Taeniopygia guttata (zebra finch): 100230331
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Entry
100230331 CDS
T01082
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100230331 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
100230331 (SMARCD1)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100230331 (SMARCD1)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100230331 (SMARCD1)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100230331 (SMARCD1)
PBAF complex
100230331 (SMARCD1)
GBAF(ncBAF) complex
100230331 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
100230331
NCBI-ProteinID:
XP_002193185
Ensembl:
ENSTGUG00000003605
LinkDB
All DBs
Position
29:complement(941317..948446)
Genome browser
AA seq
511 aa
AA seq
DB search
MAARAGFQSGPASGGGAGATPGAALGPGAPGGAVRMGPAPGQGLYRSPLPGAAYPRPGML
PGGRLAPQGPAMGPPGYGGSPAVRPALAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAK
KKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRI
FISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIEL
DKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARL
LGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHAL
LMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKI
HETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQ
PWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggccgggtttcagtcggggcctgcgagcggcggcggcgctggggccacg
cccggggccgcgctgggcccgggagcgccgggcggggcggtgcgcatgggcccggcgccg
gggcagggcctgtaccgctcgccgttgcccggagccgcctacccgcgccccgggatgctg
ccgggcggccgcctggcgccgcagggcccggccatggggcctcccgggtacggagggagc
ccagcggtgcggcccgcgctggcgcaggccgggctggaccaggctcgcaagcggccggcg
ccgcagcagcttcagcaggtgcagccgcaggcggtgcccaaccgcaaccacaatgccaag
aagaagaagatggcagataaaatcctcccgcagcggatccgtgagctcgtgcccgaatcc
caggcctacatggacctgctggccttcgagaggaagctggaccagaccatcatgaggaag
cgcctggatatccaggaggctctgaaacgtcccatcaagcaaaagcgaaagctgcgtatt
tttatctccaacaccttcaaccccgccaagtcggacgcggaggacggcgaaggaaccgtc
gcctcctgggagcttcgggtggaaggacggctgttggaggattctgctctgtccaaatat
gatgccaccaagcagaaaaggaaattttcgtccttctttaaatctctggtcattgaactt
gataaagacctgtatggccctgacaatcacctagtagagtggcacaggactgctacgact
caggagacagatggcttccaggtgaagaggccgggggatgtgaacgtgcgctgcactgtc
ctgctgatgctggattaccagcctccccagttcaaactggatccacgcctggctcggctc
ctgggcatccacacccagacccggcccgtgatcatccaggccctgtggcagtacatcaag
acccacaagctgcaggatccccacgagcgggagtttgtcatctgtgacaagtacctgcag
cagatattcgagtcgcagcggatgaagttctctgagatcccacaaaggcttcatgccttg
ctgatgccccctgaaccgatcatcatcaatcatgtgatcagtgttgacccaaatgaccag
aagaagacagcctgctatgacattgatgtggaggtggacgataccctgaaaactcagatg
aattcctttctgctctccacagccagtcaacaggaaattgctgctctggataacaagatc
catgaaacaattgagaccatcaaccagctgaagacacagcgtgaattcatgctgagcttt
gcccgagatcctcagggcttcatcaacgactggctccagtcccagtgccgggatttgaag
acaatgactgatgtcgttgggaatcctgaggaggagcgcagggccgagttctacttccag
ccgtgggcgcaggaagccgtgtgccgatacttctactccaaggtgcagcagagacggcag
gaactggagcaggccctggggatccggaacacatag
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