEAPRKHHRHREKEKLGEQEKGDVTKDESGEAGAGNKEERHRQHRSRSKEVEGGSKEG
KSDRNRGQEGGKRHHRRGSVEEGAEKEHRRHRSHRHSSDRPAKEGNGTANGARGERRSRH
RGGSRSGNRDGEPGAKGDNGEEPHRRHRLRNRALSTYESVEKDSGEKDGEAGGEKEHRNH
QPKENQCELEASGSGSGPGGVPVHTLPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTT
VNIPVTITAPPGETTVIPMNNVEFESKPEEKKDVDDLTKNGPKPILPYSSMFILSPTNPI
RRLFHYIVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMV
IKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPL
KTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELE
KDCRGQYLDYEKNEVEAQPREWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATY
EEQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERAC
IDFAISAKPLTRYMPQNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAY
EEMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIADTD
NFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ
VFGNIALDDETSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNRACDPLSGLTKK
ECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYD
PAACGRISYTDMYEMLRHMSPPLGLGKKCPARVAYKRLVRMNMPISPEDLTVHFTSTLMA
LIRTALEIKLASGGVKQHQCDAELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAA
LMIFDFYKQNKNSREQVQPPGGLCQPGPVSLFHPLKATLEQTQPAAFSNAKAFLRQKSSA
SLNNGGALPPPEGGIKESSSWGTQRTQDVFYETRSPAFERGHSEEIPIERVVEMKEISPT
VANGEPQPGLESQGRAASMPRLAAETQPIPDTSPMKRSVSTLAPQRPHAMHLYEYSLERM
PPEQGHHHHHHRCHRRKEKKQKSVDRAAHHLADGQAVAQSGESSSKDKKQERGRSQERKQ
HSSSSSEKQRFYSCDRYGSRDRAQPKSADQSRPTSPSGGPEHGPHRQGSGSVNGSPLLST
SGASTPCRGRRQLPQTPLTPRPSITYKTANSSPVHFTTFQTPTFSPGRLSRGLSEHNALL
RGEQQPPPPAVARIGSDPYLGHRDADSPQRAAPEDTLTFEEAVATNSGRSSRTSYVSSLT
SQSHQIRRVPNGYHYTLGLNTGPGARGRSYYHEADEDDWC
NT seq
6963 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtttggggatgatctgccaacccgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggcccccaagccggccaaaggatgtataaacagtcg
atggctcagagagccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatacgcc
aagcgaataacagagtggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggaacaacatttgccggatggagacaagacaccgatgtcagag
agattggatgacactgagccgtactttattggaatattttgttttgaagctggtatcaaa
atcatcgctctgggctttgtttttcacaaaggctcttacctgcgcaacggctggaatgtg
atggattttgtcgtggtcctcacagggattctggcgactgctgggactgactttgacctg
cggaccctgcgcgccgtgcgggtgctgcggcccctgaaactcgtctcggggatcccaagc
ctgcaggttgtcctcaagtccatcatgaaggccatggtgcccttgctgcagattggtctg
ctcctcttcttcgccatcgtgatgttcgccatcatcgggctggagttttacatgggcaag
ttccataaaacctgcttttccaacgagacaggtgaggaggtgggggattttccctgtgga
gaggagcctcctgccaggcagtgtgagagcgggaccacgtgcagggagtactggcagggc
cccaattatggcatcaccaactttgacaacatcctcttcgccgtgctcaccgtcttccag
tgcatcactatggagggctggaccgacatcctctacaacacaaacgacgctgcaggaaat
acctggaattggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcttatcaggtgaatttgccaaggagcgagagcgggtggagaaccgc
cgggcgttcctgaagctccgcaggcagcagcaaatcgagcgggagctcaacgggtacctg
gagtggatcttcaaagcagaggaggtgatgctggccgaggaggacaagaacgcggaagag
aagtcccctctggacgtgttgaaaagagccgcaataaagaagagcaaaaatgacctgatt
catgcagaagaaggtgaggaccatttcacagacatttgctccgttgggtctccctttgcc
