Taeniopygia guttata (zebra finch): 100231940
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Entry
100231940 CDS
T01082
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100231940 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tgu03041
]
100231940 (RBM22)
Spliceosome [BR:
tgu03041
]
Complex B
Other components
Prp19-related factors
100231940 (RBM22)
Complex C
100231940 (RBM22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
100231940
NCBI-ProteinID:
XP_002198708
Ensembl:
ENSTGUG00000000850
UniProt:
H0YRG9
LinkDB
All DBs
Position
13:complement(12091328..12098608)
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AA seq
420 aa
AA seq
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MSTSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDEMPKSDVNKEYYTQN
MEREIANSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPSAV
VNIALPPPPGIAPPPPPGFGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccacatcgctgggctccaacacctacaaccgccagaactgggaggatgcggacttc
cctatcctgtgccagacgtgtcttggagaaaatccctatatccggatgaccaaagaaaaa
tatggaaaagaatgcaagatttgtgccaggcccttcacggtgttccgctggtgccccggg
gtgcggatgcgcttcaagaagacagaagtgtgccagacctgcagcaagctgaagaatgtc
tgtcagacctgcctgcttgacctggaatatggtttgcctattcaagtccgggatgcagga
ctctcccttaaggatgaaatgcctaaatctgacgtcaacaaagaatactacacccagaac
atggaacgagagatagccaattctgatggcactagaccagttggtgcactaggaaaagct
acttctaccagtgacatgctgctgaagctggcccgaaccactccgtactacaaacgcaac
cgtcctcacatctgttccttctgggtaaaaggagagtgcaaaagaggagaggagtgtccc
tacagacatgagaaacctacagatccagatgatcctctggctgaccagaacatcaaagat
cgttactatggaattaatgatcctgtggctgacaaacttctgaaacgagcatcaaccatg
cctcgtctagatcctcctgaagacaagactattactacactgtatgttggaggccttgga
gataccatcactgaatcagatctcagaaatcacttttaccagtttggagagatccggacg
ataacggtggtgcagaggcagcaatgtgctttcatccagtttgccaccaggcaggctgca
gaggtggctgctgagaaatccttcaacaaactcattgtcaacggccgcaggctcaatgtc
aaatggggaaggtcccaggcagcaagaggaaaagaaaaggacaaggaaggcactacagaa
tcggggataaagctggagccagttccaggacttcctggagccctcccccctcctccagct
gcagaagaggaggcttctgcaaattacttcaatctacctccaagtggcccctcagccgtg
gtgaacattgccctgccacctcctcctggcatcgctccaccgccgcctccaggttttgga
ccacacatgttccacgccatgggccccccacctcccttcatgagagccccaggccccatc
cactacccgtcccaggatccccagaggatgggtgcccacgcaggaaagcacagcagcccc
tag
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integrated database retrieval system