Taeniopygia guttata (zebra finch): 100230248
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Entry
100230248 CDS
T01082
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100230248 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tgu03310
]
100230248 (RORA)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100230248 (RORA)
Nuclear receptors [BR:
tgu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100230248 (RORA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
HisG
Motif
Other DBs
NCBI-GeneID:
100230248
NCBI-ProteinID:
XP_012433513
Ensembl:
ENSTGUG00000005333
UniProt:
H0Z4K8
LinkDB
All DBs
Position
10:4380445..4734977
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AA seq
468 aa
AA seq
DB search
MMCVVLAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQ
PGEAEPLTPTYNITTNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQITWQTFLQEEIENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHL
TEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgttgtgctcgccgcgatgaaagctcaaattgaaattattccatgcaagatc
tgtggagacaaatcatcaggaatccattatggtgtcattacatgtgaaggctgcaagggc
tttttcaggaggagtcagcagagcaatgccacgtactcgtgtcctcggcagaagaactgt
ctgatcgaccggaccagccggaaccgctgccagcactgtcgcctacagaaatgccttgcc
gtggggatgtctcgggatgctgtaaagtttggtcgaatgtcaaaaaagcagagggacagc
ctgtacgccgaggtgcagaaacaccgaatgcagcagcagcagcgggatcaccagcagcag
ccaggagaggcagaaccactcacaccaacatacaatatcaccaccaatgggttaacagag
ctacatgacgacctcagtaattacattgatgggcatacccctgaaggtagcaaagcagac
tctgcagttagcagcttctacttagacatacagccttctccagatcagtcgggtcttgat
attaatggaatcaaaccagaaccaatatgtgactacacaccagcatcgggcttcttccct
tattgttcttttacaaatggggagacctctccaactgtgtccatggcagaattagaacat
cttgcacagaatatttccaagtcacacatggaaacttgccagtacttgagagaggagtta
cagcagataacatggcaaacttttctgcaggaagaaattgagaactatcagaacaagcaa
agggaggtaatgtggcagttgtgcgcagtcaaaataacagaagctatacagtatgtagtg
gaatttgccaaacgcattgatggctttatggaactgtgtcaaaatgatcaaattgtgctt
ttaaaagcagggtctttagaggttgtgttcatcagaatgtgccgtgcctttgactcccag
aacaacacagtctactttgatggcaagtatgctagcccagaggttttcaagtccttaggt
tgtgaagacttcattagctttgtgtttgaatttggaaaaagtttatgttctatgcacctg
acagaagatgagatagctttgttttctgcgtttgttttaatgtcagcagatcgctcatgg
cttcaggagaaagtaaaaattgaaaaactccaacagaagatccagctagcacttcagcac
gtcctacagaagaaccaccgagaagatggaattcttacaaagttaatatgcaaagtgtct
actttaagagcactgtgtggacgacatacagaaaagcttatggcatttaaagcaatatac
ccagacattgtgcgacttcattttcctccactttacaaggagttgttcacttcagagttt
gagccagcaatgcagattgatgggtaa
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