Taeniopygia guttata (zebra finch): 100231890
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Entry
100231890 CDS
T01082
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100231890 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100231890 (SIN3A)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
100231890 (SIN3A)
REST complex
100231890 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100231890 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
100231890
NCBI-ProteinID:
XP_030137494
Ensembl:
ENSTGUG00000003761
LinkDB
All DBs
Position
10:1695189..1727072
Genome browser
AA seq
1320 aa
AA seq
DB search
MQGNPRAPRAPINFPAIFIASRIPLLVLTWQTLTFGFVVLPEHEFSMKRRLDEQESPVYA
SQQRRITSSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTPSYQVSAVPQSSGSH
GPAIAAVHGGHHHPAPVQPHGSQVVQSHTHPTPPAVPVQGQQQFQRLKVEDALSYLDQVK
LQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEV
QTNDMVNVTTPGQVHQIPTHGLQPQPQPQPPHPSQPSAQSTPTPAQPAPQPTPAKISKPS
QLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQPVEFNHAINYVNKI
KNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLS
EFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRPNQNGCQIRRHSGTG
ATPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEAYENFLRCLVIFNQE
VISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETYPKERATEGIAMEIDYASCKR
LGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCE
DERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIY
ADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQG
INFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSLAYEDKQILEDAASL
IIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEEEEMDVDEATGAAKK
HNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLHQILCLRLLRICTQA
ERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYYPAFLDMVRNLLDGN
MDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLYLSENSNGAT
GGLLASQSSRTLLEAAYQRKAEQLMSEENCFKLMFIQSRGQVQLTIELLDTEEENSDDPV
EAERWSDYVERYINSDSTSPELREHLAQKPVFLPRNLRRIRKCQRGREQQEKEGKEGNSK
KSMENLESLDKMECKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSHERVSKRLHQRFQAW
VDKWTKEHVPREMAAETNKWLMGEGLEGLVPCTTTCDTETLHFVSINKYRVKYGTIFKTP
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaaacccgagagctcctcgtgcacccattaattttcctgcgatttttatagcg
agccggatccctctgctcgtcctcacttggcagacgcttacgtttggttttgttgtgctt
cccgagcatgagttcagcatgaagcggcgattggatgagcaggagtcacccgtgtatgcg
tcgcagcagagacgtatcaccagcagcaccgaggctttcccgcaccagcaccgcgtgctc
gccccggccccgccggtctatgaggctgtttccgagaccatgcagtcggccacggggatc
cagtactccgtaactcccagctaccaggtgtcggccgtgccgcagagctcgggcagccac
gggccggccatcgccgccgtgcacggcggccaccaccaccccgcgcccgtgcagccccac
ggcagccaggtggtgcagagccacacgcaccccacgccccccgccgtgcccgtgcagggc
cagcagcagttccagcggctcaaggtggaggatgcattgtcttaccttgaccaggtgaag
ctacagtttggtagtcagccacaggtctacaatgacttcttggatataatgaaggaattt
aaatctcaaagcatcgacactccgggggtgatcagccgtgtgtcgcagctcttcaagggc
cacccagacttgatcatgggcttcaacaccttcctgccacctggctacaagattgaggtg
cagaccaatgacatggtgaacgtgaccaccccggggcaggttcaccagatccccacccac
gggctgcagccccagccgcagccgcagccgccgcatccgtcgcagccttcggcgcagtca
accccaacaccagcacagccggcaccacagcccacacctgccaaaatcagcaagccatcg
cagttgcaggctcatactcctgccagccagcagacccccccgatcccgccgtacgcgtcg
