Taeniopygia guttata (zebra finch): 100231556
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Entry
100231556 CDS
T01082
Symbol
CDH4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100231556 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tgu04515
]
100231556 (CDH4)
Cell adhesion molecules [BR:
tgu04515
]
Cadherins
Major cadherins
100231556 (CDH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_4
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
100231556
NCBI-ProteinID:
XP_030144908
Ensembl:
ENSTGUG00000007909
UniProt:
H0ZCA6
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All DBs
Position
20:complement(10541027..10959578)
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AA seq
918 aa
AA seq
DB search
MSAGPRRRLLLLLLLLPGWGSAAAHNGDLTVRPTCKPGFSEQDYTAFISQNIMEGQKLLK
VKFNNCAGNKGVRYETNSLDFKVRADGTLYAAHHLQLPSKQLILVVTAWDPQSLGRWEAM
VRFLVAEKSQHNGHKPKGRKALPGELVQQQSDTLLPWRQHQSANGLRRQKRDWVIPPINV
PENSRGPFPQQLVRIRSDKDKEIHIRYSITGVGADQPPMEVFNIDPVSGRMYVTRPMDRE
ERASYHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMT
VTANDADDGTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYIVI
VQATDMEGNLNYGLSNTATAIITVTDVNDNPPEFTTSTYSGEVPENRVEVVVANLTVMDR
DQPHSPNWNAIYRIISGDPSGHFTIRTDPVTNEGMVTVVKAVDYEMNRAFMLTVMVSNQA
PLASGIQMSFQSTAGVTISVTDVNEAPYFPTNHKLIRLEEGVPTGTVLTTFSAVDPDRFM
QQAVRYSKLSDPANWLNINATNGQITTAAVLDRESDYIKNNVYEATFLAADNGIPPASGT
GTLQIYLIDINDNAPELLPKEAQICEKPNLNVINITAADADIDPNVGPFVFELPSVPSAV
RKNWTITRLNGDYAQLSLRIMYLEAGVYDVPIIVTDSGNPPLYNTSVIKVKVCPCDENGD
CTTIGAVAAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRD
NILKYDEEGGGEEDQDYDLSQLQQPETMDHVLNKTPGVRRVDERPIGAEPQYPIRPVIPH
PGDIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLND
WGPRFKKLADMYGGGEED
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccggcccgaggcgacgcctgctgctgctgctgctcctcctgcccggctggggc
tcggcggcggcacacaatggggatcttacagttagacccacatgcaagcctggcttctca
gaacaagactacacagctttcatctcccagaatatcatggaagggcagaagttactcaaa
gtaaaatttaataactgtgccggtaacaagggcgtgcggtacgaaaccaacagcctggac
ttcaaggtgagggcggacgggaccctgtacgccgcccaccacctgcagctgccctccaag
cagctgatcctggtggtgaccgcctgggacccccagagcctgggcagatgggaggccatg
gtcaggtttctggtggcagagaagtcccagcacaacggacacaagcccaaaggaaggaag
gcactgcctggagagctggtgcagcagcagagtgacaccctgctgccgtggcggcagcac
cagagtgccaacgggctgcggcggcagaagcgggactgggtcatcccacccatcaacgtg
ccagagaactccagagggcccttcccgcagcagctggtccggatccgttccgataaggac
aaggagatccatatcaggtacagcatcactggagtgggagccgaccagccgcccatggag
gtcttcaacatcgaccccgtgtctggcaggatgtacgtgacacgcccgatggacagggag
gaaagagcttcctaccacctccgggctcatgcagtggatatgaatggaaacaaggtggag
aatcccattgacctttacatctatgtgattgatatgaatgacaacaggccggagttcatc
aaccaagtctataatggatctgttgatgaaggctctaaaccagggacatacgtgatgacg
gtgacggcgaacgacgcggatgacggcaccacggccaacgggatggtgaggtaccgcatc
gtcacgcagaccccgcagagcccctcgcagaacatgttcaccatcaacagcgagacaggc
gacatcgtcaccgtggccgctgggctggacagggagaaagttcagcagtacatagtcatt
gttcaagcaacagatatggaaggaaatctgaactatggtctctccaacacagccacagcg
atcattacagtgacagatgtcaatgacaacccccctgaattcaccaccagcacttattca
ggagaagtgcctgagaacagagtggaggttgtggtggcaaacctgacggtgatggaccgg
gaccagccccactctcccaactggaacgccatctaccgcatcatcagcggggacccctcg
ggccacttcaccatccgcaccgaccccgtcaccaacgagggcatggtcaccgtggtgaag
gcagttgattacgagatgaacagagctttcatgctgacagtgatggtatcaaaccaagct
cccctggccagtggcatccagatgtccttccagtcgacagcaggagtcaccatttcggtc
acagatgtcaacgaagccccgtatttcccaacgaaccacaagctgatcaggctggaggaa
ggggtgccgacgggcacggtgctgaccacgttttcggcggtggatcccgatcgcttcatg
cagcaggcagtaagatactccaagctgtcagatcctgcaaactggctgaacattaatgcc
acaaatggtcagatcactactgctgctgtccttgatcgagagtcagactacattaagaat
aatgtctacgaggccacattcttggcggctgacaacggaattccccctgccagcggcacg
ggcactctgcagatctacctgatcgacatcaacgacaacgccccggagctgctgcccaag
gaggcgcagatctgtgagaagccaaacctcaatgtcatcaacatcacggccgcggacgct
gacatcgatccaaacgtggggcccttcgtcttcgagctgccaagtgtgccatctgcagtg
aggaagaactggaccatcacacggctcaatggggactatgcccagctcagtttgcggatc
atgtacctggaagcaggagtgtacgatgtgcccatcatcgtgacagactcaggaaacccc
cccttgtacaacacctctgtcatcaaggtgaaggtgtgcccgtgtgacgagaacggcgac
tgcaccaccatcggggccgtggctgctgcagggctgggcacgggggccatcattgccatc
ctgatctgcatcatcatcctcctgaccatggttctgctcttcgtggtgtggatgaagcgc
cgggagaaggagcgccacaccaagcagctcctcatcgaccccgaggacgacgtccgggac
aacatcctcaagtacgacgaagagggaggtggagaggaggatcaggattacgatttaagc
cagctccagcagccagagaccatggatcacgtgctgaacaagacacctggagtcagaagg
gtggatgaaagacctattggtgctgaaccacagtatcctataagaccagtaatcccacat
ccaggggatattggtgattttattaatgagggcctgcgtgcagcagacaacgaccccaca
gcccccccctacgactccctgctggtctttgactacgagggcagcggctccaccgccggc
tccgtcagctccctcaactcctccagctccggggaccaggactacgactacctgaacgac
tgggggcccaggttcaagaaactggcagacatgtacgggggaggagaggaagattaa
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