Taeniopygia guttata (zebra finch): 100230195
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Entry
100230195 CDS
T01082
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 isoform X1
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tgu04040
]
100230195 (HCN4)
Ion channels [BR:
tgu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
100230195 (HCN4)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
100230195
NCBI-ProteinID:
XP_032606118
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Position
10:2382136..2515851
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AA seq
1212 aa
AA seq
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MDKLPPSMRKRLYSLPQQIGPKASIMDEEDDSDKDTRRKSIRLKPLPSPSAGSTRALGGD
PGRGGDPGLLETEAGGKGAKTSTNGDCRRFKGSLSSLTSRHLHDAAEEKRLIGGEGEPAS
PGEDKSPPGSGELEQGLPVPPAPASPPEPQQPPPRACSSTSIKVEGGGGCDQITPDEEQR
LGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGFWIIHPYSDFRFYWDL
TMLLLMVGNLIIIPVGITFFKDENTTPWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEII
LDPQRIKMKYLKSWFVVDFISSIPVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLR
LLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPD
DCWVSLNRMVNDSWGKQYSYALFKAMSHMLCIGYGQQAPVGMSDVWLTMLSMIVGATCYA
MFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEE
SILGELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLKFEVFQPGDYIIREGT
IGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICLLTRGRRTASVRADTYCRLYSLSVD
NFNEVLEEYPMMRRAFETVALDRLDRIGKKNSILLHKVQHDLNSGVFNYQENEIIQQIVQ
HDREMAHCAHNVQAAAAAASTPTPVIWTPLIQAPLQAAAATTSVAIALTHHPRLPTAIFR
PPVSVLGSLGQQPSQTPRQLKRFQSLIPSAGPSAVGSPSSTPSQLHTPGAETPSSSSFHI
QQLAGFSAAAGLGQFQVGSPLGGSGQPGLSSTSSVGLSHFQNAPSGSPLGAAQPLQQQQQ
QQQQQQQQQQQQQPALSSSGFGHFQQASASSPSTSLTQLSSNSPPSLLNQFQPTTRPLQG
GQSQQLSGSGTLGGLNHFQAPPSSNSPSSSLSQLAQASGGPSAGLCQTHPSALGSLTGTI
AQLHQERPPFASASPLQQPGTASPSYTPSGLSPPSQSPVATRTFQSGPGGASGSQGSLLL
PQPASPPAQRLPARGTVPPGRLNQDIKLISASQPSLPQELAQTLGRHSSPHSSRESVSSF
SPFPGGGSGLLGRPCSSIPGRVTLPRQMSSGSLPHPLALGAGAAPLTAGGRKESIVLTGD
LEPVRSKLPSNL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgcccccctccatgcgcaagagactctacagcctgccccagcagatcgga
cccaaggcgtcgatcatggacgaggaggatgacagcgacaaggacacccgcaggaaaagc
atcaggctcaagccactgccttcgccctctgctgggagcacccgggccctcggaggggac
cccggccgagggggggaccccggcctgctggagacggaggccggcggcaagggcgccaag
accagcaccaacggggactgccgccgcttcaaagggagcctgtcctcgctcaccagcagg
cacctccacgatgcggccgaggagaagcggctcatcggcggcgagggggagccggcctct
cccggggaggacaagagcccccccggcagcggggagctggagcaggggctgcctgtgccc
ccagcgcccgcctcacccccggagccccagcagccgcccccccgggcctgctcctcgacc
tccatcaaagtggagggaggtggagggtgcgaccagatcaccccagatgaggagcagagg
ctcggccaggcaggtttcatgcagaggcagttcggggccatgctccagccgggggtcaac
aaattctccttgaggatgtttggcagccagaaggccgtggagagggagcaggaaagagtt
aagtctgccgggttctggatcatccatccctacagcgacttcaggttttactgggatctg
accatgctgctgctgatggtagggaacctgatcatcatccctgtgggcatcactttcttc
aaggatgaaaacaccactccatggattgttttcaacgtggtttcggacacgttcttcctc
