Taeniopygia guttata (zebra finch): 100231989
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Entry
100231989 CDS
T01082
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100231989 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100231989 (CSTF3)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100231989 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
100231989
NCBI-ProteinID:
XP_002196089
Ensembl:
ENSTGUG00000005010
UniProt:
H0Z3Q7
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All DBs
Position
5:complement(3714074..3763951)
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AA seq
718 aa
AA seq
DB search
MSGEGTAGDQTAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDARTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKLPDTVDEAVRII
TGGLPEIAVEGNGPVENNTILNKAVKRSHEDSDDDEEKGSVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagagggaaccgccggcgaccagactgctgaatatgtcccagaaaaagtgaag
aaagctgaaaagaaactagaagaaaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcagcctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttccccagttctggcagattctggaaactgtacattgaagcagagattaaagcaaaa
aattatgacaaagtggaaaagttatttcagcgctgccttatgaaggttttgcacattgat
ttatggaaatgttacctttcctatgtacgagaaaccaaggggaagctacctagttacaaa
gaaaaaatggctcaggcatatgattttgctctggataagattggcatggaaatcatgtca
taccagatctgggtggattacatcaattttttgaaaggcgtagaagcagtaggatcttat
gcagaaaaccagaggatcacagctgtccgtagggtttaccagcgtggttgtgtcaacccc
atgataaacatagagcagctctggagagattataacaaatatgaagagggcatcaatatt
cacttagccaagaagatgatcgaggacaggagtagagattatatgaatgcacgacgtgtg
gcgaaggagtacgagacggtgatgaagggcctggaccgcaacgctccctccgtgccccca
caaaacaccccccaggaggctcagcaggtggacatgtggaaaaagtacatccagtgggaa
aagagcaaccctctacgaacagaagaccaaactctcattacaaaaagagtgatgtttgcc
tatgagcagtgtctcctggtgctgggccatcacccagacatctggtatgaagcagctcag
tacctcgagcagtccagcaagctgctggctgagaaaggggacatgaacaatgctaagctt
ttcagtgatgaggctgctaatatttatgaaagagcgatcagcactttattaaagaagaat
atgcttctttattttgcatatgcagattatgaagagagccggatgaagtacgagaaagtg
cacagcatctacaaccggctcctggccatcgaggacatcgaccccacgctggtttatatc
cagtacatgaaatttgcaaggcgagcagaaggcattaaatccggaaggacgatatttaag
aaagcgagagaggatgcccggacccgccaccatgtctatgttactgcagctttaatggag
tattattgtagtaaggataagtctgtggcctttaagatttttgagctagggctgaaaaaa
tatggggacattccagaatatgtactggcatatatcgactacctttcccaccttaatgag
gacaacaatacaagagttttgtttgaacgtgttttaacttcagggagccttccacctgag
aaatctggggaaatctgggctcggtttttagcctttgaaagtaacattggggatctggcc
agcatcctgaaagtggaaaaacggaggtttacagccttcaaggaagaatatgagggcaaa
gaaacagctctgctggtggacaggtacaagttcatggatctgtacccttgctctgccagc
gagctgaaggcccttggttataaggatgtctcccgtgccaagctagcagcaataattcca
gaccctgtggttgcaccttccatcgtgcctgttctcaaggatgaagtagacaggaagcct
gaatatcccaaaccagacacccagcagatgattccatttcagccaagacacttagcacct
ccaggtttacatcctgtcccaggcggggtatttcctgttccaccagcagctgtagttctc
atgaagctcctgccacctcctatttgttttcagggtccctttgttcaagtggatgagctc
atggagatattcagaagatgcaaactgccagacactgttgacgaagccgtgcggataatc
acgggcggcctgcctgaaatagctgtggaaggcaatggacctgtggaaaacaacaccatt
ctcaacaaggctgtgaagagatcacatgaggattctgatgacgacgaggagaaaggatct
gtagttccccctgtacatgacatttacagagcacgacagcaaaagagaatccggtga
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