Taeniopygia guttata (zebra finch): 100230617
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Entry
100230617 CDS
T01082
Symbol
MLH3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100230617 (MLH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100230617 (MLH3)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100230617 (MLH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
MutL_C
DNA_mis_repair
HATPase_c
Motif
Other DBs
NCBI-GeneID:
100230617
NCBI-ProteinID:
XP_030130560
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Position
5:complement(39169726..39189986)
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AA seq
1432 aa
AA seq
DB search
MIRRLVEDVRARLRSEVTVNSLGHCVEELVLNSIDAKATCVAIRVDLEAFKIQVVDNGSG
MGKEDLKAVGKRYFTSKCSSVRDLENLTFYGFRGEALASIANMASVVEISSKTSRTAKTF
MKLFHNGQALEVCEAELNRPSGGTTVTVCNLFHQLPVRRKCMDPVLEIERVRQKVEAVSL
MHPSVSLSLRNDVSCSMVLQLPKTRDVYSRFCQIYGLGRSQKLREINHKSGGFEISGFIS
TEGHYNKNMQFLYVNKRLVLKTRLHKLIDFLLRKESVICKAKSVPANRQANSSPGRYRSG
PELYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVKIFLKREHLFIEPCS
EDIREFNERNDFCLHNAPVLKPSILDKKSIQESFKKACNEIVDSYEICSLQSKDVKRKSI
TGKKSSNLTESSRSIQETKNAPVQNTAESSDPCKNNKAEIPLPSKEDTISDLIKSNTSEQ
EPEYTKSSQKVSDTHLKPSEHLCSSFSGGARSEIREIYGCGDLGDCAENNIKDAGSQQGQ
VTQESSKVLVLNKDVIQSLHEREDPTETAVAHETVSGSSLMRLCNARRNRGMAEGIDDAR
RGAVSSMPLKLCLTDLIKSVMQNESPHDCEQTETNLALNTPCRPGPVSAKGIFDHKVNVV
FQSSNAKGISSNTNKEYTASLTRDVVMTDGNENKPLSHRLREEIAVPTAAHKRPYEMSNN
TELPLASSSGIPRKKIVIKNTRKQIAVPRSQPSKKLSLSTQLGSLEKFRRYYGRVKATLP
TPVSEQNECGLPVLNSETNCDFSKNGNGNHDNFGSCETLPAEDRDSNSISQGFGSLEKTL
FCSGEMSQDKQALCQSPLTFSDYSLVSNKDTSSKRSPGSLSSKLSRMKTDHKEVGQLGEQ
FQTDSNRKDDHSFDHESSNNDFLYNVCQTHKSPVEKMRERKSSVSKEAVCSQSDVVIAES
VKSPVSSSSLSSIEGEYTVSSVLSLPAKNDCTNIICKDKSTLGESSEQNMKDTEVPHVTL
QRNLEFSADNTRTDNPRNELCSVWLQDFDALSGKTVYINKATGLSTYGTPPSEGFQTACI
QDITTMAVNVVSENGFQFRCHPFRSEIVLPFLPRPRKEKTQASQNLRDAEGESLQSLLLE
WDNPVFVPCPEIAVDVTSGQADSLAVKIHNILYPYRFTKDMVHSMQVLQQVDNKFIACLI
NTRNGMEKKADGNLLILVDQHAAHERIRLEQLIADSYEKEAAACGKKKILSSSISPPLEI
EVTEEQRRFLRCCYKNLEDLGLELSFPETNNSLILVRKVPMCFIEREANELRRKRQPITK
SIVEELIQEQVELLQTTRGGARGTLPLTFLKVLASQACHGAIKFNEHLTLEESCRLIEAL
SSCKLPFQCAHGRPSMLPLADIDHLQQEKQPKPNLTRLRKMARAWQLFGKKK
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacgtttggtggaagatgtgcgagccaggttgcgttctgaagtcactgtcaac
tcgctcggacactgtgttgaggagcttgtcctcaatagcatcgatgccaaagcaacatgt
gtagctatcagggtggatttggaagcttttaagatccaggtggtggacaatggctctggg
atggggaaggaggacctaaaggctgttggaaagcgctacttcaccagcaagtgcagctca
gtgagagacttggagaacctgactttctatggcttcagaggagaggctttggcaagtata
gccaacatggccagtgtagtggaaatctcatctaagaccagcaggacggcaaaaacgttt
atgaagctgtttcacaatgggcaggcactggaagtatgtgaagctgaattgaacagacca
agtggcggaactacagtgaccgtgtgcaatctgttccatcagttaccagtgaggagaaag
tgtatggatcctgtgctggaaattgagagagtgagacagaaggtggaggctgtttcgcta
atgcatccttctgtttccctttctttaagaaatgatgtttcttgttctatggtgcttcag
ctccctaagacaagagatgtatactctcggttttgtcaaatttatggactgggcagatct
cagaagctgcgagaaataaatcacaaatctgggggatttgagataagtggttttatcagt
accgagggacattacaataagaatatgcagttcttgtatgtgaataagaggcttgtttta
aagacaagactacataaactaattgattttttattaagaaaagaaagtgtaatttgcaag
gcaaagagtgtccctgcaaaccgacaggctaattcaagtcctggtcgctatcgctctggg
ccagagttgtatgggatctttattctcaatgtaacctgtgcatacagtgactatgatgtg
tgcctggaacctgcaaaaacactgattgagttccagaactgggatgttcttctaacttgc
atagaggaaggagtgaaaatatttttgaagcgagagcatttatttattgaaccttgtagt
