Taeniopygia guttata (zebra finch): 100231566
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Entry
100231566 CDS
T01082
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100231566 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100231566 (NUP160)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100231566 (NUP160)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100231566 (NUP160)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100231566 (NUP160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
100231566
NCBI-ProteinID:
XP_030131250
Ensembl:
ENSTGUG00000007581
LinkDB
All DBs
Position
5:9858094..9884276
Genome browser
AA seq
1394 aa
AA seq
DB search
MAAALAARSCLELSAAGRAPPRPPQELLFVPPGVAPLPAGRYGDSAGGFCYQESAQLGAA
TRNRWVRWSTSGDTVELMEESLDVNLLNNAVRLRIQGCPFLPGGIHLCEVQSHLVVLLLT
AQTVHRLLLPHPARLYRSELITESQVQSVFTDISKIHIRDPSNYYVIPSVPGLAPNSVAS
AAWLSSEGEALFALPSASGGIFVLKLPPPDAPGSVSVVELKQSSVVQRFLTGWMPTAIRG
DGGPSDVPVSLSVHCLDHDAFLFALCQDHKLRMWSYKDQMCLMVADLLEFMPVSRDLRLA
AGTGHRLRLAFSQSLGLYLGVYMHAPKRGQFCVFQLVSTESNRYSLDHISSLFSSQETLV
DFALTSAEIWALWHNEENQTVVKYINFEQNVAGQWNQVFVQPLPEEEVTVRQDQDPREIY
LEYLFMPGRFTNAAIQKALQIFSQGTERHMDLTWDELRKEVTLAVENEFQGSVTEYECSP
EEFWQLQVEFWSKFYACCLQYQEALSRPLALHLNPYTSMVCLLKKGSMSFLVPCSLVDHL
YLLSNEHFLTEDDAAIFEDLEMSRDVVCLVQCLRLIGESISMEMAFIMEMACSRLQPPEK
AAEQILENLIANDTENVMEDIHSKLQEIRNPIHAIGLLIREMDYETDADMERAPHLALRM
SLSQLFGSSTAAHVVCGGVAKICTVRFLLCRDLLILQQLLLRLGDPMVLGGGQLFQSQQD
LLHRTSPLLLSYFLIRWASQCLASDVPVDTLESNLQHLSVLELADTTALTPHKLVSGPQT
IVELFFQEVARKHIISRLFLQPNTSLAETSLNWPHLITSIVADFLPLLWPSNPSFLFPEC
LMGSCQYTQLQEYIRLLQPWCHVNIGSCCFMMGRCYLVMGEGHKALDCFCQAASEVGREE
FLDRLIQPEEGEVVSTPRLQYYNKVLRLLEMLGLPELVIELATLAIMESADDWRSQATLR
TCIFKHHLDLGHNSEAYVALTQNPDPSRQLDCLRQLVVVLCERSQLQDLVEFPYVNLHNE
VVGIIESHARAVDLMTHNYYELLYAFHVYRHNYRKAGTVMFEYGMRLGREVRTLRGLQKQ
GNCFLAAINCLRLIRPEYAWIVQPASGAVYERPGASPKRSHDGECMAVPTTHQIEILELE
DLERECLLARIRLTLVEHDVSAAAVAGNSTPEETVSLLVRAGLFDSAITLCQTFKLPLTP
IFEGLTFKCIKLQLGGEAAQAKAWDWLAANQLSALVTTKESSATDEAWRLLSSYLERYPS
QNSLYHRCVINKLLAHGIPLPNWLINSYKEVDAAELLRLYLSYDLLEEAVDLVLEYVDAV
LGKGHQYFGIEVPLSPVSPTMWLPYTAIDQLLQALRESSASENSVVLYEKLNDKMEDYQQ
KVSVATTERLYCRP
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctctggcggcgcggagctgcctggagctgagcgcggccggccgggccccg
ccgcgacccccgcaggagctgctcttcgtgccccccggcgtcgccccgctccccgccggg
cgctacggcgacagcgccggcggcttctgctaccaggagagcgcgcagctcggggccgcc
accaggaatcgctgggtgcgatggagcacgtcgggggacacggtggagctgatggaggag
tccctggacgtgaacctgctgaacaacgctgtgcggctgcggatccagggctgcccgttc
ctgccgggcgggattcacctgtgtgaggtgcagagtcacctggtggtgctgctgctcacg
gcacagacggtgcaccggctgctgctcccgcaccccgcccgcctctaccgcagcgagctg
ataacggagagccaagtgcagtctgtgtttacagatatcagcaaaatccacatcagggat
ccctccaattactacgtgattcccagcgtgccggggctggctcccaactctgtggcctct
gcagcctggctgagcagcgagggagaggctctctttgccctcccctctgcctcaggaggg
atctttgtccttaagctgcctcctcccgatgctcctgggagtgtttctgtcgtggagttg
aagcagagctcggtggtgcagcgtttcctcacaggctggatgccaactgccatcagaggt
gatggtggcccctcagatgtgcccgtcagcctctccgtgcactgcctggatcacgatgcc
ttcctcttcgccctctgccaagaccataagctccggatgtggtcctacaaggatcagatg
tgcctgatggtggcggatctgctggaattcatgccggtcagcagggacctgcggctggca
gctggcaccgggcaccgcctgcgcctggccttctcccagtccctgggcctgtacctggga
gtctacatgcacgctcccaagcgagggcagttttgtgtcttccagctggtgagcactgag
agcaaccgctacagccttgaccacatctcctccctgttctcctcacaggagactttggtt