ccgcgctcgccgccggtccagccgcacacgcctgtgacaatctctctgggcaccacacca
tccctgcagaacaatcagcccgtggagtttaaccacgccatcaactatgtcaacaagatc
aaaaatcggttccagggacagccagacatctacaaagccttcctggagattctccatacg
tatcagaaagagcagcgtaatgccaaggaggcaggagggaactacacaccagctctgaca
gagcaggaggtctatgcccaggtggctcgtctcttcaagaaccaggaggatctgctctca
gaatttgggcaattcctgcctgatgccaacagctctgtgctgttaagtaagacaactgca
gagaaagtggaatcggtcaggaatgaccacgggggcacagtgaagaagccacagctcaac
aacaagcagcagagacccaaccagaatggctgccagatccgacggcactcgggcactgga
gcaacccctccggtgaagaagaaaccaaagctgcttggtttgaaagaccagtctttggca
gaagccagcaaacatggtgtggggacagaatctctcttctttgagaaggtccgcaaagct
ctgcgtagcacagaggcatatgagaacttcctgcgctgcctggtgattttcaaccaggag
gtgatctcccgagctgagctcgtgcagctggtctctccattcctggggaaattcccagaa
ctgttcacttggtttaaaaactttctgggatataaggagtctgttcacatggagacgtat
ccgaaggaacgggctactgaggggattgccatggagattgactatgcctcctgcaagagg
ctgggctccagctaccgagccttgcccaagagctaccagcagcccaagtgcacggggaga
actccactgtgtaaagaggttttgaatgacacctgggtctccttcccatcctggtctgaa
gattccacatttgtgagctccaagaagacacaatatgaagagcacatctacaggtgtgag
gacgagcgttttgagctggatgttgtcttggagaccaacctggcaaccatccgcgttctc
gaggcaatccagaagaagctgtctcgtttgtctgcggaggagcaggccaaattccggctg
gacaacaccctggggggcacctcggaggtgatccaccgcaaggctctccagaggatatac
gctgacaaggcagccgacatcatcgatgggcttcgcaagaacccatcagtggctgttccc
atcgtgctgaaaaggttaaagatgaaagaggaagagtggcgagaagcccagagaggattt
aataaagtctggcgagagcagaatgagaagtattacctgaaatccttggaccaccagggc
atcaacttcaagcagaatgataccaaggtcctaaggtcaaagagtctcctcaatgagatt
gaaagcatctatgatgagaggcaagaacaggcttcagaagacaatgctggagtccccaca
ggcccacacctctcactcgcctatgaagacaagcagatcctggaagatgctgcctctctc
atcatccaccatgtgaagcggcagacaggaatccagaaagaggacaagtacaaaatcaag
cagatcatgtatcacttcattccagacctgctgtttgctcagcgaggtgaactctcggat
gtggaagaggaagaggaagaggaaatggatgtggatgaagctactggggctgcaaaaaag
cacaacggtgttgggggtagtcctcccaaaaccaagctgatgttcaacaacacgacagcc
cagaagctgcggggcatggatgaggtctacaacctcttctacgtgaacagcaactggtat
atcttcatgaggctgcaccagatcctgtgcttgcggctgctgcggatctgcacccaggcc
gagcggcagatcgaggaggagacgcgggaacgggagtgggagagggaagtgctgggcata
aagcgagacaagagtgacagtcctgccatccagctgcgactgaaggagcccatggacatt
gatgttgaggattattacccggccttcctggacatggtgcgcaacctcctggacgggaac
atggactcgtcgcagtacgaggactcgctgcgcgagatgttcaccatccacgcctacatc
gccttcaccatggacaagctgatccagagcatcgtccgacagctccagcacatcgtgagc
gatgagatctgtgtgcaggtgacagacctgtacctgtcagagaacagcaatggagccaca
ggagggctcctggcgtcccagtcctcccgcacgctcctggaggccgcctaccagcgcaaa
gccgagcagctcatgtccgaggagaactgcttcaagctgatgttcattcagagcagaggt
caagttcagttaaccattgagctgctggacacagaagaggaaaactcagatgaccctgtg
gaagcagagcgctggtctgactacgtggagcggtacatcaactctgattctacctcccct
gagctccgcgagcacctggcccagaaacccgtcttcctgcccaggaatctgaggcggatc
cgcaagtgtcagcgtggtcgggagcagcaggagaaggaagggaaggaggggaacagtaag
aagtccatggagaacttggagagcctggacaagatggagtgtaaattcaagctgaactca
tataagatggtgtacgtgatcaaatcagaggattacatgtacaggaggaccgcgctgctg
cgagctcagcagtcccacgaaagggtgagcaagcggctgcaccagcggttccaggcctgg
gtggacaaatggaccaaggagcacgtgccccgcgaaatggcagccgagacaaacaagtgg
ctcatgggtgaaggcttggagggcttggtgccctgcaccaccacctgtgacacagagacc
ctgcactttgtcagcatcaacaagtaccgcgtcaaatacggcacgatattcaagacaccc
tag
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integrated database retrieval system
