Taeniopygia guttata (zebra finch): 100231497
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Entry
100231497 CDS
T01082
Symbol
PTPRT
Name
(RefSeq) receptor-type tyrosine-protein phosphatase T isoform X1
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tgu01009
]
100231497 (PTPRT)
Enzymes [BR:
tgu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
100231497 (PTPRT)
Protein phosphatases and associated proteins [BR:
tgu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
100231497 (PTPRT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
PTPlike_phytase
Y_phosphatase3
Pur_ac_phosph_N
PTP_tm
ig
Ig_3
TM_ErbB1
PTP-NADK
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
100231497
NCBI-ProteinID:
XP_030144556
LinkDB
All DBs
Position
20:3520961..3981697
Genome browser
AA seq
1519 aa
AA seq
DB search
MTGVAAIVFFLQLLPRADGQVFPGGCSFDEHYSNCGYSVALGTNGFTWEQINTWEKPTMD
PAVPTGSFMMVNSSGRASGQKAHLLLPTLKENDTHCIDFHYYLSSRDRSSPGSLNVYVKV
NGGPQGNPIWNVSGVVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGYIAVDEVRVLA
HPCRKAPHFLRLQNVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHR
RFSATVSVADTSQRSISKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAVGATYLW
IKPNANSIIGDGPIILKEVEYRTTTGNWAETHIVDSPNYKLWHLDPDVEYEIRVLLTRPG
EGGTGPPGPPLTTRTKCADPVHGPQNVEVVDIRSRQLTLQWEPFGYAVTRCHSYNLTVHY
QYVFNQQKFEAEELIQTSSHYTLRGLRPFMTIRLRLALSNPEGKMESEELVVQTEEDVPG
PVPLESIQGGPFEEKIYVQWKPPNETNGIITLYEITYKAVGSLDPSADLSSQRGKVFKLR
NETHHLFVGLYPGTTYSFTIKASTVKGFGPPITTRIATKISAPSMPEYDTDSPLNETDTT
ITVMLKPAQSRGAPVSVYQLVVKEEKLQKARRAADIIECFSVPVSYKNASSLDSPHYFAA
ELKPINLPVTQPFTVGDNKTYNGYWNAPLSPLKSYSIYFQALSKANGETKINCVRLATKA
VIGRQQATTRNPPSLLSTGASTQNSNAVEPEKQVDSTVKMAGVIAGLLMFVIILLGAMLT
IKRRIFCSSDWLSIFRRNAYSYSYYLHSSQCFRGLSVFYRTRKLAKKQKETQTSTQREMG
PVATSDKTSTKLSAVHNEEAFSSSCQDVNGFTSPSPCSFSVQSKTLQSKSMLNSYYSVSS
DTVPSTTLLDSSHGELAQPTLTIQTHPYRSCEPVEMSYPRGQFQPAIRVADLLQHITQMK
RGQGYGFKEEYEALPEGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLQLLDGDPHSDY
INANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASVVMVTNLVEVGRVKCVRYWP
DDTEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIREIRQFHFTSWPDHGVPCYATGL
LGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDIMLDMAENEGVVDIFNCVRELRSQ
RVNLVQTEEQYVFVHDAILEACLCGNTAIPVCEFRSIYYNISRLDPQTNSSQIKDEFQTL
NIVTPRVRPEDCSIGLLPRNHDKNRCMDVLPLDRCLPFLISVDGESSNYINAALMDSHKQ
PAAFIVTQHPLPNTITDFWRLVFDYNCSSVVMLNEMDAAQLCMQYWPEKTSCCYGPIQVE
FVSADIDEDIINRIFRICNMARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEK
WQEQYDGRDGRTVVHCLNGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVE
SLEQYKFVYEVALEYLSSF
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgtcgccgcgatcgtctttttcctgcagctcttgcccagggcggacggacag
gtcttcccaggtggttgttcatttgatgagcactacagtaattgtggttatagcgtcgcc
ttgggaaccaatggatttacctgggagcagatcaatacctgggaaaagccaacaatggat
cctgctgtcccaactggctccttcatgatggtgaacagctctgggcgagcatcagggcag
aaagctcacctgctgctgcccacgctgaaggagaatgacacccactgcatcgacttccac
tattacctgtccagccgggaccgctccagccccggctccctcaacgtctacgtcaaggtc
aacgggggcccccagggcaaccccatctggaacgtgtcaggggtggtgaccgaaggctgg
gtgaaggcagagctggccatcagcaccttctggccacatttctatcaggtgatatttgaa
tctgtctctttgaaaggacaccctgggtacatagctgtggatgaagtcagagtcctcgcc
cacccctgcagaaaagccccgcatttcctgcggctgcagaacgtggaggtgaacgtgggg
cagaatgccaccttccagtgcatcgccgggggaaagtggtcacagcacgacaagctctgg
ctccagcagtggaacgggagagacacagccctgatggtcactcgagtggtcaaccacagg
cgtttctcggccacggtcagcgtggccgacacgtcgcagcgcagcatcagcaagtaccgc
tgcgtcatccgctccgacggcggctccggcgtctccaactacgccgagctcatcgtcaaa
gagcctcccaccccgatcgcgccgccggagctgctggccgtgggcgccacgtacctgtgg
atcaaacccaacgccaactccatcatcggggacgggcccatcatcctcaaggaggtggag
tacaggaccaccacgggcaactgggcagagacccacatcgtggactctcccaactacaag
