Taeniopygia guttata (zebra finch): 100230486
Help
Entry
100230486 CDS
T01082
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100230486 (RNF38)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100230486 (RNF38)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100230486 (RNF38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_UBOX
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
100230486
NCBI-ProteinID:
XP_012432827
Ensembl:
ENSTGUG00000000096
LinkDB
All DBs
Position
Z:complement(6898843..7004529)
Genome browser
AA seq
661 aa
AA seq
DB search
MPVAARSAAPGAQPDAGFHGPARQRDRGVAPRGEESGGERHLRQAGEAGRSGRWVASSAA
PFLPAFSSSPPPPPASSVASSPAGGAAVAASTSPSAASLLPALPRTRARVRSCFGFPGLT
MSGGSGRFPPPAALCPPPPLHGPSLPEAGARSQGQGSPAGHGAPRGAPGSRAPPPGSIGP
SFQCHSIHQDHICTDDSDKSEDSPSPKRQRLSHSVFDYTAASPAPSPPMRPWEMTPNRQP
ALARPNQHHFSGERCNTPARNRRSPPVQRQRTRRDRLSRHNSISQDENYHHHLSYGQQQA
IEEPRAFHPPNVSPRILHPAAHPPQQNAVMVDIHDQIHQGTVPVSYAVTTVAPHGIPLCT
GQHIPARSTQQVAGCSVVFSGHHRPVCSVSPTMLQACSVQHLPVPYAAFPPLISSAPFLL
HPPHIHTHHPPHLPPPGQFVPFQAQQSRSPLQRIENDVELLGEHLPVGGFTYPPSAHPPT
LPPSAPLQFLAHDPLHQEVSFGVPYPPFMPRRLTGRSRYQSQQPIPPHPYHPSLLPYVLS
MLPVPPAVGPPFSFELDVEDGEVENYEALLNLAERLGEAKLRGLTKADIEQLPSYRFNPN
NHQSEQKLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDS
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggccgcccgctcggcagcccccggggcgcagcccgacgccggctttcatggc
cctgcccgccagcgggaccgcggcgtcgctccccgcggcgaggaaagcggcggcgagcgg
cacctccgtcaggccggcgaggcgggccggagcggcagatgggtggcttcttccgccgcc
cccttcctgcctgccttctcctcctcccctccgccgccccccgcctcctccgttgcctcc
tcccccgctggtggggccgccgtcgccgcctccacctccccctcggctgcctcccttctc
ccggcactcccccggacccgcgcccgtgtccgctcctgcttcggctttccgggactcacc
atgagcggcggttccggtcgctttccgccgcccgccgccctctgcccgccgccgcccctc
cacgggccgagcttgccggaggcgggagcgcggagccagggccagggcagccccgccggg
cacggcgcaccccgcggcgccccgggctccagagccccgccaccaggtagtattggtcca
tcgtttcaatgccactcaatccatcaagatcacatttgtactgatgacagtgacaagagt
gaagacagtcctagtcccaagcgacaacgcctttcccattcagtcttcgactacacagca
gcatcaccagccccatcaccaccaatgcggccatgggagatgacaccaaataggcagcct
gctttggctcgacccaaccaacaccacttctcaggggaacgatgcaacacacctgcacga
aacaggaggagtcctcctgttcaacgacagagaacaaggagagatcgcttgtctagacat
aattccattagccaggatgaaaactatcatcaccatctctcctatggacagcagcaagca
atagaagagcctcgagcctttcacccaccgaatgtatctcctcgtatcttacacccagct
gctcacccaccacagcagaatgcagtgatggttgacattcatgatcagatccatcagggc
acagttcctgtttcatacgcagtgacaactgtggctccacatgggatacccctttgcaca
ggccagcacattccagcccgcagcacacagcaggtcgcagggtgctcggttgttttcagt
ggccatcaccgtccagtctgcagcgtgtctcccacaatgcttcaggcgtgctcagtccag
caccttcctgtaccatatgcagcatttccacccctcatttctagtgccccattccttttg
catcctcctcatatccatacacaccaccctcctcacttacctcctccaggacagtttgtt
cctttccaagcacagcagtcacggtcgccacttcaaaggatagaaaatgatgtagaattg
cttggagaacatcttcctgtaggaggttttacataccctccctcagcccatccaccaacg
ttgcctccctcagctcctcttcaattcttagcccatgatccattacaccaggaggtgtca
tttggggtaccttacccacctttcatgcctcgaagactcacagggcgcagcagataccaa
tcacagcagccaataccaccacacccttaccatcccagcctattaccttatgtgctatca
atgctcccagtgccaccggcagttggaccacctttcagctttgagttggatgtggaagat
ggagaggtagaaaactatgaggcactgctgaacttggcagaacgtctgggagaagccaaa
ctacggggattaacaaaagcagacattgagcagcttccatcctacaggttcaatccaaac
aatcaccagtcagagcagaaattatgtgtggtgtgcatgtgtgattttgagtcaaggcag
ctacttagagtcttaccctgtaaccacgagttccatgccaaatgtgttgataagtggctg
aaggcaaatcgtacctgcccaatttgtagagctgatgcttcagaagtgcatcgtgattca
gaatga
DBGET
integrated database retrieval system