cgcgccagtttgaagagtgggaagaacgagagctcgtcctacttcaggaggaaagagaag
atgttccgcttcttcatccgccgcatggtgaaggctcagagcttctactgggtcgtgctc
tgcgtggtggccctcaacaccctctgtgtggccatggtgcactatgaccagcccgagaag
ctgaccactgctctctatttcgcagaatttgttttcctggggctgttcctcaccgagatg
tctttgaagatgtatgggctggggccaaggaattacttccactcttcattcaactgcttt
gactttggggtgatcgtgggcagtatttttgaggtcatctgggctgcggtgaagccgggc
acctcctttggcatcagcgtcctgcgagccctgcggctgctgaggatcttcaaagtcacc
aagtactggaattccctgaggaatctggtggtctccttgctgaactccatgaaatctatc
atcagtttgcttttcctgctgttcctcttcatcgtggtctttgctctgctggggatgcag
ctcttcggagggcagttcaatttccaagatgaaactccaaccacgaattttgataccttc
cctgctgccatcctcacagtcttccagatcctgacgggggaggactggaatgctgtgatg
taccacgggatagagtcgcagggcggagtccactcgggaatgttctcctccatctacttc
atcgtcctcaccctcttcggtaactatactctcctgaacgtcttcttggccatcgctgtg
gacaacctggccaacgcccaggagctgaccaaggacgaggaggagatggaggaagccacc
aaccagaagctggccctgcagaaggccaaggaggtggccgaagtgagccccatgtcggcg
gccaacatctccatagcagccaagcagcagaattcctccaaatccaagtcggtttgggag
cagaggacgagccagatccggatgcacaatttccgagccagctgcgaggcgctgtacaac
gagctggaccccgaggagcgggtccggtacgccaccaccctgcacatccgacccgacatg
aaaacccacctggaccggccgctggtcgtggagccccgcggtgaaggcaggaacaacatc
accaagctgagccctgtggacgtccaggaggtggtggagcaccccaaacccacctccgct
gatggggcagaagcgccacggaagcaccacaggcatcgggagaaggagaaactgggagag
caggagaagggagacgtgaccaaggatgagagcggcgaagccggggccggcaacaaggag
gagcggcaccggcagcaccggagccgcagcaaggaggtggaagggggcagcaaggaaggg
aaaagcgaccgtaacagggggcaggaaggggggaagaggcaccaccggcggggctcggtg
gaggaaggggccgagaaggagcaccgcaggcaccgcagccaccggcactcgtccgaccgg
ccggccaaggagggcaatggcactgccaacggtgcccgcggcgagcggcgctcccggcac
cgcggagggtcccgctccgggaacagggatggagagcccggggccaagggggacaacgga
gaggagccccaccggcggcaccggctgaggaacagggccctgtccacctacgagtccgtg
gagaaggacagcggggagaaggatggggaggctggcggcgagaaggagcaccggaatcac
cagcccaaggagaaccagtgtgagctggaggccagtggcagtggcagtggccctgggggt
gtccctgtgcacaccctgcccagcacttacctgcagaaggtgcccgagcagcccgaggat
gctgacaaccagaagaacgtgaccaggatgatccagccccccctggacaaaaccaccact
gtgaacatccctgtcaccatcactgcccctccaggggagaccactgtcattccaatgaac
aacgtggagtttgagagcaaaccagaggagaagaaagacgtcgatgacttgacaaaaaat
gggcctaaaccaatcctgccttacagttccatgttcatcctcagccccacaaatccgatc
cggcgcctcttccactacatcgtcaacctgcgctacttcgagatggtgatcctgatcgtc
atcgccctcagcagcatcgccctggctgcagaggaccctgtccaagctgagtctcccagg
aacgacgctctgaaatacctggattatatatttacaggagtcttcacctttgagatggtg
atcaagatgattgatttggggctgctgctccaccctggctcctacttccgtgacctgtgg
aacatcctggacttcattgtggtcagtggggccttggtggcttttgccttctcaggaacc
aaaggcaaggacatcaacaccatcaagtccctgcgagtcctgcgcgtgctcaggcctctg
aagaccattaaacgtctgccaaaactaaaggctgtctttgactgtgtggtgaactccctg
aagaacgtcctcaacatcctcattgtttacatgctcttcatgttcatcttcgctgtcatc
gccgtgcagctcttcaagggccgcttcttctactgcacagacgagtccaaggagctggag
aaggactgcaggggtcagtacctcgattatgaaaaaaatgaggtggaggcacagcccagg
gaatggaaaaaatacgagttccactacgacaacgtgctctgggctctgctcacgctcttc
accgtgtccacaggggaagggtggccaactgtgctgaagcactcggtggatgccacctac
gaggaacaggggcccagccctggctaccggatggaaatgtccatcttttacgtggtctat