ctgtggcacctggaccctgacgtggagtacgagatccgggtgctgctgacgcgccccggg
gaagggggcacggggccccccggaccccccctcaccaccaggaccaagtgtgcagacccc
gtgcacgggccgcagaacgtggaggtggtggacatccgctcgcggcagctgacgctgcag
tgggagcccttcggctacgccgtgacgcgctgccacagctacaacctcaccgtgcactac
cagtacgtcttcaaccagcagaaattcgaggcagaggagctcatccaaacttcttcccac
tacaccctccgagggctccggcccttcatgaccatcaggttgaggttggctctctccaac
cccgagggcaaaatggaaagcgaggagctggtggtgcagactgaggaggatgttcctgga
cccgttcctttggaatctatccaaggaggaccttttgaagagaagatctatgttcagtgg
aagcctccaaatgagacaaatggcatcattacactctatgagatcacctacaaggccgtt
gggtctctggatcccagcgctgacctgtccagccaacgagggaaagtcttcaagctccgg
aacgaaacccatcacctttttgtaggattgtacccaggcactacctactcattcaccatc
aaagccagcacagtcaagggctttgggccacccatcaccaccaggattgcaaccaagatt
tcagcaccgtccatgcccgagtacgacacggactctcccctcaatgagacggacaccacc
atcacggtcatgctgaagcctgctcagtcccggggagcacctgtcagtgtctaccagctc
gttgtcaaggaggagaagctgcagaaagcccggagagctgcagacatcatcgagtgcttc
tctgtgccagtgagctacaagaacgcctccagcctggactccccacactactttgcagct
gagctgaagcccatcaacctccctgtcacacagcccttcaccgtgggcgacaacaagacc
tacaatggctactggaatgctcctctttcccccctgaaaagctacagcatatacttccag
gctcttagcaaggccaatggagaaacaaaaatcaactgtgtccggctggcaacaaaagca
gtgataggtagacaacaggcgaccacgcgaaacccgcccagcctcttgagcacaggagct
tccacccagaattccaatgcagtggaacctgaaaagcaagttgacagcacagtgaaaatg
gctggagttatagctggtctcctgatgtttgttattatcctcttgggagcaatgcttacc
atcaaaagaaggatattttgttcatctgactggctgtcaatatttagaagaaatgcatat
tcctactcctattacttgcattcaagccagtgttttaggggcctctctgtcttctacagg
accaggaagctagccaagaagcagaaggagactcagaccagcacgcagagggagatgggt
cctgtggctacttctgacaagacctccaccaaactcagtgctgttcacaatgaagaagct
ttttcttccagctgccaagatgttaatggattcacatcaccctctccttgttcattttct
gtccaaagcaaaacccttcagagcaaatctatgttgaattcctactactcagtttcatca
gacaccgtcccatcgaccacgctgttagacagcagccacggcgagctggcccagccaacc
ctgaccatccagacccacccgtaccgcagctgcgagcccgtggagatgtcctacccccgg
ggacagttccagcccgccatccgagtggcagacctgctgcagcacatcacccagatgaag
aggggacagggctatggcttcaaggaggagtatgaggcactccctgaggggcagactgcg
tcctgggacacggccaaggaagatgagaaccgcaacaagaacagatatggaaacataatc
tcctatgatcactcaagagtgaggctgcagctgctggatggggaccctcactctgactac
atcaacgccaattacatcgacgggtaccatcggcctcgccattacattgctactcaaggg
ccgatgcaagagacagtgaaggatttctggagaatgatttggcaagaaaactctgcgagt
gttgtcatggtcaccaacctggtggaagtgggcagggtgaagtgtgttcgatactggcca
gatgacacagaagtctatggagatattaaagtcacattaattgagacagagccattggca
gagtatgtcatacgtaccttcactgtccaaaagaaaggctaccatgagatccgagagatt
cggcagttccacttcaccagctggccggaccacggcgtgccctgctacgccacggggctc
ctgggcttcgtccgccaggtgaagttcctcaacccccccgaggcaggacccatcgtggtg
cactgcagtgctggggccgggaggacagggtgctttattgccattgacatcatgctggac
atggcagagaacgagggcgtggtggatatattcaactgcgtgcgggagctgcgctcccaa
agggtcaatttggtgcagacagaggagcagtacgtgtttgtccatgatgccattttggag
gcatgtctctgtggcaacacagccattccagtctgtgagttcagatccatatattacaac
atcagcagactggatccacagaccaattccagccagataaaagatgagtttcagaccctg
aacatcgtgacgccgcgggtgcggccggaggactgcagcatcgggctgctgccccgcaac
cacgacaagaaccgctgcatggacgtgctgcccctggaccgctgcctgcccttcctcatc
tccgtggatggggagtccagcaactacatcaatgctgcactcatggatagccacaagcag
cctgctgccttcattgtcacccagcaccccttgcccaacaccatcacagacttctggagg
ctggtgtttgattacaactgctcctccgtggtgatgctcaacgagatggatgcagcacag
ctctgcatgcagtactggccagagaagacgtcctgttgttatggcccaatccaggtggag
tttgtttcagcagacattgatgaagatatcatcaaccggatattccggatttgcaacatg
gccaggccgcaggacgggtaccgcatcgtgcagcacctgcagtacatcggctggccggcc
tacagggacacccctccctccaagcgctccctgctgaaggtggtcaggaggctggagaag
tggcaggagcagtacgacggcagagacgggcgcaccgtggtccactgcctgaacggtgga
gggcgcagcggcaccttctgtgccatctgcagcgtgtgcgagatgatccaacagcagaac
atcatcgacgtgttccacatagtgaaaacgctacggaataacaaatccaacatggtggag
tcactggaacagtataaatttgtatacgaggttgcactggaatacttgagttccttttag
DBGET
integrated database retrieval system
