Taeniopygia guttata (zebra finch): 100231971
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Entry
100231971 CDS
T01082
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03030
DNA replication
tgu03410
Base excision repair
tgu03420
Nucleotide excision repair
tgu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100231971 (RFC2)
03410 Base excision repair
100231971 (RFC2)
03420 Nucleotide excision repair
100231971 (RFC2)
03430 Mismatch repair
100231971 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgu03032
]
100231971 (RFC2)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100231971 (RFC2)
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100231971 (RFC2)
DNA replication proteins [BR:
tgu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100231971 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
100231971 (RFC2)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100231971 (RFC2)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100231971 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
100231971 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
Mg_chelatase
AAA_24
Rad17
AAA_11
RuvB_N
AAA_assoc_2
nSTAND3
DNAX_ATPase_lid
AAA_19
MipZ
AAA_18
AAA_5
AAA_28
ABC_tran
AAA_30
AAA_25
AAA_23
NTPase_1
MeaB
RNA_helicase
SLFN-g3_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
100231971
NCBI-ProteinID:
XP_030143854
UniProt:
H0Z0B5
LinkDB
All DBs
Position
19:complement(7506337..7514184)
Genome browser
AA seq
356 aa
AA seq
DB search
MDVDMEEDEKAGPSAGEKRAPTDPAGAAPGGGSGHYELPWVEKYRPMKLSEIVGNEDTVS
RLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRN
KIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKII
EPIQSRCAVLRYTKLTDAQILARLLKIVEKEDVAYTDDGLEAIIFTAQGDMRQALNNLQS
TYSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAHLWRLGYSPEDVIGN
IFRVCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAAS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggatatggaggaggacgagaaggccgggccgtcggcaggagagaagcgggca
cccaccgaccccgcgggggctgcgcccggcggtggcagcggccactacgagctgccctgg
gtggaaaaatacagacccatgaaactgtctgaaatagttggaaatgaagatactgtgagc
aggttggaggtctttgcaaaagaggggaatgtaccaaatattataattgctggccctcca
ggaacaggtaaaaccaccagtatcctgtgtttggctcgtgctctccttggtcctgcgtta
aaggatgctgtgctggagctgaatgcctcaaatgacagaggcattgatgtcgtaagaaac
aaaatcaaaatgtttgcccagcaaaaggtcacacttccaaaaggtcggcataaaataatc
atccttgatgaagcagacagcatgacagatggagcacagcaagccttgagaagaacaatg
gaaatttattccaaaacaacacgcttcgcactggcgtgcaatgcctctgacaaaatcata
gaacctattcagtctcgctgtgcagtgctgcgttacaccaagctgacagatgcacaaata
cttgccaggctactgaaaattgtggagaaagaggatgtagcatatacagatgatggacta
gaagccattatcttcacagcccaaggtgatatgagacaggcattaaacaacttgcagtcc
acatactctggatttggctttataaatagtgaaaatgtctttaaggtatgtgatgagcct
catcctctgttggtgaaggaaatgatacaacactgcataaatgcaaatattgatgaagca
tacaagattcttgcccacctgtggcgccttggatactctccagaagatgtcattggcaat
atcttccgtgtgtgtaagacatttcaaatgccagaatatctgaaactggaatttatcaag
gaaattgggtacacccacatgaagatagcagaaggtgtgaactccctgttacaaatggct
gggctgctggcccgcctgtgccagaagactgcagcccctgcagccagctag
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