Taeniopygia guttata (zebra finch): 100230692
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Entry
100230692 CDS
T01082
Symbol
RNF115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100230692 (RNF115)
04121 Ubiquitin system [BR:
tgu04121
]
100230692 (RNF115)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100230692 (RNF115)
Membrane trafficking [BR:
tgu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100230692 (RNF115)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100230692 (RNF115)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
HypA
zf-Nse
zf-RING_16
DZR_2
zf-RING_Vps41
VPS18_RING_C
C1_2
zf-HC5HC2H
DZR
IBR_1
CoiA_N
zf-HC5HC2H_2
DUF7560
Rad50_zn_hook
U-box_ZFPL1
Motif
Other DBs
NCBI-GeneID:
100230692
NCBI-ProteinID:
XP_030147220
LinkDB
All DBs
Position
25:1725469..1733120
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AA seq
287 aa
AA seq
DB search
MAEAAAAVQQHRFFCHSCKGEVSPKLPEYTCPRCESGFIEEVTDDSSFFDSNSLDNSPSS
QFSELWDHLDHTMFFPDFRPFLSSSSLDGESREVERGPPNEFWGPGRPPRLPMPRRYRAR
GSSRPDRSPAIEGIIQQIFAGFFANSALPGSQHPFSWSGMLHSSPGDYAWGQSGLDAIVT
QLLGQLENTGPPPADKEKISSLPTVLVTQEQVDTGLECPVCKEDYAVAEQVRQLPCNHVF
HSSCIVPWLELHDTCPVCRKSLKGEDSTRQIPNPDPADSPVQESWTF
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggcggcggcggtgcagcagcaccggttcttctgccacagctgcaaggga
gaggtcagccccaagctgccggaatacacctgcccccgttgtgagtctggcttcatcgag
gaagttactgatgattccagtttttttgacagcaattccctggacaacagcccctcctca
caattctcagagctttgggaccacctggatcacaccatgttcttcccggatttccgaccc
ttcctgagcagcagctccttggatggagagagcagagaggtggagaggggtcccccaaac
gagttttggggtcccgggcgtcccccacggctgccgatgccgcggaggtaccgggcccgc
ggcagctcccgcccggatcgatcgccggccatcgaggggataatccagcagatctttgct
ggcttttttgccaactcagcccttcctggctcccagcaccccttctcctggagcgggatg
ctgcactccagccccggcgattacgcgtggggacagagcggcctcgacgccatcgtcacc
cagctcctggggcagctggagaacacgggaccacctccagcagacaaggagaagatctcc
tcgctcccaacagtgctggtgacacaggaacaagttgacacaggcctggagtgcccggtg
tgcaaggaggattacgccgtggccgagcaggtccggcagctcccctgcaaccacgtcttc
cacagcagctgcatcgtgccctggctggagctgcacgacacgtgtccagtctgcaggaag
agtttaaagggagaagattccacccggcaaatcccgaatcccgaccctgccgacagccca
gtgcaggagagttggactttctga
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