Taeniopygia guttata (zebra finch): 100231711
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Entry
100231711 CDS
T01082
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100231711 (SOX2)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100231711 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100231711
NCBI-ProteinID:
XP_002196639
Ensembl:
ENSTGUG00000010554
LinkDB
All DBs
Position
9:complement(18160912..18163631)
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AA seq
315 aa
AA seq
DB search
MYNMMETELKPPAPQQTSGGGTGNSNSAANNQKNSPDRVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYTLPGGLLAPGTNTMTTGVGVGATLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQ
HPGLNAHNAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSMGS
VVKTESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSAP
VPGTAINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctgaagcctcccgccccccagcaaacttcgggggga
ggcacaggcaactccaactcggccgccaacaaccagaagaacagcccggaccgggtcaag
cgcccgatgaacgcgttcatggtgtggtcccgcgggcagcggcggaaaatggcccaggag
aacccgaagatgcacaactccgagatcagcaagcggctcggggcggagtggaaactttta
tccgaggcggagaagagacccttcattgacgaagccaagcggctcagagctctgcacatg
aaggagcacccggattataaataccgaccccggaggaaaaccaagaccctcatgaagaag
gataagtacacgttgccggggggcttactggcaccgggcaccaataccatgacgactggg
gtaggggttggggccaccttgggagctggggtgaaccagaggatggacagttacgcgcac
atgaacggctggaccaacggaggctatgggatgatgcaagagcagctcggctacccgcag
cacccgggcttgaacgcgcacaacgcggcgcagatgcagcccatgcaccgctacgacgtg
agcgccctgcagtacaactccatgaccagctcgcagacttacatgaacggatcgcccacc
tacagcatgtcctactcccagcaagggaccccgggcatggccctgggctccatgggctcg
gtggtcaagacggaatccagctccagtccccccgtagtcacttcctcgtctcattcgagg
gctccttgccaagctggggaccttcgggacatgatcagcatgtatctaccaggtgctgaa
gtaccagaaccagctgccccaagcagacttcatatgtcccaacactaccagagtgcacct
gttcctggcacagccattaatggcacactccctctatcacatatgtaa
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