Taeniopygia guttata (zebra finch): 100231096
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Entry
100231096 CDS
T01082
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100231096 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tgu04147
]
100231096 (COPB2)
Membrane trafficking [BR:
tgu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100231096 (COPB2)
Exosome [BR:
tgu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100231096 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
100231096
NCBI-ProteinID:
XP_030136654
Ensembl:
ENSTGUG00000005180
LinkDB
All DBs
Position
9:620040..634492
Genome browser
AA seq
974 aa
AA seq
DB search
MSRHATGAPRSREAAGRRGGAVARAEPRKLHVGDRGRSGAGAGAGPEPERGRRAAARHSG
AMPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKNFEVCDLP
VRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSD
DMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNF
TLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHP
ELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKL
GREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQ
HNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFK
EKKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCI
ATEESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSS
VNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVM
RRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQ
LAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGA
EKDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSK
VNQKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLTDLRPAREYPLVTPNEERNLLEEA
KGFEPSGIMTSQKKAEEPVPSPKQEVMKTVVQNSDNLPARDQKTLLDLEDDLDNLDLEDI
DTTDINLDEEILDE
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcatgccacgggagcgcctcgctctcgcgaggctgcggggcgccgcggcggc
gctgtggcgagagcggagccccggaagctccacgtcggtgatcggggccggagcggggcc
ggggccggagcggggccggagccggagcggggacgacgggcggctgctcggcacagcggg
gccatgcctctgcgactggacatcaagcggaagctgacggcccgctctgaccgtgtgaag
agcgtggacctgcatcccacggagccatggatgctggccagcctctacaacggcagtgtc
tgtgtttggaaccatgagacacagactttggtgaagaattttgaagtgtgtgacctgcct
gtgagagctgccaagttcgtggcaaggaagaactgggttgttactggagctgatgacatg
cagatcagagtttttaattacaacaccctggaaagagttcacatgtttgaggcccattcc
gactacatccggtgcattgcagtgcaccccacgcagcccttcatcctcacgagcagtgat
gacatgctgatcaaactctgggactgggacaagaaatggtcttgttctcaggtgtttgaa
ggacacacccattacgtcatgcagattgtcataaacccaaaagacaataaccagtttgcc
agtgcttctttggataggacaattaaggtgtggcagcttggatcatcctctcccaatttc
accttggaaggccatgagaaaggagtgaactgcattgactattacagtggtggggacaag
ccatacctcatttctggggcagatgaccgcctggtgaagatctgggactaccagaataaa
acttgtgttcagacactagagggccacgctcagaacgtgtcgtgtgtcagcttccatccg
gagctgcccatcatcatcactggctctgaagatggcacggtgcggatctggcactccagc
acttaccgcctggagagcaccctgaactacggcatggagagggtgtggtgtgtggccagc
ctgaggggctccaacaacgtggctttgggctatgatgaaggcagcatcattgttaagctt
ggtcgtgaagaacctgccatgtccatggatgcaaatggaaaaattatttgggctaaacat
tccgaagtccaacaggctaacttgaaagctatgggagatgctgaaatcaaagatggagag
aggttgccactggctgtgaaggatatgggcagctgtgaaatctatcctcagacgatccag
cacaaccctaatggacggttcgtggtggtgtgtggtgatggtgaatacatcatctataca
gccatggctctgaggaacaagagctttggttctgcacaggagtttgtgtgggcacatgac
tcttcagagtatgcaatcagggagagcaacagtgttgtaaagatatttaaaaatttcaaa
gagaagaagtccttcaagcccgattttggagccgaaggcatctatggtggctttctgttg
ggagtcagatctgtcaatggcctggcattctatgactgggagaatacagagctgattcgc
aggattgaaatccagcccaaacatattttctggtctgactcgggtgagcttgtgtgcatt
gctacggaagagtcattcttcattctcaagtacctgtcagaaaaggtggcagcagcccaa
gaaacacatgaaggtgtcactgaagatggaattgaagatgcctttgaggttcttggtgag
atccaggagattgtgaaaacaggtctgtgggtcggtgactgctttatttacaccagttct
gtgaacagactcaactactacgttggaggagagattgtcaccattgcccacctggacaga
acaatgtatctcctggggtacatccccaaggacaacaggctgtatctgggtgataaagag
ctaaacattgttagttactccctgctggtctcagtgcttgaatatcaaaccgctgtgatg
aggagagatttcagcatggctgacaaagttcttcccacaatcccaaaagaacagagaacc
agggtcgcacattttcttgaaaaacagggcttcaaacaacaagctcttgcagtatctaca
gatccagagcatcgttttgaacttgctcttcagcttggagaattaaaaatagcctatcag
cttgcagtggaagcagagtcagaacagaagtggaagcagcttgcagagcttgccatcagt
aaatgccagtttggcttagcccaggagtgtctccaccatgcccaagactacggagggctg
ctgctcctggccacagcttcagggaatgccagcatggtgaacaagttggccgaaggtgca
gaaaaggatggcaagaataatgtagcatttatgagctacttcctgcagggaaagcttgat
tcctgtttggagctcctgatcaaaactgggcgtctccctgaagctgctttccttgcacgg
acgtatttgccgagccaggtttcaagggttgttaaactctggcgggagaacctctctaaa
gtcaatcaaaaggctgctgagtcccttgctgatcctacagaatatgaaaatcttttccct
ggattaaaggaagcttttgttgctgaagagtacgttaagcaaagtcttactgacttgcga
ccagccagggaatatccccttgtcactccaaacgaagaaagaaacttacttgaagaagca
aaaggatttgaaccctctggaataatgacatctcagaagaaggctgaagaaccagttccc
tctcctaaacaggaagtgatgaagacagttgtgcagaattctgataaccttccagcaaga
gatcaaaagacactgctggacctggaagatgacttagataacttggatctggaggatatt
gataccacagatatcaatctggatgaagagatcttagatgagtga
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