Taeniopygia guttata (zebra finch): 100230694
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Entry
100230694 CDS
T01082
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X2
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100230694 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100230694 (DCP1B)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100230694 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
100230694 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
100230694
NCBI-ProteinID:
XP_004174337
Ensembl:
ENSTGUG00000012575
LinkDB
All DBs
Position
1A:68377183..68417968
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AA seq
596 aa
AA seq
DB search
MAAALGRGLDISLAALRQHDPYISGIVDVASQVALYTFGHRASQWEKTDVEGTLFVYTRS
ASPRHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEECQRIAE
LMKNLTQQEQFKAQQGTGTGVSPMIMNSANNKEVDILRMLTKAKDEYTKCKTCSEPKQIT
SSSAIYNNPNLIKPIPVKPSENQHQRISQQSKNVDPEPQHLSLTALFGKQDKADGAEALP
KQHQEKLPVRQGVVRSLSYEEPSRHSPCAEKQLCPAIQKLMVRGTELHPLAEFPESRLCE
NGSVGETFTGLFQPVTSHGVATSHGAQDTAGTQSLLQKLQSQSGSVAKMEPSATGPVNST
ASVFSRTPAPVGAPTAPVNNMNQPPLVYFNGSLPGQTLEAQTLGKEQSKLPRQPLPLSGN
QAANSGVISPQELLKKLQIVQQEQQLHVSSRPTLAAKFPVVTQNTSTLKPLDSWIEKAPG
TEKQSTLFQVMSPQRIPATVTPTLLMSPMVFSQPTPAPPKAAESLAAANPEATASSASLL
LPLPAPEPGVASSTSITKMQLQETLLHLIQNDDNFLNIIYEAYLFSVRKAAMKKPM
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgctgggccgggggctggacatcagcctggcggcgctgcggcagcacgac
ccctacatcagcggcatcgtggacgtggccagccaggtggcgctctacaccttcggccac
cgcgccagccagtgggagaagacagatgtggagggaacgctgtttgtttacacgagatca
gcttctccaaggcacggtttcacaattatgaacagactgagcatggaaaatcgaacagaa
cccattactaaagacctcgatttccagctccaggacccttttctgctctacagaaatgcc
agattgtccatatatgggatttggttttatgataaggaagaatgccaaagaattgcagag
ctcatgaaaaacctaactcagcaggaacaattcaaagcacagcagggcacaggaacaggg
gtgtcccccatgatcatgaattctgctaataacaaagaagtggatatcttacggatgctt
accaaggccaaagatgagtataccaagtgtaagacctgctcagagcccaaacaaataacc
agttcctctgcaatctataacaaccccaacctaatcaaacccattccagtgaagccgagt
gagaatcagcatcagcgaatctcccagcagagcaagaacgtggatcctgaaccgcagcac
ttgtctttgacagcgctgtttggcaaacaggacaaggcagacggcgcagaagcactccct
aagcagcaccaggagaagctccctgtcaggcagggtgtggttcgctcactgtcctacgag
gagcccagcaggcactccccctgtgcagagaagcagctgtgccctgccatccagaagctg
atggtgcggggcacagagctgcatcccctggccgagttcccggagagccgcctctgtgaa
aatggcagcgtgggggagactttcacaggcctcttccagcctgtgacttcccacggcgtt
gccacgtctcacggagctcaggacactgctggcactcagagcctgctgcagaagttgcaa
agtcagtcagggtcggtggctaaaatggagcccagtgccacaggacctgtgaactcgaca
gcttccgtgttcagcaggactcctgctcctgttggagcaccaactgcaccagtaaataac
atgaaccagccccctttggtgtatttcaatgggtccctaccaggccagactttagaggct
cagacacttggtaaagaacaatccaaacttccccgtcagccgcttcctctctctggcaat
caagcagccaattctggggtgatttcacctcaagaattattgaaaaaactccagatagtg
caacaagaacagcagctccatgtatccagcagaccaacgttggcagctaagttcccagtt
gttacacagaacaccagtaccctgaaaccactggattcctggatagaaaaggctccaggc
acagaaaaacagagcactctcttccaggtcatgtcccctcagcgcattcctgccaccgtg
acccccacgctgctgatgtcccccatggtgttcagccagcccacgcccgctccacccaaa
gctgctgagagcttggcagcagccaaccccgaggccactgccagctcggccagcctgctc
ctgcccctgccagccccagagccaggcgtggccagcagcacctccatcaccaagatgcag
ctgcaggaaacactcctacacctcatccagaatgatgacaacttcttaaacattatttat
gaagcatatctcttcagtgtgcggaaggcggcgatgaaaaagcctatgtga
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