Taeniopygia guttata (zebra finch): 100230684
Help
Entry
100230684 CDS
T01082
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100230684 (GAPVD1)
Membrane trafficking [BR:
tgu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100230684 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
100230684
NCBI-ProteinID:
XP_030142783
Ensembl:
ENSTGUG00000007305
LinkDB
All DBs
Position
17:10408665..10435442
Genome browser
AA seq
1488 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVSSEKQLIQRLNADVLKTAERLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPVQQEKLFGEKGT
EKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTALVGF
MRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
GQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNMLMDQHGDHEGSSQETIPEVQPEE
VLVISLGTGPQITPGMMSENEVLNMQLADGGQGDVPIDENKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPG
SGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQ
LTSPPSQTDSLLALFDPLSSNEGVSTVVRPKVHYARPSHPPPDPPILEGAVGGSEARLPN
FGCHALIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNRRAGNEDRELPMAS
SSAGAAVLAAASQSSSSSPSKDSSRGEIEDRKDSDDEKSDRNKPWWRKRFASAMPKAPIP
FRKKEKQEKDKDDMVPDRYATLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVN
YDSAEAIGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQGSAFSYRDAKKKLRLALCS
ADSVALPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSR
FDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFT
TVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQL
QDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLR
EAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFIPVLVFVL
IKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggacatccacacgctggcccaccacctgaagcaggagcggctgtacgtc
agctcggagaagcagctgatccagcggctcaacgccgacgtgctgaagacggcagagcgg
ctgtaccgcacggcctggatctccaaacagcagcgcatcaacctcgacaggctcatcatc
accagtgctgaagcttctcctgctgaatgttgccagcacgcgaaaatcttggaggacaca
cagtttgtggatgggtacaagcagttgggattccaggagactgcttacggagaattcctg
aacagactgagggagaaccccaggcttattgcgtcctgtctggttgctggagagaagctc
aaccaggacaacacccagagtgtcattcacaccgtcttcacctccatctatggcaactgc
atcatgcaggaggatgagagttacctgctgcaggtgctccgctacctgatcgagtttgag
ctgaaggaaagcgacaaccccaggcggctgctgagacgaggcacctgtgccttcagcatc
ttgttcaagcttttctctgaaggactcttttctgcaaaactttttcttactgctacctta
catgagccaatcatgcagcttctggttgaagatgaagaccacctggaaaccgatgcaaac
aagttaattgagagattctccccagtacagcaggaaaagttatttggagagaaaggcaca
gaaaagttcaagcagagagtccaagagatggttgactccaacgaggccaagctggtgacc
ctggtcaacaaattcattggctatctcaaacaaaacacgtactgctttcctcacagcctg
aggtggattgtgtcgcagatgtacaaaacactgtcctgtgtggacaggctggaggtgggc
gaggtcagagccatgtgcacagatcttcttctggcctgcttcatctgccctgccatcgtc
aaccccgagcagtacggcatcatttctgatgctcccatcaacgaggtggcaaggtttaat
ctgatgcaggttgggagacttctgcagcagctggcaatgacaggctctgaggagggagat
ccacgtacaaagagcaacctggctaaatttgacaaaagctgtgttgctgctttcctggac
gtggtgatcgacgggcgcgcggtcgagactcccccgatgtcggccgtgaacctgctggag
gggctgagccgcaccgtggtgtacatgacctacagccagctcactgccctggttggcttc
atgcggaacgtgatgtcaagcgatcaacttaaggaagatcggatggctttggaaaacttg
ctggcaaatttaccccagaacaagccagggaaaagcagcagccttgaaatgactccatat
aacaccccccagctttctcctgcaactactccagctaacaaaaagaaccgactgcccata