gactttgccttaacctcagccgagatctgggcgctctggcacaacgaggagaatcaaact
gttgtgaaatacatcaactttgagcagaatgttgcaggtcagtggaaccaggtgtttgtg
cagccgctccctgaggaggaggtgacagtccggcaggatcaggaccccagggaaatctac
ttggaatatctcttcatgccgggtcggttcactaatgcagctatccagaaggctttgcag
atcttttctcaaggaactgagaggcacatggatctgacatgggatgaattaaggaaagag
gtcaccttagctgtggaaaatgagttccagggcagcgtgacagaatacgagtgctcccca
gaggagttttggcagttgcaggtggaattctggtccaagttctatgcctgctgcctgcag
taccaggaagctctttcccggcccctggccttgcacctgaacccctacaccagcatggtg
tgcctgctaaagaagggctccatgtccttccttgtgccctgctccttggttgatcatctc
tatctcctctccaacgagcacttcctgaccgaggatgatgctgccatctttgaagatttg
gagatgtctcgtgatgttgtctgtcttgtccagtgccttcgcctgattggagaatcaatt
tctatggaaatggcattcatcatggaaatggcttgctcccgcctccagcctccagaaaag
gctgcagagcagatcctggagaacttgatagctaatgacacggaaaatgtgatggaggat
attcacagcaaactgcaggagatcaggaaccccatccatgccattggattgctcatccga
gagatggactacgagacagacgctgacatggaaagagctccgcacctggcgctgcgcatg
agcctgtcccagctgtttggcagcagcactgctgcgcacgtggtgtgcgggggggtggcc
aagatctgcaccgtccgcttcctcctctgccgggacctgctcatcctccagcagctcctg
ctgcgcctcggagatcctatggttttgggagggggacagctcttccagtcccagcaggac
ttgctgcaccgcacctctcccctgctgctgtcctacttcctgatccggtgggcgagccag
tgcctggcctctgacgtccctgtggacacattggaatctaatctgcagcatctctccgtg
ttggagttagcagacaccacggccctgacaccacacaaactggtatccggccctcagaca
atcgtggagctcttctttcaggaagtggccagaaaacacatcatatcccgactcttcctg
caaccaaacacctctttggctgagacaagtttgaactggccccaccttatcacctcaata
gtggctgattttcttcctctcctatggcccagcaatcccagcttcctcttcccagagtgc
ctgatggggagctgtcagtacacccagctccaggaatatatccgactgctgcagccatgg
tgccacgtgaacataggctcctgctgctttatgatgggcaggtgctaccttgtcatgggt
gaagggcacaaggctttggattgcttctgccaagctgcctctgaggtgggaagagaggag
ttcctggacaggctgatccagcccgaggagggtgaggtggtctccacgccacgcctgcag
tactacaacaaggtccttcgcttgttggagatgctgggtttgccagagctggtcatcgag
ctggccaccctggccatcatggaatcagcagatgactggaggagccaggctactttaagg
acctgcatcttcaaacatcatttggatttggggcacaacagtgaagcctatgtagcctta
acacaaaacccagatccaagcaggcagctggactgcctacgccagctagtggtggttctc
tgcgagcgatcccagctccaggacctggtggaatttccttacgtgaacctgcacaatgag
gtcgttgggatcatcgagtcccatgctcgggctgtggatctgatgactcacaactactac
gagctgctctacgctttccatgtgtaccggcacaactaccggaaagctggaacggtgatg
tttgagtacggcatgcggctgggcagggaggtgcggacgctccgagggctccagaaacag
gggaattgtttcctggctgccattaactgcctgcggctgatccgcccagaatacgcctgg
atagtgcagccagcctctggagctgtgtatgagcgcccaggagcgtctccgaagaggagc
cacgatggggagtgcatggctgttcccaccactcaccagattgagatcctggagctggag
gatttggagagggagtgtctgctggcgcggatccggctcaccctggtagaacacgacgtg
tcagcagcagctgtggcaggcaactccacgcccgaggaaacagtgtctctgctggtccgg
gccgggctcttcgactcggccatcaccctctgccaaaccttcaagctgcccttgacaccc
atctttgagggcctgaccttcaagtgcatcaagctccagctgggaggggaagcggcacag
gccaaggcctgggactggctggcagccaaccaactctcagccctggtcaccaccaaggag
tccagtgccacagatgaagcctggaggctgctgtcatcctacttggagcgttacccatcc
cagaacagcctgtaccatcgctgtgtcatcaataagctcctggcacatgggatacctctg
cccaactggctcattaacagctacaaggaagtggatgctgccgagctgctgcgcctgtac
ctgagctacgatctgctggaggaggctgtggatttggtcctggagtatgtggatgctgtg
ctgggcaaaggtcaccagtattttgggatcgaggtccctctgtccccagtgtcccccacg
atgtggcttccctacactgccattgaccagctgctgcaggcgctgcgggagagcagcgcc
agcgagaacagtgtcgtgctctacgagaagctgaacgacaagatggaggactaccagcag
aaggtcagcgtggccaccacggagcgcctgtactgccggccctag
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