Taeniopygia guttata (zebra finch): 100230716
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Entry
100230716 CDS
T01082
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100230716 (SNTB1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
100230716
NCBI-ProteinID:
XP_030122484
Ensembl:
ENSTGUG00000012405
UniProt:
H0ZQ85
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Position
2:complement(139753913..139865327)
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AA seq
522 aa
AA seq
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MAVAAAGGGGGGRAQRSGWLEVLVRERWHKVLANLGGEALVLSGEERPDGAAHNGLGGDG
TACRGAEGGGGPAAARTAFTDPPEQVPEAISNKKRCVKVLKQEMGGLGISIKGGKENKMP
ILISKIFKGLAADQTQALYVGDAILAVNGTDLRDATHDEAVQALKRAGKEVLLEVKYMRE
ATPYVKKGSPVSEIGWETPPPESPRLGCASADPMSQLSLSIHRDRKTIPLKMCYVTRNMT
VSDPENRIIEVHSPDAKHTVVLRSKDSATAQAWFNAIHSSVNELIPRVIAEVRDQLGKTG
IAGSREIRHLGWLAEKVPGDNEKHWKPVLVVLTEKDLLIYESMPRIKEAWFSPVHTYPLL
ATRLVHSGPGKGSPKSGVDLSFATRTGTRQGIETHLFRTETSRDLSLWTRSVVQGCHNSA
ELITEITTACTYKSQECRLTIHYEHGFSLTTEPQDGAFSKTIAQYPYEKLKMSSDDGIRM
LYLDFGEKDGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcgggcggcggcgggggcggccgggcgcagcgcagcggctggctg
gaagttttggtgcgggagcgctggcacaaagtgctggccaacttgggcggcgaggcgctg
gtgctgagcggcgaggagcgccccgacggcgcggcgcacaacgggctgggcggcgatggg
acggcgtgccgcggggccgagggcggcggggggccggcggcggcgcgcaccgccttcacc
gacccccccgagcaggtgcccgaggccatctccaacaagaagcggtgcgtgaaggtgctg
aagcaggagatgggcggactgggcatcagcatcaaggggggcaaggaaaacaagatgccc
atcctcatcagcaagatcttcaaggggctggcggccgaccagacccaggctctctacgtg
ggcgatgccatcctggccgtgaacggcactgacctgcgggatgccactcacgacgaggcg
gtgcaggcgctcaaacgggccggcaaggaggtgctgctggaagtgaaatacatgagagaa
gcgaccccctatgtgaagaagggctcccctgtgtcggagatcgggtgggagacgcctccc
cccgagtctccgcgcctgggctgcgcctctgctgacccgatgtcgcagctttcgctctcc
atccacagggacaggaagacaattcccctcaagatgtgctacgtgacacgcaacatgaca
gtgtcagatcccgaaaacagaattattgaagttcattcacctgatgccaagcacaccgtg
gtgctcaggagtaaggattcagctacagcccaggcctggttcaatgccatccactccagt
gtcaatgagctcatccccagggtgattgcagaggtcagagaccagctgggtaaaacaggg
attgctggaagtcgagagattaggcatctaggctggcttgcagaaaaggtgccaggagac
aacgagaagcactggaagccagtgttagtggttttgacagagaaagacctcttaatatat
gagagcatgccacggataaaggaagcctggttcagccctgtgcatacctaccccctgctc
gccaccaggttggttcattctggcccaggaaaaggctcaccgaagtcaggggtggatttg
tcgtttgcaacccgtaccggtacaagacaagggatcgaaactcatttgttcaggactgag
accagtcgagacctctcattgtggacgaggagtgtagtgcagggctgccacaactctgca
gagctcatcacagaaatcaccacagcttgcacatacaaaagccaggagtgccgcttgacc
atccactatgaacacggattctctcttacaaccgaaccacaagacggtgccttctccaag
acaattgcacaatatccctacgaaaaactgaaaatgtcctcagatgatggaataaggatg
ctttatttagactttggagaaaaagatggagaaattcaactggaccttcattcctgtcca
aaaccaattgttttcatcattcattccttcctgtcagcaaagatcacgagactgggcttg
gtggcataa
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