ggacagcagttggcagcgattactgcctgggatacctctgctaccaatctgtcagctcac
ataactctagtaaccccttttgccactcgaagcagaagtagatcaaacatgctaatggac
cagcacggagatcatgaaggatcctcccaggagactattccagaagttcagccagaagaa
gtgctggtgatttctttggggacaggtccacagattactccaggaatgatgtcagaaaat
gaggtgttaaatatgcagcttgcagatggcgggcaaggagatgtccccatcgacgagaac
aaactccatggtaaacctgataaaaccttgcgcttttccctctgcagtgataatctggaa
ggaatatctgaaggcccttccaatcgctccaactcggtgtcctccctggatctggagggg
gagtcggtgtcggagctgggcgcgggcccctccggcagcaacggcgttgaggctctgcag
ctgctggagcacgagcaagccacaactcaggataacctggatgacaagctccggaagttt
gaaatccgtgacatgatgggtttgactgatgacagagacatttcagaaactgtgagtgaa
acctggagcacagatgtcttgggaagcgactttgaccccaacatcgacgaggaccggctg
caggaaatcgcaggtgcagctgcagagaacatgctaggcagcttgctgtgtttgccaggt
tcaggatccgtgttgcttgatccctgcacaggttcaaccatatcagaaaccacaagtgag
gcgtggagtgtggaagtattaccaagtgattcagaagctccagatttaaagcaggaggaa
agactccaggagctggagagctgctctgggctgggtagcacgtctgatgacacagatgtg
agggaggtcagctctcggcccagcacccccggcctgagcgttgtgtcaggtattagtgca
acatctgaagatattcctaacaagattgaggatctcaggtctgaatgtagctctgacttc
gggggaaaagattctgtaacaagtcctgacatggatgaaacagcccatggagccagtcag
ttgacatctcctccttctcagacagattctttgcttgcattgtttgaccctctgtcctca
aatgagggtgtatcaactgtagtgaggcctaaagtgcactatgcaagaccctctcaccca
cctccagatccacccatcctggaaggagccgtgggaggcagcgaggcccggctgcccaac
ttcgggtgccacgctttgatcccgacggacctggaagccttcaagcagagacattcctac
ccggagaggctggtccgcagcaggagctccgacatcgtgtcctcggtgcggaggcccatg
agcgatcctggctggaacagacgtgctggcaatgaggacagggagctgcccatggcctcc
agcagcgccggggcagcggtgctggcggccgcctctcagtcgtcatcttcatctcccagc
aaggactcctccaggggagagattgaggatcggaaggacagtgatgatgagaagtctgac
aggaacaagccctggtggaggaaacgctttgcgtctgccatgcccaaagctcctattcca
tttaggaagaaagaaaaacaagaaaaagacaaagatgacatggtgcctgacagatatgca
acacttcaagatgatcccagcccaaggctcagtgcacaggcacaagctgctgaggacatt
ctggacaaatacaggaatgcaatcaagagaacgagtcccagtgaaggagccatcgtgaac
tacgacagtgcagaggcaattggggatggtgagagcatgcacgactccccacgggatgag
gctttgcagaacatgtctgcagacgacctcccagactctgcaagtcaagtagcacagcca
caaggttctgctttctcctatagggatgcaaagaagaaattgagattggctctttgttca
gcagattctgttgccctcccgatgctgacccattcaacaaggaatggtctcccagaccac
acagaccctgaagataatgaaatcgtgtgcttcttgaaagttcagctggctgaagccatc
aacctgcaggacaagaacctgatggcgcagctgcaggagacgatgcgctgcgtgagccgc
ttcgacaaccgcacctgccgcaagctgctggcctccatcgcagaggactacaggaaaaga
gctccatatattgcttatttaacgcgctgtcgccaaggcctgcagacgacacaggcgcac
ctggagaggctcttgcagagagtcctgcgagataaagaagtggccaacagatacttcacc
acagtctgtgtgaggttactgctggagagcaaggaaaagaaaataagggagttcattcaa
gatttccagaaactgacggcagcagatgataagacggcgcaagtggaggattttctgcag
ttcctgtacggggccatggctcaggatgccatctggcagaatgccagcgaggagcagctc
caggatgcacaattagccatcgagcgcagtgtgatgaatcgcattttcaaactggccttc
taccccaatcaggatggagacattctgcgtgaccaggtccttcacgagcacatacagagg
ttgtccaaagtagtgactgcaaaccacaaggcacttcagatacctgaggtgtatctccgg
gaggcgccctggccctcggcgcagtccgagatccgcaccatcagcgcttacaaaaccccc
cgggacaaggtgcagtgtatcctgaggatgtgctccaccatcatgaacctgctcagtctg
gccaacgaggattccgtacctggggcagatgattttattcctgttctggtctttgttctc
ataaaggcaaaccccccttgcctgctgtccactgtgcagtacatcagcagtttctatgcc
aactgcttgtctggagaggagtcgtactggtggatgcagttcacggcagccgtggagttc
atcaaaaccatcgatgatcgcaagtag
DBGET
integrated database retrieval system
