Taeniopygia guttata (zebra finch): 100232118
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Entry
100232118 CDS
T01082
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X2
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tgu03009
]
100232118 (DDX10)
Enzymes [BR:
tgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100232118 (DDX10)
Ribosome biogenesis [BR:
tgu03009
]
Eukaryotic type
90S particles
Helicases
100232118 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
100232118
NCBI-ProteinID:
XP_030126320
Ensembl:
ENSTGUG00000012605
UniProt:
H0ZQU5
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All DBs
Position
1:41680460..41834148
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AA seq
872 aa
AA seq
DB search
MDRPGGGGAAMDPVRSFERWKKKYTRRTNRLRLQRKERKRPEWQVERENIGRLVQRYPEI
NASEIQRFSDFPLSKKTLKGLQESQYRVVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAF
IVPALELLYRQQWTSADGLGVLIISPTRELAYQTFKVLRKVGKNHEFSAGLIIGGKDLKE
ESERIHHINMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENL
PKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYVVCELQQKVNM
LYSFLRTHLKKKTIVFFSSCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRMEVYTCFVR
KKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEALLVLLPSE
EKGMVEQLAQRKVPISEIKINPEKLTDIQKRLQAFLAQDQELKEKAQRCFVSYLRSVYLM
KNKEVFDVFKLPLAEYALSLGLAMAPRVRFLQRVRKQLCANEAANGEEHLEETEQNENAL
TLVNEETVEKCGTNFSGKTPVNKTKEKQRRKEAVECSVCSGSAEETGESEDESKELSEEE
EKEVDVPNRVPNPDSVQFFEDDDDDDENDTEGLDLLTVKQRDVFGVEAKDNPAPTTSKLK
MKKKATKTQEAKKILKKKFKVNTKIVFTEDGELVQQWPPVQKSNLAQADEEDDASGINLD
KAKEILREEDKFDKEEYRKKVKEKHREKRLKEKAARREARNKNAQAEEETVAFLDHSGSE
EEFDPSTLPDPDKYKDSDAEQDSESEDSYSELEEKIGRKKRSYSNSAIAEEMPRKRKKMQ
FSQEEDPCLPLDTGLSLAEDEELVLHLLNSHN
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggaccggcccggcggcggcggggccgccatggaccccgtacgcagcttcgagcgctgg
aagaagaaatacacccggcggacaaacaggctgcggctgcagcgcaaggagaggaagcgg
cccgagtggcaggtggagcgggagaacatcggccgcctggtgcagcgctaccccgagata
aatgcaagtgaaatccaaagattttcagattttccactttcaaagaaaacccttaaagga
ctgcaggaatctcagtatcgtgtggtaacagagatacagaggcaaaccataggtttggct
ttacaaggtaaagatgtacttggagctgcaaagactggatcaggcaaaacactggctttt
attgttccagctttggaactcctctatcgccagcagtggacttcagctgatggcctgggg
gttttgataatctcgcctacccgggagctggcatatcaaaccttcaaggttctgcgtaaa
gtggggaagaatcatgaattctcagctggccttatcattgggggaaaggatctgaaagaa
gagtctgaaagaatccaccacataaatatgctaatttgcactccaggacggcttttacaa
cacatggatgaaacttcatatttctatgcatctgatctgcaaatgttgattcttgatgaa
gctgacagaattctagacatggggtttgctgatacaatgaatgcaatcatagaaaattta
cctaagaagcgccagactttgcttttttctgcaacgcaaacaaaatctgtgaaggatctt
gcacggctgagtctgaaagatccagaatatgtttgggttcatgagaaagccaaattcagt
accccagcaactctggatcagaactatgttgtctgtgagcttcagcaaaaagtaaacatg
ttatactctttcctgagaactcatttgaaaaagaagaccattgtgtttttttcaagctgt
aaagaggttcagtatctcttcagagtgttttgtaagcttcagcctggtcttcccgtcctg
gcactccatggcaagcagcagcagatgaagagaatggaagtctacacttgttttgttcgg
aaaaaggcagcagtgctttttgctacagatatcgcagctcgtggcctggattttccagca
gtgaattgggtcattcagtttgattgtccagaagatgcaaacacatacatccatagagtg
ggaagaacagccaggtacaaagaaggtggtgaagctttgttagtattgcttccttcagaa
gaaaaagggatggtggaacagctggcacagaggaaagtacctatcagtgaaatcaaaatt
aatcctgaaaaacttacagacattcaaaagaggctgcaagcattcttagctcaagatcag
gagttaaaagagaaagctcaaaggtgttttgtatcctacttgcgttcagtttacttaatg
aagaacaaggaagtatttgatgttttcaaattgcctctagcagaatatgccctgtcactt
ggtcttgcaatggcacctcgtgtgagattccttcaaagggttcggaagcagctttgtgcg
aatgaggcagccaatggggaagagcacttggaggagacagagcaaaatgagaatgctctc
accttggtaaatgaggaaacagtggagaaatgtggaactaatttcagtggaaaaacacct
gttaataaaacaaaggaaaaacagagaagaaaagaagctgtggaatgttctgtttgcagt
ggaagtgctgaggagactggtgagtctgaggatgaatcgaaagagctgtctgaggaggag
gaaaaagaagttgatgtacctaacagggtaccaaacccagactccgtgcagttctttgaa
gatgatgacgatgatgacgagaacgatactgaaggtcttgatttgctgacagtcaaacaa
cgcgatgtttttggtgtggaagctaaagataatccagcaccgaccacatcaaaattaaag
atgaagaaaaaagcaactaagacccaagaagccaaaaaaatcttgaagaagaaatttaaa
gttaacacaaaaatagtttttactgaagatggagagttagtgcagcagtggccacctgtg
caaaaatccaatttggcgcaagcagacgaggaagatgatgccagtggtatcaacctagat
aaagcgaaagaaatcctgcgtgaggaagacaaatttgacaaagaagaatacaggaagaaa
gtaaaggaaaaacatagggagaagaggctaaaagaaaaagcagcaagaagagaagccagg
aataagaatgcacaggctgaagaggaaactgtggcctttcttgatcacagtggaagtgaa
gaagagtttgatccaagcactctcccagatcctgataaatacaaagactctgatgcagag
caggattcagaaagtgaagacagctatagtgaacttgaggagaagattggaagaaagaag
agaagctatagcaacagtgccatagcagaagaaatgccacggaaaagaaagaaaatgcaa
ttcagccaagaggaggacccctgtctgccattagatactgggctttctctggcagaggat
gaagagcttgtattgcatctgctcaacagtcacaactaa
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