Taeniopygia guttata (zebra finch): 100231158
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Entry
100231158 CDS
T01082
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03420
Nucleotide excision repair
tgu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100231158 (ERCC4)
03460 Fanconi anemia pathway
100231158 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgu03032
]
100231158 (ERCC4)
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100231158 (ERCC4)
DNA replication proteins [BR:
tgu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100231158 (ERCC4)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
100231158 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
DUF4110
Motif
Other DBs
NCBI-GeneID:
100231158
NCBI-ProteinID:
XP_030140517
Ensembl:
ENSTGUG00000005055
LinkDB
All DBs
Position
14:9731397..9747263
Genome browser
AA seq
904 aa
AA seq
DB search
MAALLEHESQIFLELFHRDGLVVCARGLGIDRLLLRFLRLYCEPTSLVLVLNTSPAEEEY
FIDQLRSDGVVHLPRRVTNEIANNTRYEFYTQGGVIFATSRILVVDFLTDRIPANLITGI
LVYKAHKIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCHVERVMKNLFVGKLY
LWPRFHIAVHSFLEKHKPEVVEIHVAMTPAMLAIQTAILDILNACLKELKRYNPTLEVED
LSLENAIAKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVTFLNLLE
SLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADEKLNQKGKGSGSEKRDVKKENEL
KRELVLESNPKWEALREVLKEIENENKNSDNLGGPGQVLICASDDRACAQLREYIIAGAE
AFLTRLYNKTFGKDEKAGEVWIKDRNTINSKGNAKPDTGPQAKKAKLTASKQNKQKKQQN
RTLIEMIGKTEEEKREEVEVEDNKELSGSQEGNTEESIPEDFDLNLPSDCYYGIFKDPLT
IIHPLQGCGDPYALTRVLQEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYFLIYGG
STEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLLRDARPASVSADTRKA
GGQEQKGVQQTIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSISDL
IGSLNNGRLYAQCVSMCRYYKRPVLLIEFDPNKPFSLIPRGSLQPEISSNDVTSKLTLLT
LHFPKLRILWCPSPHATAELFEELKQNHPQPDAETAMSVTADSEILPESDKYNPGPQDFL
LKMPGVNAKNCRALMTHVKSIAELVTLSKDELSKILGNAANATQLFDFIHLTYAEALAKG
KSKT
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctggagcacgagagtcagatcttcctggagctgttccaccgcgacggg
ctcgtcgtgtgcgcccgcgggctcggcatcgaccgcctgttgctgcgcttcctgcgcctc
tactgcgagcccaccagcctcgtgctcgtgctcaacaccagccccgccgaggaggagtat
tttattgatcagctgaggtcagatggagttgttcatctccctcgacgtgttaccaatgaa
attgcaaataacactcgatatgaattttatacacaaggaggagtcatctttgcaacaagt
cggatccttgtggtagatttccttactgacagaattcctgccaatctcattaccggcatt
ttggtgtacaaagcacacaaaatcattgaatcctgtcaggaagcattcatcttgcgactt
tatcgccagaagaacaagcaaggcttcattaaagcttttacagataatgcagttgcattt
aacactggcttctgtcatgtggaaagagtgatgaaaaatctttttgttgggaagctttat
ctgtggccaagatttcatatagcagtacactcgtttttagagaagcataaacctgaagtg
gtggaaatacacgtggcaatgacccctgctatgcttgctatccagactgcaatcctggac
attctgaatgcatgtctgaaggagctcaaacgttacaatccaactcttgaagtagaagat
ctatctttagagaatgctattgctaaaccttttgacaagacaatacgtcactatttagat
cctctctggcatcagcttggagctaagacaaagtctttggtccaggatttgaagatccta
cgtactttgctactgtatctaacccagtatgattgtgtcactttccttaatctcctggag
tcactgaaagcaagtgaaaaagcttttggtgagaattcaggctggctgttccttgactcc
agtacttcaatgtttgtgaatgcccgagctcgagtttatcgcattgcagatgagaaactg
aatcagaaaggcaaaggctcaggctctgaaaaacgtgatgtaaagaaggaaaatgaactg
aaaagggaattggttctggaaagtaacccaaaatgggaagctttgagagaagtactgaaa
gagattgaaaatgagaataagaacagtgacaaccttggtggtccagggcaagtgctcatt
tgtgccagtgatgaccgagcctgtgcacagctcagggagtatattattgctggagcagaa
gcttttttaacaagactatataacaaaaccttcggaaaggacgagaaagctggagaagtt
tggattaaggacagaaacaccatcaattccaaaggaaatgccaaaccagacacagggcct
caagcaaaaaaagccaaactgacagcttcaaaacaaaataaacagaagaagcagcaaaat
cggactctaatcgaaatgatagggaaaactgaggaggaaaagagagaagaggttgaggtg
gaagacaacaaagaattaagtggtagccaagaaggcaacactgaagagagtattcctgaa
gattttgatttgaatttgccctcagattgttactatgggattttcaaggacccactgaca
attatccacccgctgcaggggtgtggggatccctacgcgctcactcgggtgctgcaggaa
gtagaacccagatatgttgtgttgtacgatgcagaactcacttttgttcggcagctggaa
atctacaaggcaagcaggcctgggaagcctttgagagtttatttcctcatatatgggggc
tccacggaagagcagcgctacctcacagctctgaggaaagagaaggaggccttcgaaaaa
ctcattcgagagaaggctagcatggttgttcctgaagaaagagaaggaagagatgaaaca
aacttagacctcctcagagatgctagacctgcttctgtctctgctgacacacgcaaagca
ggtggacaggaacagaagggtgttcagcaaaccataatcgtggatatgcgggaattccgt
agtgagcttccatcactgatccatcgccgtgggatcgacattgagcccgtgactctggaa
gttggggattatattctaacccctgacatctgcgtggagcggaagagcatcagtgatctg
ataggctccttaaacaatggcaggctgtacgcacagtgcgtgtccatgtgccgctactac
aagcggccggttctcctcattgaatttgatcctaacaaacccttctccttgatcccacga
ggctctttacagccagaaatttccagcaatgatgttacctctaaactaacccttctcaca
ctgcacttcccaaagttacgaatcctgtggtgtccctctccccacgctactgctgaactc
tttgaagagttgaaacaaaaccatccccaacccgacgcagaaacagcgatgagtgtcacc
gcagattctgaaattctccccgaatcagacaagtacaaccctgggcctcaggacttcctg
ctaaaaatgccaggggttaatgcaaagaactgccgtgccttaatgacccacgttaaaagc
attgcagagctggtgacactgtccaaggatgagctatccaagattttgggtaatgctgcc
aatgccacacaactctttgactttattcacctgacctatgcagaggcactagccaaagga
aaaagcaaaacatga
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