atcgacctcgtcctcaacttccggacaggcatcgtggtggaggacaacaccgagatcatc
ctggacccgcagaggatcaagatgaagtacctgaagagctggttcgtggtggattttatc
tcctccatccccgtggactacatcttcctgatcgtggagacgcgcatcgactccgaggtg
tacaagacggcgcgggccctgcgcatcgtgcgcttcaccaagatcctgagcctgctgcgc
ctgctgcgcctctcccgcctcatccgctacatccaccagtgggaggagatcttccacatg
acctacgacctggccagcgccgtggtgaggatcgtcaacctcatcgggatgatgctgctg
ctgtgccactgggacggctgcctgcagttcctggtgcccatgctgcaggacttccccgac
gactgctgggtgtccctcaaccgcatggtgaacgactcctggggcaagcagtactcgtac
gccctgttcaaggccatgagccacatgctgtgcatcggctacgggcagcaggcgccggtg
gggatgtcggacgtgtggctcaccatgctcagcatgatcgtgggggccacctgctacgcc
atgttcatcggccacgccaccgccctcatccagtccctggactcctcgcgccgccagtac
caggagaagtacaaacaggtggagcagtacatgtccttccacaagctgcccgccgacatg
cggcagcgcatccacgactactacgagcaccgctaccagggcaagatgttcgatgaggag
agcatcctgggcgagctgagcgagcccctgcgcgaggaaatcatcaacttcaactgccgc
aagctggtggcctccatgcccctgtttgccaacgcagaccccaactttgtgacatccatg
ctgaccaagctgaagtttgaggtgttccagcccggggactacatcatccgggagggcacc
atcggcaagaagatgtacttcatccagcacggcgtggtcagcgtcctcaccaagggcaac
aaggagaccaagctggccgacggctcctacttcggagagatctgcctgctgacgcgcggc
cggcgcacggccagtgtgcgcgccgacacctactgccgcctctactccctgtccgtggac
aacttcaacgaggttctggaggagtaccccatgatgaggagagccttcgagaccgtggct
ctggacaggctggacaggattggcaagaagaactccatcctgctgcacaaagtacagcac
gacctcaactcgggggtgttcaactaccaggagaacgagatcatccagcagatcgtgcag
cacgaccgggagatggctcactgtgcccacaacgtgcaggccgccgccgccgccgcctcc
acgcccacgccggtcatctggacgccgctgatccaggccccgctgcaggccgccgccgcc
accacctcggtggccatcgccctgacccaccacccgcgcctgcccacggccatcttccgg
ccgcccgtgtccgtgctgggctccctgggccagcagcccagccagaccccccggcagctg
aagagattccagtcgctcatcccgtccgccggcccctctgccgtgggctccccgtccagc
accccgtcccagctgcacacgccgggcgccgagacgccctcgtcctcctcgttccacatc
cagcagctcgccggcttctcggccgccgccggcctgggccagttccaggtggggtcccct
ctggggggctccggccagccggggctgagcagcacctcctcggtggggctgagccacttc
cagaatgcaccctctgggtcacccttaggcgcagctcagcccctgcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagccagccctctccagcagtgga
tttgggcacttccagcaagcctcagccagctccccatcaacatccctcacccagctctca
tcaaactccccccccagtctcctgaaccagttccagcccaccacgagaccactgcagggg
ggacagtcgcagcagctctcgggcagtgggaccctggggggactgaaccacttccaagcc
cctccttcttccaactctccatcctccagcctcagccagctggcgcaggcctcgggcggg
ccgtccgcaggcctgtgccaaacacatccaagtgctttaggatctctgactggaacgata
gcccagctccaccaagagcggcctcccttcgcctccgcgtccccgctccagcagcccggc
accgcctctccctcctacaccccttctggccttagtcctcccagtcagagcccggtggcc
accagaactttccagagcggccctggcggggcctcgggctcacagggctcgctgctgctg
ccgcagcccgccagccccccggcccagcggctgccggcgcgcggcacggtgccgccgggg
cgcctcaaccaggacatcaagctgatttctgcgtcccagccctccctgccccaggagctg
gctcagacgctgggccgccacagctctcctcattcctctagagaatctgtttccagcttc
tcccctttcccgggcggcgggagcggactgctggggaggccgtgtagctccatccccggg
cgggtgacgctgccacgccagatgtcctcaggttctctgccacacccgctggccttggga
gccggcgccgctcccctgactgcgggcgggcggaaagagtccatagtgctcacgggggat
ctggagcccgtcaggtccaaactgccctccaatttgtga
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