tttgttgtcttcccttttttctttgtcaacatctttgtggcgttaatcatcatcaccttc
caggagcaaggagataaagtgatgtcagagtgcagccttgagaaaaacgagagggcctgc
atagactttgccataagtgccaagcccctgacccgctacatgcctcagaacaagcaatcc
ttccagtacaagatgtggaaattcgtggtgtcccctccctttgagtattttatcatggtc
atgattgctctcaacaccatcgtcctcatgatgaagttctatgatgctccagaagcatat
gaagaaatgctgaaatgcctgaatattgtgtttacatccatgttttccatggaatgtgtg
ctgaagatcattgcctttggtgtgctgaattatttccgagatgcctggaatgtctttgat
tttgtaacagtgttgggaagtattactgatattttagtaacagagattgcggacacggac
aacttcatcaacctcagcttcctgcggctcttcagggcagccaggctcatcaagctcctc
cgccagggctacaccatccgcatcctgctctggacattcgtgcagtccttcaaggccttg
ccttatgtgtgtctcctcattgcaatgctcttcttcatctatgccattattggcatgcag
gtatttgggaacattgccttagatgatgaaacatccattaatcgacacaacaacttccgc
actttcctccaagccctgatgctcctgttcaggagcgctacaggggaagcctggcatgag
atcatgttgtcctgcttgagcaacagagcctgtgaccctctctctggcctcaccaaaaag
gaatgtggcagtgattttgcctatttctacttcgtgtcattcattttcctctgctccttc
ctgatgctgaacctgttcgtggcagtgatcatggacaatttcgagtacctgacccgggac
tcctccatcctcgggccgcaccacctggacgagtttgtgcgggtgtgggcagagtacgac
cccgcagcctgcgggcgcatcagttacacagacatgtatgagatgctgagacacatgtcc
ccacctctaggccttgggaagaaatgcccagctcgtgttgcctataagcgcctggtgagg
atgaacatgcccatctcccccgaggatttaactgtgcacttcacctccacgctgatggcc
ctgatccgcacggccctggagatcaaactggcctcaggcggtgtgaagcagcaccagtgt
gatgctgagctgaggaaggagatctcgctggtctggcccaacctgtcccagaagactctg
gatttgctggtgcctcctcacaaacctgatgaaatgactgtggggaaggtctatgcagcc
ctgatgatatttgacttctacaagcagaacaagaacagcagggagcaagtccagcccccc
gggggcctgtgccagcccgggccagtgtccctcttccaccccttgaaggccaccctggag
cagacccagcccgcagccttcagcaacgccaaggccttcctgcgccagaagagctcagcc
tccctcaacaacgggggagccttgccacccccagagggagggatcaaagagtccagttcc
tgggggacccagcgcacccaggacgtgttttatgaaaccaggagcccagcttttgagcga
ggccactccgaggagatccccattgagagggtggtagaaatgaaggagatcagccccaca
gttgccaacggagagccccagccaggcctggagagccagggccgggcggcctccatgcca
cggctggctgctgaaacccagcccatcccagacacgagccccatgaagcgctcggtctcc
acgctggccccgcagcgccctcacgccatgcacctctacgagtattccttggagcggatg
cctccggagcagggccaccaccaccaccaccaccgctgccaccggcggaaagagaagaag
cagaagtccgtggatagggccgcccatcacttggctgatggacaagctgtagctcaatct
ggagagtcttcttccaaggacaagaagcaggagcgtggccgctcccaggagaggaagcag
cactcctcctcctcctccgaaaagcagcgcttctactcctgcgaccgctacggcagccgg
gaccgtgcccagcccaaatctgctgaccagagcaggcccacctcccccagcgggggccca
gagcacggcccacacagacagggcagtggttcagttaatgggagccccttgctgtcgaca
tctggtgctagtaccccctgccggggtcggaggcagctcccacagactccactgacccca
cgccccagcatcacttacaagaccgctaactcctcgcccgtgcacttcaccactttccaa
acccccacgttctccccgggccgcctgagccgcgggctgtccgagcacaacgcgctgctg
cggggggagcagcagccgccgccgcccgccgtggcccgcatcggctccgacccctacctg
ggccaccgcgacgccgacagcccgcagcgcgccgcgcccgaggacacgctcaccttcgag
gaggccgtggccaccaactcgggccgctcctcaaggacttcctacgtctcctccctgacc
tcgcagtcgcaccaaatccgccgggtgcccaacgggtaccactacacgctggggctcaac
acgggccccggcgcccgaggacgcagttactaccacgaagccgatgaggatgactggtgc
tag
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integrated database retrieval system
