Taeniopygia guttata (zebra finch): 100230947
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Entry
100230947 CDS
T01082
Symbol
ITGB1
Name
(RefSeq) integrin beta-1 isoform X4
KO
K05719
integrin beta 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03271
Virion - Rotavirus
tgu04145
Phagosome
tgu04510
Focal adhesion
tgu04512
ECM-receptor interaction
tgu04514
Cell adhesion molecules
tgu04530
Tight junction
tgu04810
Regulation of actin cytoskeleton
tgu04820
Cytoskeleton in muscle cells
tgu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
100230947 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100230947 (ITGB1)
04514 Cell adhesion molecules
100230947 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100230947 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100230947 (ITGB1)
04530 Tight junction
100230947 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100230947 (ITGB1)
04810 Regulation of actin cytoskeleton
100230947 (ITGB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100230947 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100230947 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgu04147
]
100230947 (ITGB1)
04515 Cell adhesion molecules [BR:
tgu04515
]
100230947 (ITGB1)
04090 CD molecules [BR:
tgu04090
]
100230947 (ITGB1)
Membrane trafficking [BR:
tgu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
100230947 (ITGB1)
Exosome [BR:
tgu04147
]
Exosomal proteins
Proteins found in most exosomes
100230947 (ITGB1)
Cell adhesion molecules [BR:
tgu04515
]
Integrins
Integrin beta subunits
100230947 (ITGB1)
CD molecules [BR:
tgu04090
]
Proteins
100230947 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
100230947
NCBI-ProteinID:
XP_030120227
Ensembl:
ENSTGUG00000000968
UniProt:
H0YRV7
LinkDB
All DBs
Position
2:14245970..14289180
Genome browser
AA seq
810 aa
AA seq
DB search
MQAQKCETNFKWLMCAGILCCLIWNGCAQQGGSDCIKANAKSCGECIQAGPNCGWCKKTD
FLQEGEPTSARCDDLAALKSKGCPMEDIENPRGSKQVLENREVTNRKKGAAEKLKPEAIT
QIQPQKLSLHLRVGEPQTFSLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTALMLE
MEKITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCTSPFSYKNVLSLTSEGNKF
NELVGKQHISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGG
IVLPNDGKCHLENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQAVYKELKNLI
PKSAVGTLSSNSSNVIQLIIDAYNSLSSEVILENTKLPKGVTISYKSFCKNGVNDTQEDG
RKCSNISIGDEVRFEINITANECPKKEQNETIKIKPLGFTEEVEINLQFICECQCQSEGE
PNSPACHAGNGTFECGACRCNEGRIGRLCECSTDEVNSEDMDAYCRRENSTEICSNNGEC
ICGQCVCKKRENTNEVYSGKYCECDNFNCDRSNGLICGGNGICKCRVCECFPNFTGSACD
CSLDTTPCMASNGQICNGRGTCECGTCNCTDPKFQGPTCEMCQTCLGVCAEHKDCVQCRA
FDKGEKKETCSQECMHFNMTRVESRDKLPQPGQPDPLSHCKEKDVDDCWFYFTYSVNSNG
EANVHVVETPECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKM
NAKWDTQENPIYKSPINNFKNPNYGRKAGL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcccaaaagtgtgagactaatttcaaatggctcatgtgtgctggcatcctctgt
tgcttaatatggaatggatgtgcccagcaaggtggaagcgactgcataaaagcaaatgca
aagtcatgtggggaatgtatacaagcaggaccaaactgtggctggtgtaaaaaaacagac
tttttgcaagaaggagagccaacatctgcccggtgtgatgacttggcagcactgaagagt
aaaggctgccctatggaagacatagagaatcccaggggcagcaagcaggtgctcgaaaac
agagaagtaacaaatcgtaagaaaggtgctgcagagaagctgaaaccagaagccattaca
cagatccagccacagaaattatcactgcatctaagagtcggggagccccagacattttca
ttaaaattcaagagagctgaagactaccccattgacctttattatcttatggacctctcc
tattctatgaaagatgatttagagaatgtgaaaagtcttggaacggctctgatgttagag
atggaaaaaataacttcagactttcggattggctttggctcttttgtggagaaaactgtg
atgccttacataagtacaacacctgccaaactcagaaatccttgtacaggtgaccagaac
tgcacaagtccatttagctataaaaatgtgctcagccttaccagtgaaggaaacaagttc
aatgaacttgtaggtaaacagcacatttctgggaacttagattctcctgaaggtggattt
gatgcaataatgcaggttgcagtttgtggggaacaaattggctggaggaatgttacaaga
ctattagtgttttccacggatgctggattccactttgcaggagatggtaaacttggtgga
attgttctaccgaatgatgggaaatgtcatctggaaaataatgtgtatacaatgagccac
tattacgattatccctctattgctcatctggtacagaaacttagtgagaacaatattcag
acaatttttgctgttactgaagagtttcaggcagtctataaggaactgaaaaatctgata
ccgaaatcagcagtgggaacattgtcttcaaattccagcaatgtgattcagctgatcatt
gatgcatacaattccctttcttcagaggttatcctggaaaatactaagctaccaaaagga
gtgacaatcagttacaagtctttctgcaagaatggagtgaatgacacacaagaagatgga
aggaagtgttctaacatttcaattggagatgaggttagatttgagattaatataacagct
aatgaatgtccaaagaaagaacaaaatgaaacaattaaaattaaaccactgggattcact
gaagaagttgaaattaatctccagttcatctgtgagtgtcagtgccaaagtgaaggagaa
cctaatagtccagcctgccatgcaggaaatggaacatttgaatgtggtgcgtgcagatgt
aatgaaggacgtattggaagactatgtgaatgtagcacagatgaagtaaatagtgaggat
atggatgcttactgcaggagggagaacagcacagaaatctgcagtaacaatggagaatgc
atttgtggacaatgtgtgtgcaagaaaagggagaataccaatgaggtgtattctggcaaa
tactgtgaatgtgacaacttcaattgtgatcgatcaaatggtttaatctgtggaggaaat
gggatctgcaagtgccgagtgtgtgagtgtttccccaacttcactggcagcgcctgcgat
tgttccttggatactacaccatgtatggcatctaatgggcagatttgcaatggaagagga
acctgtgaatgtggcacctgtaactgtacagatcccaaattccaaggccccacgtgtgaa
atgtgtcagacttgcctcggtgtctgtgcagagcacaaggactgtgttcagtgcagagct
ttcgataagggggagaagaaggagacgtgttcccaggaatgtatgcacttcaacatgacg
cgcgtggagagccgggacaagctgccgcagcccggccagcccgaccccctgtcccactgc
aaagagaaggacgttgatgactgctggttctacttcacttactctgtcaactccaatggt
gaagccaatgtccacgtggtggagaccccagagtgccccagcggtcctgacatcattccc
attgtagctggtgtggttgctggaattgttcttattggacttgcattattattgatctgg
aaactactaatgatcattcatgacagaagagaatttgctaaatttgaaaaggagaagatg
aatgccaagtgggatacgcaagaaaatccaatatacaagagccctattaacaatttcaag
aatccaaactatggacgtaaagctggtctctaa
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