Taeniopygia guttata (zebra finch): 100230175 Help Entry 100230175         CDS       T01082                                  Symbol NPHP4 Name (RefSeq) nephrocystin-4   KO K16478   nephrocystin-4 Organism tgu  Taeniopygia guttata (zebra finch) Brite KEGG Orthology (KO) [BR:tgu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:tgu03037]     100230175 (NPHP4) Cilium and associated proteins [BR:tgu03037]  Primary cilia and associated proteins   Nephronophthisis-related proteins    100230175 (NPHP4) SSDB OrthologParalogGFIT Motif Pfam:  NPHP4_C2_3rd NPHP4_C2_2nd Ig_NPHP4_1st Ig_NPHP4_4th Ig_NPHP4_2nd Ig_NPH4_3rd NPHP4_SK Motif Other DBs NCBI-GeneID:  100230175 NCBI-ProteinID:  XP_030145123 Ensembl:  ENSTGUG00000002693 LinkDB All DBs Position 21:complement(3358137..3378760) Genome browser AA seq 1336 aa AA seqDB search MGEWDRVFRQHLPLPPHPQRGRARPPARSAAFRCVLKYLHGAALSQGAQYQLRLSLFDAT YHHFFGRTWRSSWRAASAAPPRSARATFNEVVYFHTSLNHPSIAAVVEVVMMAGKGDGSS QHLSCGFGIIPLFHGGSEVTDPATEDRALKLYRGTPRALLHPRFQDPAEKNKYMTVMEKS HLQYGLKSHQPLEAIFHLLPENLLISGLQTVPGLLPARGDTGDCLQKPRLMKTVTCYLER LFIHLYPSLEEFEEELLDLLNSDRLLQANTALDGEEVVVRERRLHVGVHNGLRFVQAPQV AVLVPGAELSPGRCQGVPRSGARDAGQALVLRSRIQLSEMVPHPAFRVCFLLEYVFCSTA RAGGKALSGSARSEAADMRSVRWAVWSPIPGTGDTDVILPLRGGARRGPCQALVYRTPPS SRQGKHVESGTVQFHVSTDSEEHLVTAAEILCKDRDEPKKPPTPSLRVPAPRRVPVSPRG PGLSVSQLVASPRGTGQTLQQDGAITHLEADLGSLDAEPCASDQLRALPFTPLQLPMAAV GLQACSSRVSLSRAALARLHTAGFPDILDRNQEPVEISEPVELGSFNLRLEEADPLQGNE IVLQFLAFGRDAQDSVEGLWPRTVFLTFQFYRFPPVTTPRLQLVSTEGVLATGLAVPAQL LVRVNEDGTPTRAPGLQLKYMVDPAFLRLGEQRWFLRYLAEHSLQIDIWDGDSLLHFGSA AIKLEPLLRQGQTAVRTYHELEVATAEYEPDGTVMGREALRHGALRPLGVRVAVRGRLHL CLANIGHPCEETPEQLPAHSCIVTAPDSTVTTPGGRGCSLNTPGGRRTAWARRLVDVDNE LEAALRSRRPEGWPKQRAWDLQVIDSYRDHIKGESIYQMLSQAITATRTVHAVLGTAEFF EFALKNPYGVQHTVTIEVDHPELSVILDPREWRHFKELTRSVTPVEEDMFHLSEDLKPQV YLRPSETVHIPFKYQTFSADPAVVAAQGPAGLGTGASENTQSLGKSGAKQTKLIQVSFQV SRGKPIALLRVKVEPQPHVVDQTFRFYHPELTFLKKTIRLPPWHTLPGTPVGVPGGQPEM FVRCSDPDIICETKSLGPGEPQDIFLKVAGGPSPQIKKFFVAIYTDAWLAAPVQIWQFYL HSLQRLDVACTAGQLTRLSLLLRGTAAPRRVRAFTSHPQELQVDPNGAFVLPANGIQDLY IGVRPRRAGSKFIYLNLVDVESHQLVSSWLLCLSCRQPLISKAFEISLPAGGGKGCNKRI TYTNPYPSPRLYFLCTNRPDLLQFKEDSFEVAGGEVYTIGLRFAPSQTLGEEEILIHIND HEDKNEETFCVKVLYQ NT seq 4011 nt NT seq  +upstreamnt  +downstreamnt atgggcgagtgggaccgggtgttccggcagcacctgccgctgccgccgcacccgcagcgg ggccgggcccggcccccggcccgctccgccgccttccgctgcgtcctcaagtacctgcac ggcgctgccctgtcccagggagcccagtaccagctgcgcctgtcccttttcgatgccacc taccaccacttctttgggaggacctggaggagcagctggcgagctgccagcgctgcccca ccgcgctcggccagggcgacgttcaacgaggttgtttatttccacacctccttgaaccac cccagcattgctgctgttgtggaagtggtaatgatggctgggaaaggggatgggagctct cagcacctttcctgcggctttggaatcatccccctcttccacggcggatcagaggtgaca gacccggccactgaggacagagcgctgaagctgtaccgtgggacaccacgtgccctactg cacccacgcttccaggaccctgcggaaaagaacaaatacatgacagtgatggagaagagc cacctgcagtatggcctgaagtcccaccagcccctggaggcaatatttcacctgcttcct gaaaacctgttgatatctgggctgcagactgttcctggcttgctgccagcacggggagac acaggagactgcttgcagaagccccggctgatgaagactgtcacctgctatctggagcgg cttttcatccacttgtacccttccctggaggagtttgaggaggaactgctggatttactg aacagtgatcgcttacttcaggctaacactgcgctggatggtgaggaggtggtggttcgg gagcggcggctgcacgtcggtgtccacaacggcctgcgcttcgtccaggcaccgcaggtc gctgtgctggtgccaggggcagaattgtcaccaggtcgctgtcagggggtgcccagatct