| Entry |
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| Symbol |
HELZ
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| Name |
(RefSeq) probable helicase with zinc finger domain isoform X1
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| KO |
| K25168 | helicase with zinc finger domain [EC:5.6.2.-] |
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| Organism |
tgu Taeniopygia guttata (zebra finch)
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| Brite |
KEGG Orthology (KO) [BR:tgu00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:tgu03019]
100231759 (HELZ)
Messenger RNA biogenesis [BR:tgu03019]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
100231759 (HELZ)
3'-5' decay
Other 3'-5' decay factors
100231759 (HELZ)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
18:complement(3536452..3621959)
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| AA seq |
1942 aa
MADRRPEKACEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEPCQAELDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSLRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWHFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNGILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTSRILICTHSNSAADLYIKDYLHPYVEAGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQ
LDLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
FRIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGI
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANPTKQQQSPPKGKVHHHNQNDH
FPPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNMVMSVPLPVPWTGYQGRFAVDPCLITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPV
SLGQQQLPHQDKEQHEQTRNGKSENTAGPEISKIRTPEKKPLESKQVDLEANPQQRSPES
RSSVGYPNAKFHRKDNPNPRQLNLHLTPPHSQFAVPSRHFQHLSQLPRQPYPLQQQQQNL
LSQQQNHLPEQPNQMPPQQSQVVQQHNHLNQQPPPPSQLSPAFQAGPSQSFFNNPIPHRP
HSPAVDAVISEQHPPPLLQEVNNPLRPIAQHNPVLPTHLNNFIEENPSGMPLGDALDRMH
GNVALETIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQQQVRAN
WKLASNTEDETEATYSRFQDLLRELSHRDAGESRDGAEMPPPQSRLLQYRQVQPRSPPAL
PSPSCNSNHSAHFPNFTENSRDIELPTNPAFQQHLPQMYNPPFSMPSEHITPSPLKYLQP
DGSWTYANLQQNHLLGQGFHYGIPPLPHRSQQSPFIQIQNHQHAVGQEPFHPLASRAVSA
SSLHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSNQSSFNYS
SPELWVNSSSSAPYPNIPCNGASRAVPARELLAPPKAAKPPEEHLKAENIQLSNSFNYNV
LQHLGQFPPLMPNKQLVESNSSSPQPAGGTKPVMSYASALRAPPKPKPPPEQTKKNSDPL
SLFQELSLGSSSGSNGFYSYFK |
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| NT seq |
5829 nt +upstreamnt +downstreamnt
atggcagacagaagaccagagaaggcatgtgaacaagcatgtgaatcccttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggagccctgccaggcagaactcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaagtatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggccaagggcgatggatctctccgggcagtgctctgc
tgcatgcatctcaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggggaatcactgaacgggatggtaactaaagatctcacgcgactgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccatcaggatatcatgtagaagatttagaagaaggg
tcacgggatggttggcacttccgcccccctcccaggggtgtcaccagcagtgaggagtac
acactgtgtaaaagatttttagagcaagggatctgcaggtatggtgcccagtgtacttca
gcacattcccaggaagagctgacagaatggcagaaacgatacgcttcccgcttgatccgc
ttgaaacagcagaaggaaaacaagcagtgctcgggcagttacatggaaaccctcattgag
aaatggatgaattccttatctcctgagaaagtgcttagtgaatgtgtagaaggagtgaga
gtagaacataatcccgagctctcagtaactgtcaccaccaaaaagtctcaccagacatgg
acatttgctctcacatgtaagcctgcaagaatgctgtatcgagtggcattgctttatgat
gcccaccgaccacactttagtatcgttgcaatatctgctggagacagcactacccaggta
tcacaagaagttccagaaaactgtcaggaatggataggaggaaagatggtccagaatgga
atagatcactatatatacaaagtcagtatagcctttaatacagaaatctttgggactttt
cgccaaactgtggtgtttgactttggattagaaccagtcctcatgcaacgagtgatgatt
gatgctgcttcaactgaagaccttgaatacctgatgcacgcacggcaacagctcctgacc
acagccaagcgttgggattccacctccaagactattgtggagtttgagcctaatgaaact
actgaattggagaagagccttctcaccagataccaaatccctctgtctgctgaccagctg
ttcacacaatctgtcctggacaaatcattgaccaagaccaactatcagtcacggctccat
gacctcctgtatattgaggaaatagcacagtataaggaagttagcaagttcaacataaaa
gtgcaattgcagattgtagcaagcttcatgctcactggtgtttctggaggtgcaaaatat
gcccaaaatggacaactttttggtcgctttaagctcactgagacgctctctgaagacact
ttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gaaaagtcagcacagacccaaggaaccaaagagaaggtttatgaagcagctatcgaggag
aagacaaaggattatattttcttgagggtatccagggagtgctgcgaggagctgaatctt