gaggacatcagagaatttaatgaacgtaatgacttttgtttgcataatgctccagttctg
aagccttcaattcttgataagaagagcatccaggaaagttttaagaaagcatgtaatgaa
attgtggattcttatgaaatatgtagcttgcaatcaaaagatgtcaagaggaaatccatt
actgggaaaaaaagttcaaatctgacagagtcaagtagaagtatacaggaaactaaaaat
gccccagttcagaacactgctgaatcatctgatccatgtaagaacaataaagcagagatt
ccattgccaagcaaagaggacacaatttctgatttaattaaatcaaatacatccgaacag
gagccagaatacactaagagttcccaaaaagtatctgatactcatctgaaaccttcagaa
catctttgttcctctttcagtggaggggccagatcagaaataagagaaatatatggttgt
ggtgacctaggggattgtgcagagaataatataaaagatgcgggcagccagcaaggtcaa
gtaacgcaggaaagcagtaaggttcttgtcttaaataaggatgttattcaatcactgcat
gagagagaagaccccactgaaacagcagtagcacatgaaactgtctctggaagttcatta
atgaggctgtgtaatgcaagaagaaacagggggatggctgaagggatagatgatgccaga
agaggggctgttagttcaatgccattaaagctgtgccttacagacctcataaaaagtgtt
atgcaaaatgagtccccacatgactgtgaacaaacagaaacaaatcttgcattaaacaca
ccgtgtaggcctggccctgtcagtgccaagggtatttttgaccacaaagtgaatgttgtg
tttcagtcttcaaatgctaagggtatttccagtaatactaataaagaatatacagcttct
cttaccagagatgtagttatgactgatggtaatgagaacaaacctttgtcacatcggctg
agggaggagatagctgtgcctactgctgcccataaaagaccttatgaaatgtcgaacaat
acggaattgccactggcatcttcttcaggtattcctcgcaagaaaattgttatcaaaaac
acaagaaaacagatagctgtgccaagatcgcagccctctaagaaactgagcttgtccaca
cagctgggatcattggaaaagttcaggaggtattatgggagagttaaggctacactacca
acacctgtgtcagagcaaaatgaatgtggtctcccagttcttaattcagaaactaactgt
gatttttcaaagaatgggaatggcaatcatgataactttggcagttgtgaaactctacct
gcagaagatagagattctaatagtattagccaaggttttggttccttagaaaagacttta
ttttgcagtggagaaatgtcacaggacaaacaggccctttgtcagagtcctttgacattc
tcggattactctctggttagtaacaaagatacaagtagtaaaagatctccaggatcatta
tcatccaaactgtccagaatgaaaactgatcacaaagaagtaggacaacttggtgaacag
ttccaaacagactcaaatagaaaagatgaccattcttttgatcatgaatcctcaaataat
gattttttgtataatgtttgtcaaacacataaatccccagtggaaaaaatgagggagcgt
aagtccagcgtttctaaggaggctgtgtgctcgcaatcagatgttgtgatagcagagtct
gtgaagagtcctgtcagctcgtcatctctcagcagtatagaaggagagtacacagtctct
tcggttttatcgttacctgctaaaaatgattgtactaacatcatctgtaaagataaaagt
acattaggtgaatcctcagaacaaaatatgaaagataccgaggttccacatgtgacctta
caaaggaacttggaattctctgctgacaacacaagaacagacaatcccaggaatgagttg
tgttctgtctggctgcaagattttgatgctttatcgggtaagacagtatacatcaataaa
gcaacaggactcagcacctacggcactcctcctagtgaaggatttcaaactgcctgcatt
caagatataacaacaatggctgtgaatgttgtttcagagaatgggtttcagttcagatgc
catccctttagaagtgagattgtgcttcccttcctacctagacctcgaaaagagaagact
caggcgagccagaatctgagagatgctgaaggggagtctctccagtcattgcttttagaa
tgggataatcctgtttttgttccctgcccagagattgcagttgatgtgaccagtggtcag
gctgacagtttggctgtgaaaattcacaatatcttgtatccttatcgtttcaccaaagac
atggttcattcaatgcaggttcttcagcaagtggacaataaatttatcgcttgtttaatt
aacactaggaatggaatggaaaaaaaagcagatggaaacctcttgattttggtggaccaa
catgcagctcatgaacggatccgcttggagcagctgattgcagattcctatgagaaggaa
gctgcagcatgtggcaagaagaaaatactgtcatcctccatctctccccctttggagatt
gaagttactgaagaacaaagaagatttctacgatgctgctataaaaatttggaggacttg
ggtcttgaattatcatttcctgagacaaacaactccttgattcttgtgaggaaggtgcca
atgtgttttatagaaagagaagccaatgaattacgacggaaaagacaacctatcactaaa
agtattgtggaggagcttattcaagaacaagttgagctattacagaccacaagaggagga
gcacgagggacactgcctctgacatttctgaaggtgttagcttcccaggcctgtcatgga
gctattaagtttaatgagcatttgactttggaggagagctgcaggcttattgaagctttg
tcatcttgcaagctacccttccagtgtgctcatggaagaccttcaatgctgcctcttgca
gacatagaccatctacagcaggaaaaacagcctaaaccaaatttgactaggctgaggaag
atggcacgagcatggcaactatttggaaaaaaaaaataa
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