Taeniopygia guttata (zebra finch): 100230787
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Entry
100230787 CDS
T01082
Symbol
NYX
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tgu00535
]
100230787 (NYX)
Proteoglycans [BR:
tgu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
100230787 (NYX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
LRRCT_2
DUF5886
Herpes_glycoH_C
Motif
Other DBs
NCBI-GeneID:
100230787
NCBI-ProteinID:
XP_030138706
Ensembl:
ENSTGUG00000006438
LinkDB
All DBs
Position
1:106958304..106967275
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AA seq
473 aa
AA seq
DB search
MFVIILNVILWVPQVHGVWACVRSCPPSCVCTPERSCSVLCDRAGLGQIPSEFPCEASSI
NLDKNSIKFLSERAFGTLPSLKSLSLNHNNISFITPGAFKGLPSLTELKMAHNEYIRYLH
TRTFTALRRLVRLDLADCNLFNIPDRIFIELPALQELFCFQNNFRRIPGAIRGMENLTHV
YLERNRIEAVAYNSLQGLTKLKYLNLQDNKINVIHERAFQGCQRMEYLYLNDNLISELPE
NSFDGLRHLKMLNLGGNFLRNISNTWFRDLGELEFLYLDRNRISYIEEGAFENLTSLVAL
HLNSNNLTTLPFSVFEPVYFLGRLYLFRNPWECDCRIEWLKEWMENYRLVRDIPCASPSS
VAGIDLMDVLFERSPEGYCLDPEELNITAERPTPSEEPWSTTESKFNSLISKLLLQMGLP
EEVANATEVYSNSTQPDGQTEGVSSGMGGDRTKADSSSLYLPALLTAIVLLCK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcatcattctaaatgtgatcctttgggtgccacaggtccatggggtgtgggcc
tgcgtgcgctcctgccctcccagctgcgtgtgcaccccggagaggagctgctccgtgctc
tgtgaccgggccgggctggggcagatccccagcgagttcccctgcgaagcctcttccatc
aacctggataaaaacagcatcaagttcctgtctgagagggccttcgggacgctgccttcc
ctcaagtccctgtcactcaaccacaacaacatctccttcatcacgccaggggcgttcaag
gggctgcccagcctgacggagctgaagatggcccacaacgagtacattcgctatctgcac
actcggaccttcaccgcgctccggcgcctggtgaggctggacctggccgactgcaacctc
ttcaacatcccagacaggatcttcatcgagctgcctgctctgcaggagctcttctgcttc
cagaacaacttccgaaggattccaggcgccatcaggggcatggagaacttgacccatgtg
tacctggagagaaacaggatcgaagcggtggcctataactccctgcagggcctgaccaag
ctgaaatacctgaatctgcaggacaacaagataaatgtcatccacgagcgagcttttcag
ggctgccagaggatggagtacctgtacctgaatgacaacttgatcagcgagcttccagaa
aactcctttgatggcctgaggcacctgaagatgctgaacctgggggggaattttctcagg
aacatttccaacacctggttccgggatttgggggagctggagttcctctacctggaccgc
aacaggatcagctacatcgaggagggggcttttgagaacctcaccagcctggtggctctg
cacttgaacagcaacaacctgacgacgctgcccttctccgtcttcgagcccgtgtacttc
ctgggccgcctgtacctcttccgcaacccctgggagtgcgactgccgcatcgagtggctc
aaggagtggatggagaactacaggctggtcagggatattccgtgtgcctccccctcctcg
gtggcggggattgatctgatggacgtgctcttcgagaggtctcccgagggttactgtctc
gacccggaggagctgaacatcacggccgagcggccgaccccaagcgaggagccttggtcc
accacagagagcaagttcaacagccttatctccaaactcttgctccagatgggccttcct
gaagaggtggcaaatgccactgaggtgtacagtaacagcacacaaccagatggacagact
gaaggggtttcttctggcatggggggagacaggaccaaggctgactcctcttccttgtac
ctcccagcgcttctgacagcgattgttctgctgtgcaaatag
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