ggagccagggatgcaggtcaagccctagtgctgaggagccgcatccagctgagtgaaatg gtccctcacccggcattcagagtctgcttcctgctggaatatgtcttctgcagcacagca agagctggtggcaaggccctgtccggcagtgcccgcagtgaggcggccgacatgcgctcg gtgcgctgggctgtctggagccccatcccgggcaccggggacacggatgtcatcctcccc ctgcgaggtggcgcccgccgtggcccctgccaggccttggtgtaccggacccccccgagc tcccggcaggggaagcacgtggagtctgggactgtccaattccatgtttccactgattcg gaagaacatcttgtaactgctgcggagatcctatgtaaagacagggacgagccgaagaag cctcctacgccatcgctgagagtgccagccccacgacgagtgccagtctccccacgagga ccagggctgtcggtgtcccagctcgtggcatcgccacggggcacaggccagaccctgcag caggatggggccatcacccacctggaggccgacctgggctcgctggacgcagagccctgt gccagcgaccagctgcgggcgctgcccttcaccccgctgcagctgcccatggctgctgtg gggctgcaggcatgcagttcccgtgtgtccctctctcgtgccgcgctggcgcgcctgcac accgccggctttccggacatcctggaccgcaaccaggagcccgtggaaatctcagagcca gtggagctgggcagtttcaacctgcggctggaggaagctgaccctctgcaaggcaatgaa atagtcctgcagttcctggcttttggcagagatgcccaggacagcgtggaggggctgtgg ccaaggactgtcttcctcaccttccagttctaccgtttcccaccagtcaccacgccccgg ctgcagctggtcagcacagagggggtgctggcgaccgggctggctgtgccagcacagctc cttgtccgtgtcaatgaggatgggaccccaaccagagccccgggcttgcagctgaagtac atggtggatccagctttcctgcggctcggggaacagcgctggttcctgcggtacctggct gagcacagcctccagattgacatctgggatggagattccctgctccattttgggtctgct gccattaaactggagcccctgctgcgccagggccagacggccgtcaggacctaccacgag ctggaggtggccacggccgagtacgagccggacgggacggtgatgggccgggaggctctg cggcacggcgccctgcggcccctcggggtccgtgtggctgtgaggggccgcctccacctc tgcctggccaatattggtcatccatgcgaggagaccccagagcagctgccagcccattcc tgcattgtcactgcaccagacagcactgtcaccaccccaggtggcagagggtgctccctg aacactcctggtggcaggaggacggcgtgggcacggaggctggtggacgtggacaatgag ctggaggccgcgctgcgcagtcgccggccagaaggctggccaaagcagcgtgcctgggac ctgcaggtcatcgactcctaccgggatcacatcaagggagagagcatctaccagatgctc agccaggccatcacagccacccgcactgtccacgctgtgctggggacagctgagttcttt gagttcgccctgaagaacccgtacggcgtccagcacaccgtgaccattgaggtcgaccac cctgagctgagtgtcatactggacccgagggagtggcgccacttcaaggagctgaccagg agtgttacaccggtggaagaggatatgttccatctcagtgaggatctcaagcctcaggtc tacctgcgccccagtgagactgtccacatccccttcaaataccagaccttctccgcagac cctgccgtggttgcggcacaggggccagctgggctgggcactggtgccagtgagaacact cagtcccttgggaagagtggggccaagcagacaaagctcatccaggtctccttccaggtg agcagggggaagcccattgcactcctgcgggtgaaggtggagccgcagccccatgtggtg gaccagacctttcgcttctaccacccagagctcaccttcctgaagaagactattcggctg cctccctggcacaccctccctggcacgccggtgggggtgccaggagggcagcctgagatg tttgttcgctgcagtgaccctgacatcatttgtgaaaccaaatccttggggcctggtgag ccacaggacatctttctcaaagtagccggaggaccaagcccgcagatcaagaagttcttt gttgctatttatacggacgcctggctggcagcacctgtccagatctggcagttctacctg cactctctgcagcggctggacgtcgcctgcacggccgggcagctcacgcgcctctccctg ctgctgcgcggcaccgcggccccgcgcagggtgcgcgccttcacctcccacccccaggag ctgcaggtggatccgaacggtgcctttgtcctccctgccaacggcattcaggacctctac attggtgtgaggccacggcgggctggcagcaagttcatctacctcaacctggtggatgtg gagtcccaccagctggtgtcctcctggctgctctgcctgtcctgcaggcagcctctcatc tccaaggcctttgagatctcgctgccagcgggaggtgggaaaggctgcaacaagcgcatc acctacaccaacccctacccctcgccccggctctacttcttgtgcaccaaccgccctgac ctgctgcagttcaaggaggactccttcgaggtggctggaggggaggtgtacaccatcggc ctgcgctttgccccgagccagactctgggggaggaggagatcctgattcacatcaatgac cacgaggacaagaacgaggagaccttctgtgtgaaggtcctgtaccagtga

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