cgggcagattgtgaaatgcaggttgagcttcagttccagttgaaccggttacccctctgt
gaaatgcattatgccttggacaggattaaggacaatggcattttgtttccagatgtcagc
atgactcccaccataccctggagtcccaacaggcaatgggatgagcagttggaccctcgg
ctgaacgcgaagcagaaagaggctgttctggctattaccaccccactctccatacagctg
cctcctgttcttatcatcggtccctatgggacaggaaaaaccttcactctggctcaggca
gtcaagcacatcctccagcagcaggacaccagcaggattctcatttgcacccattctaat
agtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccc
caggcaagacctctcagggtatatttccgaaatcgctgggtaaagactgttcacccagtt
gtgcatcagtactgtttgatttcaagcacacattccacctttcagatgccacagaaagaa
gacattcttaagcaacgagtagtagttgttactttaaatacatcacagtacctatgtcag
ctggatcttgaaccagggttttttacacacattctgctagatgaagctgctcaagctatg
gagtgtgaaacgattatgcctctagcattagctaacaaaaacacaagaattgtcttggca
ggagaccatatgcagctcagtccttttgtctacagtgaatttgccagggagagaaacctt
catgtttccttgctcgaccggctctacgagcactaccctgccgagttcccgtgcaggatc
ctgctctgtgagaactatcgctcccatgaagcaatcatcaattacacatccgaacttttc
tatgaaggcaaattgatggcaagtggaaagcagccagcacacaaagatttctaccctttg
acgttcttcacagcacgtggagaagatgtgcaagaaaaaaatagtacagctttttacaat
aatgcagaggtgtttgaagtggtggagcgtgtggaggagctgaggaggaagtggccagtg
gcctggggcaagctggacgacggcagcatcggggtggtgaccccgtacgctgaccaggtg
ttccgcatccgcgccgagctgcgcaagaagcgcctgtccgacgtcagcgtggagagggtg
ctcaacgtgcagggaaaacagttcagagttttgttcctcagcacagtacgaacacggcac
acatgcaaacataagcaaactccaattaaaaggaaagagcagttactggaggattcaaca
gaagacttggattatggttttctttctaattacaaacttctcaacactgccattacaaga
gcacaatccttggtagctgtggttggagatcctattgctttatgttccattggaagatgc
aggaaattctgggaaaggtttattgccctgtgccacgagaacgaaagtcttcatggcatc
acgtttgagcagatcaaagctcagctggaagctctggagttaaagaaaacctacgtgttg
aaccctctggcccccgagttcatcccccgagctctgcggcatcagcactcagccaacccc
accaaacagcagcagtcacctccaaagggcaaggtccatcatcataaccagaatgaccat
ttcccacctgatggaattgttcagcccaatccttctgttctaattggaaatcctatccga
gcatatactcctccccctcctcctctgggacctcaccccaatctggggaaatctccaagt
cctgttcaaaggatagatccacacactgggacaagtattctatatgtacctgctgtctat
ggaggaaatatggtcatgtctgtgcctttgcctgtaccgtggacggggtatcagggtagg
tttgcagtcgacccttgcctcattactcaccaagcagccatggcatataacatgaacctg
ttacaggcacacgggcgagggtctccgatcccgtatggcctgggccaccactcccctgtt
agcctgggacagcagcagctcccacaccaggacaaggagcagcacgaacaaactcgaaat
ggtaaaagcgaaaacactgctggacctgaaatcagtaaaattcgaacacctgagaagaaa
cctctggaatccaagcaggttgatttagaagcaaaccctcagcagagaagcccagagtcc
cgttccagtgttggttaccccaatgctaaattccaccgcaaagacaaccccaaccccagg
cagctgaacctgcacctgaccccgccccactcccagttcgcagttcccagccgccacttc
cagcacctctcccagctcccgaggcagccctaccctctgcagcagcagcagcaaaacctc
ttaagccaacagcaaaatcacttgcctgaacagcccaaccaaatgccaccccagcagagc
caggtagttcagcagcataatcacttgaatcagcagcctccaccaccttcgcagctttcc
cctgctttccaggcaggtcccagccagtccttttttaataatcccattccccaccgacca
cattctcctgctgtagatgctgtgatttcagaacaacaccccccacctctgttacaagaa
gtcaataatcctttgaggcctattgcacagcacaacccagttctgccaacccacttgaac
aacttcattgaagagaatccatcaggaatgcccttaggggacgctttagatcgtatgcat
ggaaatgtagctttggaaacaataaggcagcaacaacaagccaggttacagcaatggaat
gaacataatgcctatctcagtcaaggcactattccatatcaacaccatcaccatcctcat
ctaccacatcttcctcagcaaccaattggattacatcaacagcagcaagttagggcaaac
tggaaacttgccagtaatacagaagatgaaacagaggcaacatattcaagattccaggac
ttgctccgggagctgtcgcaccgcgatgcaggcgagagccgggacggggccgagatgcct
cccccccagtcgagactgttgcaatacagacaagtgcagccccggagcccaccagcactc
ccttctccctcctgcaactccaaccacagcgcccacttccccaacttcactgagaacagc
agagacattgaactgcccactaacccagcatttcagcagcatttaccccaaatgtacaac
ccccctttctcaatgccatccgaacacataaccccgtctcccttgaaatacctgcaacct
gatgggtcctggacttatgctaacctccagcagaatcacctcctggggcagggctttcac
tatggaatacctccactgccccacaggtctcagcaaagcccttttatacaaatccagaat
catcagcacgcagtcggtcaggagccatttcatccactcgcatctcgagcagtttctgct
tcttcgctccacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtaccaa
agaagaatttcctctagttcagtccaggcttgttctgaagaattaagcactcctcaagac
agtcttggtcagtgtaaagagcttcaggaccacagtaaccagtcatcgttcaactactcc
tcccctgagctgtgggtgaactcctcctcctctgccccgtacccaaacattccatgcaac
ggagccagcagagccgtcccagcccgggagctgctagctcccccgaaggcggccaagccc
ccggaggaacacctgaaggccgagaacatccaactctccaactccttcaactacaacgtg
ctccagcatctgggccagttcccccctctgatgcccaacaagcagctggtggagtccaac
agcagcagcccccagcccgcgggcggcaccaaacccgtcatgtcctacgccagcgctctg
cgggctccccccaagcccaaacctcctcctgagcagacaaaaaagaacagcgaccccctg
tccttgtttcaggaacttagcctaggtagttcatcaggtagcaatggcttttactcctat
tttaaataa |
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